RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 FBXO24O75426 580 aa11.52□□□□□ -0.57
COL27A1-203ENST00000468565 HBZP02008 142 aa11.52□□□□□ -0.57
COL27A1-203ENST00000468565 MBPP02686 304 aaPredicted RBP11.52□□□□□ -0.57
COL27A1-203ENST00000468565 GAPDHP04406 335 aaKnown RBP11.52□□□□□ -0.57
COL27A1-203ENST00000468565 POLR2GP62487 172 aaKnown RBP eCLIP11.52□□□□□ -0.57
COL27A1-203ENST00000468565 DIAPH2-AS1Q14236 149 aa11.52□□□□□ -0.57
COL27A1-203ENST00000468565 FAM219AQ8IW50 185 aa11.52□□□□□ -0.57
COL27A1-203ENST00000468565 DRAM1Q8N682 238 aa11.52□□□□□ -0.57
COL27A1-203ENST00000468565 OR1S2Q8NGQ3 325 aa11.52□□□□□ -0.57
COL27A1-203ENST00000468565 MRPL30Q8TCC3 161 aaKnown RBP11.52□□□□□ -0.57
COL27A1-203ENST00000468565 SECTM1Q8WVN6 248 aa11.52□□□□□ -0.57
COL27A1-203ENST00000468565 IGHV3-43A0A0B4J1X8 118 aa11.51□□□□□ -0.57
COL27A1-203ENST00000468565 TUSC2O75896 110 aa11.51□□□□□ -0.57
COL27A1-203ENST00000468565 SNRNP70P08621 437 aaKnown RBP11.51□□□□□ -0.57
COL27A1-203ENST00000468565 IGHV3-43DP0DP04 118 aa11.51□□□□□ -0.57
COL27A1-203ENST00000468565 RCC1P18754 421 aaPredicted RBP11.51□□□□□ -0.57
COL27A1-203ENST00000468565 IL3RAP26951 378 aa11.51□□□□□ -0.57
COL27A1-203ENST00000468565 S100GP29377 79 aa11.51□□□□□ -0.57
COL27A1-203ENST00000468565 GNRHRP30968 328 aa11.51□□□□□ -0.57
COL27A1-203ENST00000468565 TMEM268Q5VZI3 342 aa11.51□□□□□ -0.57
COL27A1-203ENST00000468565 TBC1D26Q86UD7 250 aa11.51□□□□□ -0.57
COL27A1-203ENST00000468565 C11orf44Q8N8P7 122 aa11.51□□□□□ -0.57
COL27A1-203ENST00000468565 ZNF439Q8NDP4 499 aa11.51□□□□□ -0.57
COL27A1-203ENST00000468565 OR4A4PQ8NGN8 299 aa11.51□□□□□ -0.57
COL27A1-203ENST00000468565 TP53RKQ96S44 253 aa11.51□□□□□ -0.57
COL27A1-203ENST00000468565 SPIN2AQ99865 258 aa11.51□□□□□ -0.57
COL27A1-203ENST00000468565 SPIN2BQ9BPZ2 258 aa11.51□□□□□ -0.57
COL27A1-203ENST00000468565 TMEM222Q9H0R3 208 aa11.51□□□□□ -0.57
COL27A1-203ENST00000468565 TAF9BQ9HBM6 251 aa11.51□□□□□ -0.57
COL27A1-203ENST00000468565 KCNIP1Q9NZI2 227 aa11.51□□□□□ -0.57
COL27A1-203ENST00000468565 MOB4Q9Y3A3 225 aa11.51□□□□□ -0.57
COL27A1-203ENST00000468565 ST8SIA3O43173 380 aa11.5□□□□□ -0.57
COL27A1-203ENST00000468565 JTBO76095 146 aa11.5□□□□□ -0.57
COL27A1-203ENST00000468565 CDS2O95674 445 aa11.5□□□□□ -0.57
COL27A1-203ENST00000468565 AMY1AP04745 511 aa11.5□□□□□ -0.57
COL27A1-203ENST00000468565 HLA-DRB3P79483 266 aa11.5□□□□□ -0.57
COL27A1-203ENST00000468565 TMEM95Q3KNT9 176 aa11.5□□□□□ -0.57
COL27A1-203ENST00000468565 RPL7L1Q6DKI1 246 aaKnown RBP11.5□□□□□ -0.57
COL27A1-203ENST00000468565 ZNF880Q6PDB4 577 aa11.5□□□□□ -0.57
COL27A1-203ENST00000468565 ZNF600Q6ZNG1 722 aa11.5□□□□□ -0.57
COL27A1-203ENST00000468565 SLC25A48Q6ZT89 311 aaKnown RBP11.5□□□□□ -0.57
COL27A1-203ENST00000468565 MOB1BQ7L9L4 216 aa11.5□□□□□ -0.57
COL27A1-203ENST00000468565 ZNF695Q8IW36 515 aa11.5□□□□□ -0.57
COL27A1-203ENST00000468565 CMTM1Q8IZ96 169 aa11.5□□□□□ -0.57
COL27A1-203ENST00000468565 OR1L1Q8NH94 360 aa11.5□□□□□ -0.57
COL27A1-203ENST00000468565 SAT2Q96F10 170 aaPredicted RBP11.5□□□□□ -0.57
COL27A1-203ENST00000468565 GNG12Q9UBI6 72 aa11.5□□□□□ -0.57
COL27A1-203ENST00000468565 FBXL17Q9UF56 701 aa11.5□□□□□ -0.57
COL27A1-203ENST00000468565 PLXNB1O43157 2135 aa11.5□□□□□ -0.57
COL27A1-203ENST00000468565 PIGBOS1A0A0B4J2F0 54 aa11.5□□□□□ -0.57
COL27A1-203ENST00000468565 IGHV1-3A0A0C4DH29 117 aa11.5□□□□□ -0.57
COL27A1-203ENST00000468565 DUXBA0A1W2PPF3 345 aa11.5□□□□□ -0.57
COL27A1-203ENST00000468565 ZNF705EA8MWA4 302 aaPredicted RBP11.5□□□□□ -0.57
COL27A1-203ENST00000468565 TMEM11P17152 192 aa11.5□□□□□ -0.57
COL27A1-203ENST00000468565 P2RY1P47900 373 aa11.5□□□□□ -0.57
COL27A1-203ENST00000468565 ZNF137PP52743 207 aa11.5□□□□□ -0.57
COL27A1-203ENST00000468565 FAM53AQ6NSI3 398 aaPredicted RBP11.5□□□□□ -0.57
COL27A1-203ENST00000468565 SLC35G3Q8N808 338 aa11.5□□□□□ -0.57
COL27A1-203ENST00000468565 BPIFCQ8NFQ6 507 aa11.5□□□□□ -0.57
COL27A1-203ENST00000468565 ST6GALNAC6Q969X2 333 aa11.5□□□□□ -0.57
COL27A1-203ENST00000468565 TMEM56Q96MV1 263 aa11.5□□□□□ -0.57
COL27A1-203ENST00000468565 TMEM56-RWDD3S4R434 201 aa11.5□□□□□ -0.57
COL27A1-203ENST00000468565 TXNL1O43396 289 aa11.49□□□□□ -0.57
COL27A1-203ENST00000468565 SNAPINO95295 136 aa11.49□□□□□ -0.57
COL27A1-203ENST00000468565 CD28P10747 220 aa11.49□□□□□ -0.57
COL27A1-203ENST00000468565 HTD2P86397 168 aa11.49□□□□□ -0.57
COL27A1-203ENST00000468565 EBI3Q14213 229 aa11.49□□□□□ -0.57
COL27A1-203ENST00000468565 PRR18Q8N4B5 295 aa11.49□□□□□ -0.57
COL27A1-203ENST00000468565 OR10J5Q8NHC4 309 aa11.49□□□□□ -0.57
COL27A1-203ENST00000468565 JPT1Q9UK76 154 aa11.49□□□□□ -0.57
COL27A1-203ENST00000468565 BORCS7-ASMTA0A0B4J1R7 106 aa11.48□□□□□ -0.57
COL27A1-203ENST00000468565 IGKV1-6A0A0C4DH72 117 aa11.48□□□□□ -0.57
COL27A1-203ENST00000468565 SLC31A2O15432 143 aa11.48□□□□□ -0.57
COL27A1-203ENST00000468565 IGKV1D-33P01593 117 aa11.48□□□□□ -0.57
COL27A1-203ENST00000468565 IGKV1-33P01594 117 aa11.48□□□□□ -0.57
COL27A1-203ENST00000468565 HES1Q14469 280 aa11.48□□□□□ -0.57
COL27A1-203ENST00000468565 GNMTQ14749 295 aa11.48□□□□□ -0.57
COL27A1-203ENST00000468565 HMGN3Q15651 99 aa11.48□□□□□ -0.57
COL27A1-203ENST00000468565 IL34Q6ZMJ4 242 aa11.48□□□□□ -0.57
COL27A1-203ENST00000468565 ZNF818PQ6ZRF7 136 aa11.48□□□□□ -0.57
COL27A1-203ENST00000468565 MOB3BQ86TA1 216 aa11.48□□□□□ -0.57
COL27A1-203ENST00000468565 NDUFA11Q86Y39 141 aa11.48□□□□□ -0.57
COL27A1-203ENST00000468565 CLRN3Q8NCR9 226 aa11.48□□□□□ -0.57
COL27A1-203ENST00000468565 OR10V1Q8NGI7 309 aa11.48□□□□□ -0.57
COL27A1-203ENST00000468565 OR4D5Q8NGN0 318 aa11.48□□□□□ -0.57
COL27A1-203ENST00000468565 FAM110DQ8TAY7 271 aaPredicted RBP11.48□□□□□ -0.57
COL27A1-203ENST00000468565 NARS2Q96I59 477 aaKnown RBP11.48□□□□□ -0.57
COL27A1-203ENST00000468565 CABLES2Q9BTV7 478 aa11.48□□□□□ -0.57
COL27A1-203ENST00000468565 IGKV1D-13A0A0B4J2D9 117 aa11.48□□□□□ -0.57
COL27A1-203ENST00000468565 APOC3P02656 99 aa11.48□□□□□ -0.57
COL27A1-203ENST00000468565 IGKV1-13P0DP09 117 aa11.48□□□□□ -0.57
COL27A1-203ENST00000468565 ZNF134P52741 427 aa11.48□□□□□ -0.57
COL27A1-203ENST00000468565 SSTP61278 116 aa11.48□□□□□ -0.57
COL27A1-203ENST00000468565 BLOC1S1P78537 153 aa11.48□□□□□ -0.57
COL27A1-203ENST00000468565 MORN2Q502X0 79 aa11.48□□□□□ -0.57
COL27A1-203ENST00000468565 CT45A1Q5HYN5 189 aa11.48□□□□□ -0.57
COL27A1-203ENST00000468565 H1FOOQ8IZA3 346 aaPredicted RBP11.48□□□□□ -0.57
COL27A1-203ENST00000468565 SELENOHQ8IZQ5 122 aaKnown RBP11.48□□□□□ -0.57
COL27A1-203ENST00000468565 CT45A3Q8NHU0 189 aa11.48□□□□□ -0.57
COL27A1-203ENST00000468565 ABHD14BQ96IU4 210 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms