RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 HLA-DQB2P05538 268 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 NBEAP1P0C6P0 100 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 HIST1H1TP22492 207 aaPredicted RBP1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 MAP2K4P45985 399 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 CDK9P50750 372 aaKnown RBP1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 RBM11P57052 281 aaKnown RBP1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 TAS2R30P59541 319 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 TBPL1P62380 186 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 HIST1H3AP68431 136 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 SARNPP82979 210 aaKnown RBP1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 RPL19P84098 196 aaKnown RBP1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 H3F3AP84243 136 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 GNA12Q03113 381 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 PRDX4Q13162 271 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 PMAIP1Q13794 54 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 JOSD1Q15040 202 aaPredicted RBP1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 BATFQ16520 125 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 FAM201AQ5SY85 155 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 LPCAT3Q6P1A2 487 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 HIST2H3AQ71DI3 136 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 TMED4Q7Z7H5 227 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 TBC1D19Q8N5T2 526 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 ZNF283Q8N7M2 679 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 MRPS24Q96EL2 167 aaKnown RBP1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 PPP1R2P1Q96PQ5 205 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 TXNDC17Q9BRA2 123 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 DDA1Q9BW61 102 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 TRABDQ9H4I3 376 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 TAS2R7Q9NYW3 318 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 LSM5Q9Y4Y9 91 aaKnown RBP1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 V9GYQ6 96 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 MYH2Q9UKX2 1941 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 FHAD1B1AJZ9 1412 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 MYO9BQ13459 2157 aa1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 TMED7-TICAM2A0A0A6YYA0 188 aa1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 FAM236DA0A1B0GTK5 79 aa1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 OR4C46A6NHA9 309 aa1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 FNDC10F2Z333 226 aa1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 GNRH2O43555 120 aa1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 UCHL1P09936 223 aa1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 P0DMU3 169 aa1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 FAM231AP0DMU4 169 aa1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 FAM231CP0DMU5 169 aa1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 FAM236CP0DP71 79 aa1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 GABRA2P47869 451 aa1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 PSME3P61289 254 aa1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 TNFAIP6P98066 277 aaPredicted RBP1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 POU6F1Q14863 301 aa1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 LGALS9BQ3B8N2 356 aa1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 LIN52Q52LA3 116 aa1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 SBSNQ6UWP8 590 aa1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 C5orf46Q6UWT4 87 aa1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 PHF13Q86YI8 300 aaPredicted RBP1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 SLC35F6Q8N357 371 aa1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 OR52L1Q8NGH7 329 aa1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 RPS4Y2Q8TD47 263 aa1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 C12orf43Q96C57 262 aaKnown RBP1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 SFRP2Q96HF1 295 aa1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 CEP19Q96LK0 163 aa1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 CCL13Q99616 98 aa1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 SIGMAR1Q99720 223 aa1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 NDUFB11Q9NX14 153 aa1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 PKIGQ9Y2B9 76 aa1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 ROBO3Q96MS0 1386 aa1.82□□□□□ -2.12
CDC42BPA-211ENST00000466538 A0A087WUU8 490 aa1.81□□□□□ -2.12
CDC42BPA-211ENST00000466538 EXOC1LA0A1B0GW35 172 aa1.81□□□□□ -2.12
CDC42BPA-211ENST00000466538 GNG14A0A1W2PPG7 69 aa1.81□□□□□ -2.12
CDC42BPA-211ENST00000466538 FUOMA2VDF0 154 aa1.81□□□□□ -2.12
CDC42BPA-211ENST00000466538 C11orf86A6NJI1 115 aa1.81□□□□□ -2.12
CDC42BPA-211ENST00000466538 C9JCJ5 164 aa1.81□□□□□ -2.12
CDC42BPA-211ENST00000466538 OR7C1O76099 320 aaPredicted RBP1.81□□□□□ -2.12
CDC42BPA-211ENST00000466538 C1QBP02746 253 aa1.81□□□□□ -2.12
CDC42BPA-211ENST00000466538 ZNF728P0DKX0 622 aa1.81□□□□□ -2.12
CDC42BPA-211ENST00000466538 CDK10Q15131 360 aa1.81□□□□□ -2.12
CDC42BPA-211ENST00000466538 IAH1Q2TAA2 248 aaPredicted RBP1.81□□□□□ -2.12
CDC42BPA-211ENST00000466538 PABPC1L2AQ5JQF8 200 aa1.81□□□□□ -2.12
CDC42BPA-211ENST00000466538 LHFPL1Q86WI0 220 aa1.81□□□□□ -2.12
CDC42BPA-211ENST00000466538 DAND5Q8N907 189 aa1.81□□□□□ -2.12
CDC42BPA-211ENST00000466538 LHFPL5Q8TAF8 219 aa1.81□□□□□ -2.12
CDC42BPA-211ENST00000466538 SMCR5Q8TEV8 140 aa1.81□□□□□ -2.12
CDC42BPA-211ENST00000466538 RNASE6Q93091 150 aaKnown RBP1.81□□□□□ -2.12
CDC42BPA-211ENST00000466538 DIRAS2Q96HU8 199 aa1.81□□□□□ -2.12
CDC42BPA-211ENST00000466538 TTTY12Q9BZ98 90 aa1.81□□□□□ -2.12
CDC42BPA-211ENST00000466538 PCBD2Q9H0N5 130 aa1.81□□□□□ -2.12
CDC42BPA-211ENST00000466538 C19orf12Q9NSK7 152 aa1.81□□□□□ -2.12
CDC42BPA-211ENST00000466538 CMTM6Q9NX76 183 aa1.81□□□□□ -2.12
CDC42BPA-211ENST00000466538 ANGPT4Q9Y264 503 aa1.81□□□□□ -2.12
CDC42BPA-211ENST00000466538 NDUFAF1Q9Y375 327 aa1.81□□□□□ -2.12
CDC42BPA-211ENST00000466538 COQ4Q9Y3A0 265 aa1.81□□□□□ -2.12
CDC42BPA-211ENST00000466538 DOCK5Q9H7D0 1870 aa1.81□□□□□ -2.12
CDC42BPA-211ENST00000466538 CPDO75976 1380 aa1.81□□□□□ -2.12
CDC42BPA-211ENST00000466538 DCCP43146 1447 aa1.81□□□□□ -2.12
CDC42BPA-211ENST00000466538 STRCP1A6NGW2 1772 aa1.8□□□□□ -2.12
CDC42BPA-211ENST00000466538 TRPM6Q9BX84 2022 aa1.8□□□□□ -2.12
CDC42BPA-211ENST00000466538 ATG2BQ96BY7 2078 aa1.8□□□□□ -2.12
CDC42BPA-211ENST00000466538 TRGV5A0A0B4J1U4 118 aa1.8□□□□□ -2.12
CDC42BPA-211ENST00000466538 A0A1W2PQD3 144 aa1.8□□□□□ -2.12
CDC42BPA-211ENST00000466538 FGF6P10767 208 aa1.8□□□□□ -2.12
CDC42BPA-211ENST00000466538 CD79AP11912 226 aa1.8□□□□□ -2.12
CDC42BPA-211ENST00000466538 ZNF140P52738 457 aaPredicted RBP1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms