RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 MRPL49Q13405 166 aaKnown RBP16.36■□□□□ 0.21
SDF4-205ENST00000465727 FAM53AQ6NSI3 398 aaPredicted RBP16.36■□□□□ 0.21
SDF4-205ENST00000465727 TRAT1Q6PIZ9 186 aa16.36■□□□□ 0.21
SDF4-205ENST00000465727 TEPPQ6URK8 271 aa16.36■□□□□ 0.21
SDF4-205ENST00000465727 TMPRSS7Q7RTY8 843 aa16.36■□□□□ 0.21
SDF4-205ENST00000465727 MRGPRDQ8TDS7 321 aa16.36■□□□□ 0.21
SDF4-205ENST00000465727 COQ2Q96H96 371 aa16.36■□□□□ 0.21
SDF4-205ENST00000465727 SEPSECSQ9HD40 501 aaKnown RBP16.36■□□□□ 0.21
SDF4-205ENST00000465727 IL19Q9UHD0 177 aa16.36■□□□□ 0.21
SDF4-205ENST00000465727 TTC28Q96AY4 2481 aa16.36■□□□□ 0.21
SDF4-205ENST00000465727 HELTA6NFD8 242 aa16.35■□□□□ 0.21
SDF4-205ENST00000465727 DLL1O00548 723 aa16.35■□□□□ 0.21
SDF4-205ENST00000465727 ISLRO14498 428 aa16.35■□□□□ 0.21
SDF4-205ENST00000465727 TNFSF15O95150 251 aa16.35■□□□□ 0.21
SDF4-205ENST00000465727 ADH4P08319 380 aa16.35■□□□□ 0.21
SDF4-205ENST00000465727 C3orf79P0CE67 100 aa16.35■□□□□ 0.21
SDF4-205ENST00000465727 CEBPDP49716 269 aaPredicted RBP16.35■□□□□ 0.21
SDF4-205ENST00000465727 ERVK-16P61578 105 aa16.35■□□□□ 0.21
SDF4-205ENST00000465727 ZXDAP98168 799 aa16.35■□□□□ 0.21
SDF4-205ENST00000465727 FOXF2Q12947 444 aa16.35■□□□□ 0.21
SDF4-205ENST00000465727 MORN2Q502X0 79 aa16.35■□□□□ 0.21
SDF4-205ENST00000465727 CENPWQ5EE01 88 aa16.35■□□□□ 0.21
SDF4-205ENST00000465727 MDP1Q86V88 176 aa16.35■□□□□ 0.21
SDF4-205ENST00000465727 STPG3Q8N7X2 389 aa16.35■□□□□ 0.21
SDF4-205ENST00000465727 OR2D3Q8NGH3 330 aa16.35■□□□□ 0.21
SDF4-205ENST00000465727 PHF7Q9BWX1 381 aaPredicted RBP16.35■□□□□ 0.21
SDF4-205ENST00000465727 TMEM167BQ9NRX6 74 aa16.35■□□□□ 0.21
SDF4-205ENST00000465727 MRPL27Q9P0M9 148 aaKnown RBP16.35■□□□□ 0.21
SDF4-205ENST00000465727 PSG11Q9UQ72 335 aa16.35■□□□□ 0.21
SDF4-205ENST00000465727 NKX6-3A6NJ46 265 aa16.34■□□□□ 0.21
SDF4-205ENST00000465727 DUTP33316 252 aaKnown RBP16.34■□□□□ 0.21
SDF4-205ENST00000465727 GNG10P50151 68 aa16.34■□□□□ 0.21
SDF4-205ENST00000465727 NIT1Q86X76 327 aa16.34■□□□□ 0.21
SDF4-205ENST00000465727 SSMEM1Q8WWF3 244 aa16.34■□□□□ 0.21
SDF4-205ENST00000465727 BCL2L2Q92843 193 aaPredicted RBP16.34■□□□□ 0.21
SDF4-205ENST00000465727 BORCS7Q96B45 105 aa16.34■□□□□ 0.21
SDF4-205ENST00000465727 RCHY1Q96PM5 261 aa16.34■□□□□ 0.21
SDF4-205ENST00000465727 IQCF6A8MYZ5 107 aa16.34■□□□□ 0.21
SDF4-205ENST00000465727 ITGB1BP1O14713 200 aa16.34■□□□□ 0.21
SDF4-205ENST00000465727 SMPD2O60906 423 aa16.34■□□□□ 0.21
SDF4-205ENST00000465727 TIGITQ495A1 244 aa16.34■□□□□ 0.21
SDF4-205ENST00000465727 C22orf15Q8WYQ4 148 aa16.34■□□□□ 0.21
SDF4-205ENST00000465727 CORO2AQ92828 525 aa16.34■□□□□ 0.21
SDF4-205ENST00000465727 SLC35D1Q9NTN3 355 aa16.34■□□□□ 0.21
SDF4-205ENST00000465727 CDC42EP3Q9UKI2 254 aa16.34■□□□□ 0.21
SDF4-205ENST00000465727 HCFC1P51610 2035 aa16.33■□□□□ 0.21
SDF4-205ENST00000465727 K7EP13 123 aa16.33■□□□□ 0.21
SDF4-205ENST00000465727 BMPR1BO00238 502 aa16.33■□□□□ 0.21
SDF4-205ENST00000465727 CCL25O15444 150 aa16.33■□□□□ 0.21
SDF4-205ENST00000465727 FCGR3BO75015 233 aa16.33■□□□□ 0.21
SDF4-205ENST00000465727 GRPP07492 148 aa16.33■□□□□ 0.21
SDF4-205ENST00000465727 SRIP30626 198 aa16.33■□□□□ 0.21
SDF4-205ENST00000465727 UBE2V1Q13404 147 aa16.33■□□□□ 0.21
SDF4-205ENST00000465727 SAPCD1Q5SSQ6 148 aa16.33■□□□□ 0.21
SDF4-205ENST00000465727 LYSMD4Q5XG99 296 aa16.33■□□□□ 0.21
SDF4-205ENST00000465727 C1orf159Q96HA4 380 aa16.33■□□□□ 0.21
SDF4-205ENST00000465727 BET1LQ9NYM9 111 aa16.33■□□□□ 0.21
SDF4-205ENST00000465727 FNDC10F2Z333 226 aa16.33■□□□□ 0.2
SDF4-205ENST00000465727 NTN3O00634 580 aaPredicted RBP16.33■□□□□ 0.2
SDF4-205ENST00000465727 SPINT2O43291 252 aa16.33■□□□□ 0.2
SDF4-205ENST00000465727 TSPOP30536 169 aa16.33■□□□□ 0.2
SDF4-205ENST00000465727 RBX1P62877 108 aa16.33■□□□□ 0.2
SDF4-205ENST00000465727 PNKDQ8N490 385 aa16.33■□□□□ 0.2
SDF4-205ENST00000465727 ZNF738Q8NE65 137 aa16.33■□□□□ 0.2
SDF4-205ENST00000465727 OR4P4Q8NGL7 312 aa16.33■□□□□ 0.2
SDF4-205ENST00000465727 COX11Q9Y6N1 276 aa16.33■□□□□ 0.2
SDF4-205ENST00000465727 SMIM27A0A1W2PRY6 76 aa16.32■□□□□ 0.2
SDF4-205ENST00000465727 SP1P08047 785 aa16.32■□□□□ 0.2
SDF4-205ENST00000465727 SSTR5P35346 364 aa16.32■□□□□ 0.2
SDF4-205ENST00000465727 GPR12P47775 334 aa16.32■□□□□ 0.2
SDF4-205ENST00000465727 LINC00205P59089 165 aa16.32■□□□□ 0.2
SDF4-205ENST00000465727 SPATA31B1PQ5VZV4 182 aa16.32■□□□□ 0.2
SDF4-205ENST00000465727 STUMQ69YW2 141 aa16.32■□□□□ 0.2
SDF4-205ENST00000465727 RASL11AQ6T310 242 aa16.32■□□□□ 0.2
SDF4-205ENST00000465727 CA2P00918 260 aa16.31■□□□□ 0.2
SDF4-205ENST00000465727 CELA3AP09093 270 aa16.31■□□□□ 0.2
SDF4-205ENST00000465727 PRR20EP86478 221 aa16.31■□□□□ 0.2
SDF4-205ENST00000465727 PRR20CP86479 221 aa16.31■□□□□ 0.2
SDF4-205ENST00000465727 PRR20DP86480 221 aa16.31■□□□□ 0.2
SDF4-205ENST00000465727 PRR20BP86481 221 aa16.31■□□□□ 0.2
SDF4-205ENST00000465727 PRR20AP86496 221 aa16.31■□□□□ 0.2
SDF4-205ENST00000465727 RELBQ01201 579 aa16.31■□□□□ 0.2
SDF4-205ENST00000465727 SPINK14Q6IE38 97 aa16.31■□□□□ 0.2
SDF4-205ENST00000465727 PQLC2Q6ZP29 291 aa16.31■□□□□ 0.2
SDF4-205ENST00000465727 ZNF439Q8NDP4 499 aa16.31■□□□□ 0.2
SDF4-205ENST00000465727 TSKUQ8WUA8 353 aa16.31■□□□□ 0.2
SDF4-205ENST00000465727 CGAP01215 116 aa16.31■□□□□ 0.2
SDF4-205ENST00000465727 SELENOVP59797 346 aa16.31■□□□□ 0.2
SDF4-205ENST00000465727 RTL8BQ17RB0 113 aa16.31■□□□□ 0.2
SDF4-205ENST00000465727 ABHD12Q8N2K0 398 aa16.31■□□□□ 0.2
SDF4-205ENST00000465727 PPIAL4AQ9Y536 164 aa16.31■□□□□ 0.2
SDF4-205ENST00000465727 IGHV2-26A0A0B4J1V2 119 aa16.3■□□□□ 0.2
SDF4-205ENST00000465727 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.3■□□□□ 0.2
SDF4-205ENST00000465727 K7ESF4 209 aa16.3■□□□□ 0.2
SDF4-205ENST00000465727 FOXH1O75593 365 aa16.3■□□□□ 0.2
SDF4-205ENST00000465727 APCSP02743 223 aa16.3■□□□□ 0.2
SDF4-205ENST00000465727 KIR2DS2P43631 304 aa16.3■□□□□ 0.2
SDF4-205ENST00000465727 SSPNQ14714 243 aa16.3■□□□□ 0.2
SDF4-205ENST00000465727 KIAA1644Q3SXP7 199 aa16.3■□□□□ 0.2
SDF4-205ENST00000465727 ACP7Q6ZNF0 438 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms