RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 OR8D2Q9GZM6 311 aa1.84□□□□□ -2.11
VPS13A-209ENST00000467124 WDR61Q9GZS3 305 aaKnown RBP1.84□□□□□ -2.11
VPS13A-209ENST00000467124 EFCAB1Q9HAE3 211 aa1.84□□□□□ -2.11
VPS13A-209ENST00000467124 HHLA3Q9XRX5 114 aa1.84□□□□□ -2.11
VPS13A-209ENST00000467124 PRELID3BQ9Y3B1 194 aa1.84□□□□□ -2.11
VPS13A-209ENST00000467124 ADGRB3O60242 1522 aa1.84□□□□□ -2.11
VPS13A-209ENST00000467124 MYO9BQ13459 2157 aa1.83□□□□□ -2.12
VPS13A-209ENST00000467124 SLIT2O94813 1529 aa1.83□□□□□ -2.12
VPS13A-209ENST00000467124 TMSB15BA0A087X1C1 80 aa1.83□□□□□ -2.12
VPS13A-209ENST00000467124 TRAV41A0A0B4J266 112 aa1.83□□□□□ -2.12
VPS13A-209ENST00000467124 A0A1B0GV50 99 aa1.83□□□□□ -2.12
VPS13A-209ENST00000467124 TMEM210A6NLX4 147 aa1.83□□□□□ -2.12
VPS13A-209ENST00000467124 HLA-DRB1P01911 266 aa1.83□□□□□ -2.12
VPS13A-209ENST00000467124 IFNA6P05013 189 aa1.83□□□□□ -2.12
VPS13A-209ENST00000467124 LGALS1P09382 135 aaKnown RBP1.83□□□□□ -2.12
VPS13A-209ENST00000467124 CCL5P13501 91 aa1.83□□□□□ -2.12
VPS13A-209ENST00000467124 DEFA3P59666 94 aa1.83□□□□□ -2.12
VPS13A-209ENST00000467124 RAB14P61106 215 aa1.83□□□□□ -2.12
VPS13A-209ENST00000467124 ERHP84090 104 aaKnown RBP1.83□□□□□ -2.12
VPS13A-209ENST00000467124 SLC38A11Q08AI6 406 aa1.83□□□□□ -2.12
VPS13A-209ENST00000467124 KRTAP6-3Q3LI67 103 aa1.83□□□□□ -2.12
VPS13A-209ENST00000467124 C1orf158Q8N1D5 194 aa1.83□□□□□ -2.12
VPS13A-209ENST00000467124 ZNF676Q8N7Q3 588 aa1.83□□□□□ -2.12
VPS13A-209ENST00000467124 ROPN1LQ96C74 230 aa1.83□□□□□ -2.12
VPS13A-209ENST00000467124 CHMP6Q96FZ7 201 aa1.83□□□□□ -2.12
VPS13A-209ENST00000467124 DNAJC30Q96LL9 226 aa1.83□□□□□ -2.12
VPS13A-209ENST00000467124 TXNDC17Q9BRA2 123 aa1.83□□□□□ -2.12
VPS13A-209ENST00000467124 C11orf68Q9H3H3 251 aaKnown RBP1.83□□□□□ -2.12
VPS13A-209ENST00000467124 NDUFB11Q9NX14 153 aa1.83□□□□□ -2.12
VPS13A-209ENST00000467124 TP73-AS1Q9UF72 201 aa1.83□□□□□ -2.12
VPS13A-209ENST00000467124 PSORS1C2Q9UIG4 136 aa1.83□□□□□ -2.12
VPS13A-209ENST00000467124 SLC22A13Q9Y226 551 aa1.83□□□□□ -2.12
VPS13A-209ENST00000467124 FAM215AQ9Y5M1 114 aa1.83□□□□□ -2.12
VPS13A-209ENST00000467124 MYO16Q9Y6X6 1858 aa1.83□□□□□ -2.12
VPS13A-209ENST00000467124 IGKV1D-43A0A0B4J1Z2 117 aa1.82□□□□□ -2.12
VPS13A-209ENST00000467124 TRAV38-1A0A0B4J264 116 aa1.82□□□□□ -2.12
VPS13A-209ENST00000467124 A0A0J9YW62 118 aa1.82□□□□□ -2.12
VPS13A-209ENST00000467124 OR4C46A6NHA9 309 aa1.82□□□□□ -2.12
VPS13A-209ENST00000467124 H3BRN7 92 aa1.82□□□□□ -2.12
VPS13A-209ENST00000467124 CREBL2O60519 120 aaPredicted RBP1.82□□□□□ -2.12
VPS13A-209ENST00000467124 SERPINA7P05543 415 aa1.82□□□□□ -2.12
VPS13A-209ENST00000467124 UCHL1P09936 223 aa1.82□□□□□ -2.12
VPS13A-209ENST00000467124 CTXN2P0C2S0 81 aa1.82□□□□□ -2.12
VPS13A-209ENST00000467124 HIST1H1TP22492 207 aaPredicted RBP1.82□□□□□ -2.12
VPS13A-209ENST00000467124 CD24P25063 80 aa1.82□□□□□ -2.12
VPS13A-209ENST00000467124 MSNP26038 577 aaKnown RBP1.82□□□□□ -2.12
VPS13A-209ENST00000467124 PSMD8P48556 350 aa1.82□□□□□ -2.12
VPS13A-209ENST00000467124 EIF2B2P49770 351 aaKnown RBP1.82□□□□□ -2.12
VPS13A-209ENST00000467124 TPI1P60174 286 aa1.82□□□□□ -2.12
VPS13A-209ENST00000467124 PSME3P61289 254 aa1.82□□□□□ -2.12
VPS13A-209ENST00000467124 SNRPD2P62316 118 aaKnown RBP1.82□□□□□ -2.12
VPS13A-209ENST00000467124 BASP1P80723 227 aaKnown RBP1.82□□□□□ -2.12
VPS13A-209ENST00000467124 CAV1Q03135 178 aa1.82□□□□□ -2.12
VPS13A-209ENST00000467124 ZNF791Q3KP31 576 aaPredicted RBP1.82□□□□□ -2.12
VPS13A-209ENST00000467124 SPOPLQ6IQ16 392 aa1.82□□□□□ -2.12
VPS13A-209ENST00000467124 C20orf196Q8IYI0 205 aa1.82□□□□□ -2.12
VPS13A-209ENST00000467124 Q9BRP9 147 aa1.82□□□□□ -2.12
VPS13A-209ENST00000467124 C14orf105Q9NVL8 296 aa1.82□□□□□ -2.12
VPS13A-209ENST00000467124 GLTPQ9NZD2 209 aa1.82□□□□□ -2.12
VPS13A-209ENST00000467124 IL36BQ9NZH7 164 aa1.82□□□□□ -2.12
VPS13A-209ENST00000467124 TIMM9Q9Y5J7 89 aa1.82□□□□□ -2.12
VPS13A-209ENST00000467124 MTUS2Q5JR59 1369 aa1.82□□□□□ -2.12
VPS13A-209ENST00000467124 SIPA1L1O43166 1804 aa1.82□□□□□ -2.12
VPS13A-209ENST00000467124 DCCP43146 1447 aa1.82□□□□□ -2.12
VPS13A-209ENST00000467124 NUP160Q12769 1436 aa1.82□□□□□ -2.12
VPS13A-209ENST00000467124 PXDNLA1KZ92 1463 aa1.82□□□□□ -2.12
VPS13A-209ENST00000467124 SCN9AQ15858 1988 aa1.81□□□□□ -2.12
VPS13A-209ENST00000467124 HIVEP2P31629 2446 aa1.81□□□□□ -2.12
VPS13A-209ENST00000467124 HECW2Q9P2P5 1572 aa1.81□□□□□ -2.12
VPS13A-209ENST00000467124 REREQ9P2R6 1566 aa1.81□□□□□ -2.12
VPS13A-209ENST00000467124 ARRDC5A6NEK1 342 aa1.81□□□□□ -2.12
VPS13A-209ENST00000467124 PGLYRP1O75594 196 aaPredicted RBP1.81□□□□□ -2.12
VPS13A-209ENST00000467124 CRYZL1O95825 349 aa1.81□□□□□ -2.12
VPS13A-209ENST00000467124 TMEM258P61165 79 aa1.81□□□□□ -2.12
VPS13A-209ENST00000467124 HBA1P69905 142 aa1.81□□□□□ -2.12
VPS13A-209ENST00000467124 ZNF90Q03938 601 aa1.81□□□□□ -2.12
VPS13A-209ENST00000467124 AKR1C1Q04828 323 aa1.81□□□□□ -2.12
VPS13A-209ENST00000467124 CDK10Q15131 360 aa1.81□□□□□ -2.12
VPS13A-209ENST00000467124 TPRXLQ17RH7 258 aa1.81□□□□□ -2.12
VPS13A-209ENST00000467124 LPCAT3Q6P1A2 487 aa1.81□□□□□ -2.12
VPS13A-209ENST00000467124 Q6ZS49 121 aa1.81□□□□□ -2.12
VPS13A-209ENST00000467124 LRRC25Q8N386 305 aaPredicted RBP1.81□□□□□ -2.12
VPS13A-209ENST00000467124 CDC26Q8NHZ8 85 aa1.81□□□□□ -2.12
VPS13A-209ENST00000467124 RNASE11Q8TAA1 199 aaKnown RBP1.81□□□□□ -2.12
VPS13A-209ENST00000467124 ZCCHC13Q8WW36 166 aaKnown RBP1.81□□□□□ -2.12
VPS13A-209ENST00000467124 PRAP1Q96NZ9 151 aa1.81□□□□□ -2.12
VPS13A-209ENST00000467124 OR52E6Q96RD3 313 aa1.81□□□□□ -2.12
VPS13A-209ENST00000467124 TIMM21Q9BVV7 248 aa1.81□□□□□ -2.12
VPS13A-209ENST00000467124 RNASE7Q9H1E1 156 aaKnown RBP1.81□□□□□ -2.12
VPS13A-209ENST00000467124 MRPL27Q9P0M9 148 aaKnown RBP1.81□□□□□ -2.12
VPS13A-209ENST00000467124 DICER1Q9UPY3 1922 aaKnown RBP1.81□□□□□ -2.12
VPS13A-209ENST00000467124 WDR90Q96KV7 1748 aa1.8□□□□□ -2.12
VPS13A-209ENST00000467124 CUL9Q8IWT3 2517 aa1.8□□□□□ -2.12
VPS13A-209ENST00000467124 SLX4Q8IY92 1834 aa1.8□□□□□ -2.12
VPS13A-209ENST00000467124 MPDZO75970 2070 aa1.8□□□□□ -2.12
VPS13A-209ENST00000467124 EVX1P49640 407 aa1.8□□□□□ -2.12
VPS13A-209ENST00000467124 AQP4P55087 323 aa1.8□□□□□ -2.12
VPS13A-209ENST00000467124 KRTAP12-3P60328 96 aa1.8□□□□□ -2.12
VPS13A-209ENST00000467124 ERVS71-1P61550 626 aa1.8□□□□□ -2.12
VPS13A-209ENST00000467124 POLR2GP62487 172 aaKnown RBP eCLIP1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms