RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 RPA2P15927 270 aa15.81■□□□□ 0.12
SKA3-205ENST00000465471 G6PCP35575 357 aa15.81■□□□□ 0.12
SKA3-205ENST00000465471 RPL27AP46776 148 aaKnown RBP15.81■□□□□ 0.12
SKA3-205ENST00000465471 TMEM65Q6PI78 240 aa15.81■□□□□ 0.12
SKA3-205ENST00000465471 KLHL30-AS1Q8NEE0 82 aa15.81■□□□□ 0.12
SKA3-205ENST00000465471 C4orf3Q8WVX3 66 aa15.81■□□□□ 0.12
SKA3-205ENST00000465471 CRYM-AS1A6NIL9 109 aa15.8■□□□□ 0.12
SKA3-205ENST00000465471 CGB1A6NKQ9 187 aa15.8■□□□□ 0.12
SKA3-205ENST00000465471 UCP1P25874 307 aa15.8■□□□□ 0.12
SKA3-205ENST00000465471 TRIQKQ629K1 86 aa15.8■□□□□ 0.12
SKA3-205ENST00000465471 C8orf86Q6ZUL3 223 aa15.8■□□□□ 0.12
SKA3-205ENST00000465471 ADAD2Q8NCV1 583 aaKnown RBP15.8■□□□□ 0.12
SKA3-205ENST00000465471 CASTOR1Q8WTX7 329 aa15.8■□□□□ 0.12
SKA3-205ENST00000465471 TMEM230Q96A57 120 aa15.8■□□□□ 0.12
SKA3-205ENST00000465471 SCGB3A2Q96PL1 93 aa15.8■□□□□ 0.12
SKA3-205ENST00000465471 PHB2Q99623 299 aa15.8■□□□□ 0.12
SKA3-205ENST00000465471 SLA2Q9H6Q3 261 aa15.8■□□□□ 0.12
SKA3-205ENST00000465471 NAA60Q9H7X0 242 aa15.8■□□□□ 0.12
SKA3-205ENST00000465471 SERPINE2P07093 398 aa15.79■□□□□ 0.12
SKA3-205ENST00000465471 OR9G9P0C7N8 305 aa15.79■□□□□ 0.12
SKA3-205ENST00000465471 P0C879 139 aa15.79■□□□□ 0.12
SKA3-205ENST00000465471 IL7P13232 177 aa15.79■□□□□ 0.12
SKA3-205ENST00000465471 MYOD1P15172 320 aa15.79■□□□□ 0.12
SKA3-205ENST00000465471 OR2B8PP59922 312 aa15.79■□□□□ 0.12
SKA3-205ENST00000465471 RUNX1Q01196 453 aa15.79■□□□□ 0.12
SKA3-205ENST00000465471 ZNF57Q68EA5 555 aaPredicted RBP15.79■□□□□ 0.12
SKA3-205ENST00000465471 TTC9CQ8N5M4 171 aa15.79■□□□□ 0.12
SKA3-205ENST00000465471 OR5T1Q8NG75 326 aa15.79■□□□□ 0.12
SKA3-205ENST00000465471 GNB4Q9HAV0 340 aa15.79■□□□□ 0.12
SKA3-205ENST00000465471 NUDT19A8MXV4 375 aa15.78■□□□□ 0.12
SKA3-205ENST00000465471 I3L521 148 aa15.78■□□□□ 0.12
SKA3-205ENST00000465471 APELAP0DMC3 54 aa15.78■□□□□ 0.12
SKA3-205ENST00000465471 P2RX4Q99571 388 aa15.78■□□□□ 0.12
SKA3-205ENST00000465471 TMEM222Q9H0R3 208 aa15.78■□□□□ 0.12
SKA3-205ENST00000465471 NAP1L6A6NFF2 107 aa15.77■□□□□ 0.12
SKA3-205ENST00000465471 HMX3A6NHT5 357 aa15.77■□□□□ 0.12
SKA3-205ENST00000465471 IGKV1-5P01602 117 aa15.77■□□□□ 0.12
SKA3-205ENST00000465471 OR5AC1P0C628 307 aa15.77■□□□□ 0.12
SKA3-205ENST00000465471 CD40LGP29965 261 aa15.77■□□□□ 0.12
SKA3-205ENST00000465471 SP6Q3SY56 376 aa15.77■□□□□ 0.12
SKA3-205ENST00000465471 WFDC9Q8NEX5 89 aa15.77■□□□□ 0.12
SKA3-205ENST00000465471 GLYATL2Q8WU03 294 aa15.77■□□□□ 0.12
SKA3-205ENST00000465471 GALNT14Q96FL9 552 aa15.77■□□□□ 0.12
SKA3-205ENST00000465471 RAX2Q96IS3 184 aa15.77■□□□□ 0.12
SKA3-205ENST00000465471 TSC22D3Q99576 134 aa15.77■□□□□ 0.12
SKA3-205ENST00000465471 SLC25A21Q9BQT8 299 aaPredicted RBP15.77■□□□□ 0.12
SKA3-205ENST00000465471 SRSF8Q9BRL6 282 aaKnown RBP15.77■□□□□ 0.12
SKA3-205ENST00000465471 TMEM14BQ9NUH8 114 aa15.77■□□□□ 0.12
SKA3-205ENST00000465471 C15orf61A6NNL5 157 aa15.76■□□□□ 0.11
SKA3-205ENST00000465471 NPIPB5A8MRT5 1133 aa15.76■□□□□ 0.11
SKA3-205ENST00000465471 CDS2O95674 445 aa15.76■□□□□ 0.11
SKA3-205ENST00000465471 TRGV3P03979 118 aa15.76■□□□□ 0.11
SKA3-205ENST00000465471 CRYGCP07315 174 aa15.76■□□□□ 0.11
SKA3-205ENST00000465471 MYCNOSP40205 109 aa15.76■□□□□ 0.11
SKA3-205ENST00000465471 TPPP2P59282 170 aa15.76■□□□□ 0.11
SKA3-205ENST00000465471 FHL3Q13643 280 aa15.76■□□□□ 0.11
SKA3-205ENST00000465471 KLK9Q2XQG4 91 aa15.76■□□□□ 0.11
SKA3-205ENST00000465471 LINC00482Q8N8I6 264 aa15.76■□□□□ 0.11
SKA3-205ENST00000465471 MS4A10Q96PG2 267 aa15.76■□□□□ 0.11
SKA3-205ENST00000465471 FYTTD1Q96QD9 318 aaKnown RBP15.76■□□□□ 0.11
SKA3-205ENST00000465471 C7orf50Q9BRJ6 194 aaKnown RBP15.76■□□□□ 0.11
SKA3-205ENST00000465471 COMMD5Q9GZQ3 224 aa15.76■□□□□ 0.11
SKA3-205ENST00000465471 KLK9Q9UKQ9 250 aa15.76■□□□□ 0.11
SKA3-205ENST00000465471 TRBV9A0A0B4J1U6 114 aa15.75■□□□□ 0.11
SKA3-205ENST00000465471 TEX13DA0A0J9YY54 714 aaPredicted RBP15.75■□□□□ 0.11
SKA3-205ENST00000465471 TEX50A0A1B0GTY4 177 aa15.75■□□□□ 0.11
SKA3-205ENST00000465471 IGLC7A0M8Q6 106 aa15.75■□□□□ 0.11
SKA3-205ENST00000465471 PF4P02776 101 aa15.75■□□□□ 0.11
SKA3-205ENST00000465471 AREGP15514 252 aa15.75■□□□□ 0.11
SKA3-205ENST00000465471 BTCP35070 178 aa15.75■□□□□ 0.11
SKA3-205ENST00000465471 INPP1P49441 399 aa15.75■□□□□ 0.11
SKA3-205ENST00000465471 SUPT4H1P63272 117 aaKnown RBP15.75■□□□□ 0.11
SKA3-205ENST00000465471 DEFB136Q30KP8 78 aa15.75■□□□□ 0.11
SKA3-205ENST00000465471 THOC7Q6I9Y2 204 aaKnown RBP15.75■□□□□ 0.11
SKA3-205ENST00000465471 H2BFWTQ7Z2G1 175 aa15.75■□□□□ 0.11
SKA3-205ENST00000465471 SLC25A42Q86VD7 318 aa15.75■□□□□ 0.11
SKA3-205ENST00000465471 MRPL41Q8IXM3 137 aaKnown RBP15.75■□□□□ 0.11
SKA3-205ENST00000465471 LHFPL5Q8TAF8 219 aa15.75■□□□□ 0.11
SKA3-205ENST00000465471 S100ZQ8WXG8 99 aa15.75■□□□□ 0.11
SKA3-205ENST00000465471 CCDC32Q9BV29 185 aa15.75■□□□□ 0.11
SKA3-205ENST00000465471 QTRT1Q9BXR0 403 aaKnown RBP15.75■□□□□ 0.11
SKA3-205ENST00000465471 COA4Q9NYJ1 87 aa15.75■□□□□ 0.11
SKA3-205ENST00000465471 PRNDQ9UKY0 176 aa15.75■□□□□ 0.11
SKA3-205ENST00000465471 ZNF257Q9Y2Q1 563 aa15.75■□□□□ 0.11
SKA3-205ENST00000465471 NSG2Q9Y328 171 aa15.75■□□□□ 0.11
SKA3-205ENST00000465471 DBX1A6NMT0 343 aa15.74■□□□□ 0.11
SKA3-205ENST00000465471 CCL24O00175 119 aa15.74■□□□□ 0.11
SKA3-205ENST00000465471 RBMXL2O75526 392 aaKnown RBP15.74■□□□□ 0.11
SKA3-205ENST00000465471 SNAPC5O75971 98 aa15.74■□□□□ 0.11
SKA3-205ENST00000465471 LGALS1P09382 135 aaKnown RBP15.74■□□□□ 0.11
SKA3-205ENST00000465471 CTRB1P17538 263 aa15.74■□□□□ 0.11
SKA3-205ENST00000465471 DHODHQ02127 395 aa15.74■□□□□ 0.11
SKA3-205ENST00000465471 TRIM16LQ309B1 348 aa15.74■□□□□ 0.11
SKA3-205ENST00000465471 CTRB2Q6GPI1 263 aa15.74■□□□□ 0.11
SKA3-205ENST00000465471 SGPP2Q8IWX5 399 aa15.74■□□□□ 0.11
SKA3-205ENST00000465471 OR5B3Q8NH48 314 aa15.74■□□□□ 0.11
SKA3-205ENST00000465471 TMEM56Q96MV1 263 aa15.74■□□□□ 0.11
SKA3-205ENST00000465471 NDUFA4L2Q9NRX3 87 aa15.74■□□□□ 0.11
SKA3-205ENST00000465471 ZNF355PQ9NSJ1 428 aa15.74■□□□□ 0.11
SKA3-205ENST00000465471 TMEM56-RWDD3S4R434 201 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms