RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 C9orf152Q5JTZ5 239 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 FAM53AQ6NSI3 398 aaPredicted RBP5.47□□□□□ -1.53
CLDN4-204ENST00000466411 TEX38Q6PEX7 206 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 CENPVQ7Z7K6 275 aaPredicted RBP5.47□□□□□ -1.53
CLDN4-204ENST00000466411 TBC1D26Q86UD7 250 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 CENPSQ8N2Z9 138 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 OR4D10Q8NGI6 311 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 OR5M8Q8NGP6 311 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 MARCH1Q8TCQ1 289 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 ARPC1AQ92747 370 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 RRNAD1Q96FB5 475 aaKnown RBP5.47□□□□□ -1.53
CLDN4-204ENST00000466411 GALNT14Q96FL9 552 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 OR2A7Q96R45 310 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 COMMD5Q9GZQ3 224 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 TMEM222Q9H0R3 208 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 OR51J1Q9H342 316 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 SLA2Q9H6Q3 261 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 ZNF702PQ9H963 129 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 HRASLSQ9HDD0 168 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 PLSCR3Q9NRY6 295 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 PRNDQ9UKY0 176 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 GPR132Q9UNW8 380 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 SIGLEC9Q9Y336 463 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 TET2Q6N021 2002 aaPredicted RBP5.47□□□□□ -1.53
CLDN4-204ENST00000466411 PSMB11A5LHX3 300 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 CRYM-AS1A6NIL9 109 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 J3QRK9 145 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 ARPC1BO15143 372 aaKnown RBP5.46□□□□□ -1.54
CLDN4-204ENST00000466411 LYRM1O43325 122 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 TNFSF12O43508 249 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 SLC25A17O43808 307 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 UPK1BO75841 260 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 BRI3O95415 125 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 LY86O95711 162 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 AMY1AP04745 511 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 ELANEP08246 267 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 UCP1P25874 307 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 PAX6P26367 422 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 AKR1C2P52895 323 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 F2RL1P55085 397 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 RPL8P62917 257 aaKnown RBP5.46□□□□□ -1.54
CLDN4-204ENST00000466411 FOXE3Q13461 319 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 ASAH1Q13510 395 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 KIR3DS1Q14943 382 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 C2orf68Q2NKX9 166 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 PHLDA2Q53GA4 152 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 TMEM65Q6PI78 240 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 GLDNQ6ZMI3 551 aaPredicted RBP5.46□□□□□ -1.54
CLDN4-204ENST00000466411 H2BFWTQ7Z2G1 175 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 C5orf24Q7Z6I8 188 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 STPG2Q8N412 459 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 OR1L6Q8NGR2 347 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 OR5B3Q8NH48 314 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 RNASE11Q8TAA1 199 aaKnown RBP5.46□□□□□ -1.54
CLDN4-204ENST00000466411 TMEM167AQ8TBQ9 72 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 RBPMSQ93062 196 aaKnown RBP5.46□□□□□ -1.54
CLDN4-204ENST00000466411 R3HDM4Q96D70 268 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 C5orf30Q96GV9 206 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 CYYR1Q96J86 154 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 TMEM56Q96MV1 263 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 PDCD10Q9BUL8 212 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 NAA60Q9H7X0 242 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 ZFP57Q9NU63 452 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 SERTAD4Q9NUC0 356 aa5.46□□□□□ -1.54
CLDN4-204ENST00000466411 STARD9Q9P2P6 4700 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 TRAV41A0A0B4J266 112 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 A0A0G2JLM5 398 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 FAM240BA0A1B0GVZ2 78 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 NDUFB6O95139 128 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 CDS2O95674 445 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 CA2P00918 260 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 IGLV2-23P01705 113 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 SAA1P0DJI8 122 aaPredicted RBP5.45□□□□□ -1.54
CLDN4-204ENST00000466411 RPL30P62888 115 aaKnown RBP5.45□□□□□ -1.54
CLDN4-204ENST00000466411 RPL11P62913 178 aaKnown RBP5.45□□□□□ -1.54
CLDN4-204ENST00000466411 BLCAPP62952 87 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 FXYD3Q14802 87 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 BAK1Q16611 211 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 PRSS8Q16651 343 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 TRIM16LQ309B1 348 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 CXorf66Q5JRM2 361 aaPredicted RBP5.45□□□□□ -1.54
CLDN4-204ENST00000466411 OR4A47Q6IF82 309 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 ZNF429Q86V71 674 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 ZNF695Q8IW36 515 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 PUSL1Q8N0Z8 303 aaKnown RBP5.45□□□□□ -1.54
CLDN4-204ENST00000466411 LGI3Q8N145 548 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 Q8N1Y9 231 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 KLHDC1Q8N7A1 406 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 OR4A16Q8NH70 328 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 ENKURQ8TC29 256 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 ABHD5Q8WTS1 349 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 LSM10Q969L4 123 aaKnown RBP5.45□□□□□ -1.54
CLDN4-204ENST00000466411 PHB2Q99623 299 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 ALX4Q9H161 411 aaPredicted RBP5.45□□□□□ -1.54
CLDN4-204ENST00000466411 CDIP1Q9H305 208 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 FBXL15Q9H469 300 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 C5orf66Q9H5L9 145 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 PARP11Q9NR21 331 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 TMEM140Q9NV12 185 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 COA4Q9NYJ1 87 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms