RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 FOXA2Q9Y261 457 aaPredicted RBP11.32□□□□□ -0.6
DNMT3A-208ENST00000466601 IGKV1-5P01602 117 aa11.31□□□□□ -0.6
DNMT3A-208ENST00000466601 IGLV1-40P01703 118 aa11.31□□□□□ -0.6
DNMT3A-208ENST00000466601 ANXA3P12429 323 aa11.31□□□□□ -0.6
DNMT3A-208ENST00000466601 AKR1C2P52895 323 aa11.31□□□□□ -0.6
DNMT3A-208ENST00000466601 IFITM3Q01628 133 aa11.31□□□□□ -0.6
DNMT3A-208ENST00000466601 ASAH1Q13510 395 aa11.31□□□□□ -0.6
DNMT3A-208ENST00000466601 TMEM187Q14656 261 aa11.31□□□□□ -0.6
DNMT3A-208ENST00000466601 CXorf66Q5JRM2 361 aaPredicted RBP11.31□□□□□ -0.6
DNMT3A-208ENST00000466601 KHDC1LQ5JSQ8 128 aa11.31□□□□□ -0.6
DNMT3A-208ENST00000466601 ASPHD1Q5U4P2 390 aa11.31□□□□□ -0.6
DNMT3A-208ENST00000466601 MZT2BQ6NZ67 158 aa11.31□□□□□ -0.6
DNMT3A-208ENST00000466601 SLC25A42Q86VD7 318 aa11.31□□□□□ -0.6
DNMT3A-208ENST00000466601 NDUFA11Q86Y39 141 aa11.31□□□□□ -0.6
DNMT3A-208ENST00000466601 ZNF695Q8IW36 515 aa11.31□□□□□ -0.6
DNMT3A-208ENST00000466601 SELENOHQ8IZQ5 122 aaKnown RBP11.31□□□□□ -0.6
DNMT3A-208ENST00000466601 OR5M8Q8NGP6 311 aa11.31□□□□□ -0.6
DNMT3A-208ENST00000466601 LHFPL5Q8TAF8 219 aa11.31□□□□□ -0.6
DNMT3A-208ENST00000466601 FYTTD1Q96QD9 318 aaKnown RBP11.31□□□□□ -0.6
DNMT3A-208ENST00000466601 COMMD5Q9GZQ3 224 aa11.31□□□□□ -0.6
DNMT3A-208ENST00000466601 FLVCR2Q9UPI3 526 aa11.31□□□□□ -0.6
DNMT3A-208ENST00000466601 NSG2Q9Y328 171 aa11.31□□□□□ -0.6
DNMT3A-208ENST00000466601 TSSC4Q9Y5U2 329 aaPredicted RBP11.31□□□□□ -0.6
DNMT3A-208ENST00000466601 TNCP24821 2201 aa11.31□□□□□ -0.6
DNMT3A-208ENST00000466601 STAB1Q9NY15 2570 aa11.3□□□□□ -0.6
DNMT3A-208ENST00000466601 E7EUB6 86 aa11.3□□□□□ -0.6
DNMT3A-208ENST00000466601 SOX15O60248 233 aa11.3□□□□□ -0.6
DNMT3A-208ENST00000466601 TCRBP04435 133 aa11.3□□□□□ -0.6
DNMT3A-208ENST00000466601 APELAP0DMC3 54 aa11.3□□□□□ -0.6
DNMT3A-208ENST00000466601 PF4V1P10720 104 aa11.3□□□□□ -0.6
DNMT3A-208ENST00000466601 PSMB8P28062 276 aa11.3□□□□□ -0.6
DNMT3A-208ENST00000466601 SLC6A1P30531 599 aa11.3□□□□□ -0.6
DNMT3A-208ENST00000466601 NSUN5P1Q3KNT7 163 aa11.3□□□□□ -0.6
DNMT3A-208ENST00000466601 TMEM268Q5VZI3 342 aa11.3□□□□□ -0.6
DNMT3A-208ENST00000466601 TMEM65Q6PI78 240 aa11.3□□□□□ -0.6
DNMT3A-208ENST00000466601 LCNL1Q6ZST4 164 aa11.3□□□□□ -0.6
DNMT3A-208ENST00000466601 RNF152Q8N8N0 203 aa11.3□□□□□ -0.6
DNMT3A-208ENST00000466601 OR5T1Q8NG75 326 aa11.3□□□□□ -0.6
DNMT3A-208ENST00000466601 RNASE11Q8TAA1 199 aaKnown RBP11.3□□□□□ -0.6
DNMT3A-208ENST00000466601 RBPMSQ93062 196 aaKnown RBP11.3□□□□□ -0.6
DNMT3A-208ENST00000466601 RRNAD1Q96FB5 475 aaKnown RBP11.3□□□□□ -0.6
DNMT3A-208ENST00000466601 TMEM56Q96MV1 263 aa11.3□□□□□ -0.6
DNMT3A-208ENST00000466601 ZFP57Q9NU63 452 aa11.3□□□□□ -0.6
DNMT3A-208ENST00000466601 PRR13Q9NZ81 148 aa11.3□□□□□ -0.6
DNMT3A-208ENST00000466601 PRNDQ9UKY0 176 aa11.3□□□□□ -0.6
DNMT3A-208ENST00000466601 TMEM56-RWDD3S4R434 201 aa11.3□□□□□ -0.6
DNMT3A-208ENST00000466601 TENM1Q9UKZ4 2725 aa11.29□□□□□ -0.6
DNMT3A-208ENST00000466601 TEX50A0A1B0GTY4 177 aa11.29□□□□□ -0.6
DNMT3A-208ENST00000466601 FAM240BA0A1B0GVZ2 78 aa11.29□□□□□ -0.6
DNMT3A-208ENST00000466601 A0A1B0GW64 132 aa11.29□□□□□ -0.6
DNMT3A-208ENST00000466601 A0A1W2PRX2 142 aa11.29□□□□□ -0.6
DNMT3A-208ENST00000466601 HMX3A6NHT5 357 aa11.29□□□□□ -0.6
DNMT3A-208ENST00000466601 CGB1A6NKQ9 187 aa11.29□□□□□ -0.6
DNMT3A-208ENST00000466601 ADARB2-AS1A8MUL3 147 aa11.29□□□□□ -0.6
DNMT3A-208ENST00000466601 TEX22C9J3V5 150 aa11.29□□□□□ -0.6
DNMT3A-208ENST00000466601 SFT2D2O95562 160 aa11.29□□□□□ -0.6
DNMT3A-208ENST00000466601 RPLP1P05386 114 aaKnown RBP11.29□□□□□ -0.6
DNMT3A-208ENST00000466601 P0C879 139 aa11.29□□□□□ -0.6
DNMT3A-208ENST00000466601 VAMP1P23763 118 aa11.29□□□□□ -0.6
DNMT3A-208ENST00000466601 OR2B8PP59922 312 aa11.29□□□□□ -0.6
DNMT3A-208ENST00000466601 UBE2MP61081 183 aaKnown RBP11.29□□□□□ -0.6
DNMT3A-208ENST00000466601 PPP1R1AQ13522 171 aa11.29□□□□□ -0.6
DNMT3A-208ENST00000466601 IZUMO4Q1ZYL8 232 aa11.29□□□□□ -0.6
DNMT3A-208ENST00000466601 LGI3Q8N145 548 aa11.29□□□□□ -0.6
DNMT3A-208ENST00000466601 OR1L8Q8NGR8 309 aa11.29□□□□□ -0.6
DNMT3A-208ENST00000466601 OR4A16Q8NH70 328 aa11.29□□□□□ -0.6
DNMT3A-208ENST00000466601 IL22RA2Q969J5 263 aa11.29□□□□□ -0.6
DNMT3A-208ENST00000466601 KLK15Q9H2R5 256 aa11.29□□□□□ -0.6
DNMT3A-208ENST00000466601 FKBP11Q9NYL4 201 aa11.29□□□□□ -0.6
DNMT3A-208ENST00000466601 OR51B2Q9Y5P1 312 aa11.29□□□□□ -0.6
DNMT3A-208ENST00000466601 TET2Q6N021 2002 aaPredicted RBP11.28□□□□□ -0.6
DNMT3A-208ENST00000466601 A0A0G2JRQ6 117 aa11.28□□□□□ -0.6
DNMT3A-208ENST00000466601 C15orf61A6NNL5 157 aa11.28□□□□□ -0.6
DNMT3A-208ENST00000466601 M0QZ24 198 aa11.28□□□□□ -0.6
DNMT3A-208ENST00000466601 RAB9AP51151 201 aa11.28□□□□□ -0.6
DNMT3A-208ENST00000466601 RPL23AP62750 156 aaKnown RBP11.28□□□□□ -0.6
DNMT3A-208ENST00000466601 SRPXP78539 464 aa11.28□□□□□ -0.6
DNMT3A-208ENST00000466601 C2orf68Q2NKX9 166 aa11.28□□□□□ -0.6
DNMT3A-208ENST00000466601 FAM219AQ8IW50 185 aa11.28□□□□□ -0.6
DNMT3A-208ENST00000466601 TTC9CQ8N5M4 171 aa11.28□□□□□ -0.6
DNMT3A-208ENST00000466601 FAM110DQ8TAY7 271 aaPredicted RBP11.28□□□□□ -0.6
DNMT3A-208ENST00000466601 CASTOR1Q8WTX7 329 aa11.28□□□□□ -0.6
DNMT3A-208ENST00000466601 QTRT1Q9BXR0 403 aaKnown RBP11.28□□□□□ -0.6
DNMT3A-208ENST00000466601 C20orf85Q9H1P6 137 aa11.28□□□□□ -0.6
DNMT3A-208ENST00000466601 ZNF355PQ9NSJ1 428 aa11.28□□□□□ -0.6
DNMT3A-208ENST00000466601 TMEM14BQ9NUH8 114 aa11.28□□□□□ -0.6
DNMT3A-208ENST00000466601 ANK2Q01484 3957 aa11.27□□□□□ -0.61
DNMT3A-208ENST00000466601 DBX1A6NMT0 343 aa11.27□□□□□ -0.61
DNMT3A-208ENST00000466601 H3BUA1 57 aa11.27□□□□□ -0.61
DNMT3A-208ENST00000466601 RBMXL2O75526 392 aaKnown RBP11.27□□□□□ -0.61
DNMT3A-208ENST00000466601 OR4E1P0C645 316 aa11.27□□□□□ -0.61
DNMT3A-208ENST00000466601 TRAPPC2P0DI81 140 aa11.27□□□□□ -0.61
DNMT3A-208ENST00000466601 TRAPPC2BP0DI82 140 aa11.27□□□□□ -0.61
DNMT3A-208ENST00000466601 ANXA7P20073 488 aaKnown RBP11.27□□□□□ -0.61
DNMT3A-208ENST00000466601 THOC7Q6I9Y2 204 aaKnown RBP11.27□□□□□ -0.61
DNMT3A-208ENST00000466601 SLC35G3Q8N808 338 aa11.27□□□□□ -0.61
DNMT3A-208ENST00000466601 OR5B3Q8NH48 314 aa11.27□□□□□ -0.61
DNMT3A-208ENST00000466601 MYOZ3Q8TDC0 251 aa11.27□□□□□ -0.61
DNMT3A-208ENST00000466601 LSM10Q969L4 123 aaKnown RBP11.27□□□□□ -0.61
DNMT3A-208ENST00000466601 GPR146Q96CH1 333 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms