RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 MS4A10Q96PG2 267 aa11.31□□□□□ -0.6
SQSTM1-205ENST00000464493 TP53RKQ96S44 253 aa11.31□□□□□ -0.6
SQSTM1-205ENST00000464493 SDHCQ99643 169 aaPredicted RBP11.31□□□□□ -0.6
SQSTM1-205ENST00000464493 ZNF355PQ9NSJ1 428 aa11.31□□□□□ -0.6
SQSTM1-205ENST00000464493 E7EUB6 86 aa11.3□□□□□ -0.6
SQSTM1-205ENST00000464493 B3GALNT1O75752 331 aa11.3□□□□□ -0.6
SQSTM1-205ENST00000464493 IGKV1-39P01597 117 aa11.3□□□□□ -0.6
SQSTM1-205ENST00000464493 IGKV1D-39P04432 117 aa11.3□□□□□ -0.6
SQSTM1-205ENST00000464493 FGF2P09038 288 aa11.3□□□□□ -0.6
SQSTM1-205ENST00000464493 FYTTD1Q96QD9 318 aaKnown RBP11.3□□□□□ -0.6
SQSTM1-205ENST00000464493 SLA2Q9H6Q3 261 aa11.3□□□□□ -0.6
SQSTM1-205ENST00000464493 VSIG4Q9Y279 399 aa11.3□□□□□ -0.6
SQSTM1-205ENST00000464493 FBN3Q75N90 2809 aa11.3□□□□□ -0.6
SQSTM1-205ENST00000464493 TEX13DA0A0J9YY54 714 aaPredicted RBP11.29□□□□□ -0.6
SQSTM1-205ENST00000464493 HMX3A6NHT5 357 aa11.29□□□□□ -0.6
SQSTM1-205ENST00000464493 H3BUA1 57 aa11.29□□□□□ -0.6
SQSTM1-205ENST00000464493 SNAPC5O75971 98 aa11.29□□□□□ -0.6
SQSTM1-205ENST00000464493 PF4P02776 101 aa11.29□□□□□ -0.6
SQSTM1-205ENST00000464493 TRGV3P03979 118 aa11.29□□□□□ -0.6
SQSTM1-205ENST00000464493 OR9G9P0C7N8 305 aa11.29□□□□□ -0.6
SQSTM1-205ENST00000464493 MYOD1P15172 320 aa11.29□□□□□ -0.6
SQSTM1-205ENST00000464493 TPPP2P59282 170 aa11.29□□□□□ -0.6
SQSTM1-205ENST00000464493 SP6Q3SY56 376 aa11.29□□□□□ -0.6
SQSTM1-205ENST00000464493 C4orf3Q8WVX3 66 aa11.29□□□□□ -0.6
SQSTM1-205ENST00000464493 SEC22AQ96IW7 307 aa11.29□□□□□ -0.6
SQSTM1-205ENST00000464493 COMMD5Q9GZQ3 224 aa11.29□□□□□ -0.6
SQSTM1-205ENST00000464493 NAA60Q9H7X0 242 aa11.29□□□□□ -0.6
SQSTM1-205ENST00000464493 AKIP1Q9NQ31 210 aa11.29□□□□□ -0.6
SQSTM1-205ENST00000464493 A0A1B0GW64 132 aa11.28□□□□□ -0.6
SQSTM1-205ENST00000464493 CRYM-AS1A6NIL9 109 aa11.28□□□□□ -0.6
SQSTM1-205ENST00000464493 TEX22C9J3V5 150 aa11.28□□□□□ -0.6
SQSTM1-205ENST00000464493 BRI3O95415 125 aa11.28□□□□□ -0.6
SQSTM1-205ENST00000464493 UCP1P25874 307 aa11.28□□□□□ -0.6
SQSTM1-205ENST00000464493 OR2B8PP59922 312 aa11.28□□□□□ -0.6
SQSTM1-205ENST00000464493 TRIM16LQ309B1 348 aa11.28□□□□□ -0.6
SQSTM1-205ENST00000464493 H2BFWTQ7Z2G1 175 aa11.28□□□□□ -0.6
SQSTM1-205ENST00000464493 SLC25A42Q86VD7 318 aa11.28□□□□□ -0.6
SQSTM1-205ENST00000464493 SGPP2Q8IWX5 399 aa11.28□□□□□ -0.6
SQSTM1-205ENST00000464493 TTC9CQ8N5M4 171 aa11.28□□□□□ -0.6
SQSTM1-205ENST00000464493 ADAD2Q8NCV1 583 aaKnown RBP11.28□□□□□ -0.6
SQSTM1-205ENST00000464493 TSC22D3Q99576 134 aa11.28□□□□□ -0.6
SQSTM1-205ENST00000464493 SLC25A21Q9BQT8 299 aaPredicted RBP11.28□□□□□ -0.6
SQSTM1-205ENST00000464493 GNB4Q9HAV0 340 aa11.28□□□□□ -0.6
SQSTM1-205ENST00000464493 COA4Q9NYJ1 87 aa11.28□□□□□ -0.6
SQSTM1-205ENST00000464493 PTTG2Q9NZH5 202 aa11.28□□□□□ -0.6
SQSTM1-205ENST00000464493 NSG2Q9Y328 171 aa11.28□□□□□ -0.6
SQSTM1-205ENST00000464493 TEX50A0A1B0GTY4 177 aa11.27□□□□□ -0.61
SQSTM1-205ENST00000464493 LINC00854A0A1B0GVQ3 168 aa11.27□□□□□ -0.61
SQSTM1-205ENST00000464493 NAP1L6A6NFF2 107 aa11.27□□□□□ -0.61
SQSTM1-205ENST00000464493 CCL24O00175 119 aa11.27□□□□□ -0.61
SQSTM1-205ENST00000464493 ATG12O94817 140 aa11.27□□□□□ -0.61
SQSTM1-205ENST00000464493 OR5AC1P0C628 307 aa11.27□□□□□ -0.61
SQSTM1-205ENST00000464493 IL7P13232 177 aa11.27□□□□□ -0.61
SQSTM1-205ENST00000464493 MYCNOSP40205 109 aa11.27□□□□□ -0.61
SQSTM1-205ENST00000464493 DHODHQ02127 395 aa11.27□□□□□ -0.61
SQSTM1-205ENST00000464493 DEFB136Q30KP8 78 aa11.27□□□□□ -0.61
SQSTM1-205ENST00000464493 ETV3LQ6ZN32 361 aa11.27□□□□□ -0.61
SQSTM1-205ENST00000464493 GLYATL2Q8WU03 294 aa11.27□□□□□ -0.61
SQSTM1-205ENST00000464493 S100ZQ8WXG8 99 aa11.27□□□□□ -0.61
SQSTM1-205ENST00000464493 RAX2Q96IS3 184 aa11.27□□□□□ -0.61
SQSTM1-205ENST00000464493 DUX3Q96PT4 197 aa11.27□□□□□ -0.61
SQSTM1-205ENST00000464493 OR5B12Q96R08 314 aa11.27□□□□□ -0.61
SQSTM1-205ENST00000464493 TMEM222Q9H0R3 208 aa11.27□□□□□ -0.61
SQSTM1-205ENST00000464493 FKBP11Q9NYL4 201 aa11.27□□□□□ -0.61
SQSTM1-205ENST00000464493 PRNDQ9UKY0 176 aa11.27□□□□□ -0.61
SQSTM1-205ENST00000464493 KCNIP3Q9Y2W7 256 aa11.27□□□□□ -0.61
SQSTM1-205ENST00000464493 A0A0G2JLM5 398 aa11.26□□□□□ -0.61
SQSTM1-205ENST00000464493 CGB1A6NKQ9 187 aa11.26□□□□□ -0.61
SQSTM1-205ENST00000464493 NPIPB5A8MRT5 1133 aa11.26□□□□□ -0.61
SQSTM1-205ENST00000464493 CENPXA8MT69 81 aa11.26□□□□□ -0.61
SQSTM1-205ENST00000464493 I3L521 148 aa11.26□□□□□ -0.61
SQSTM1-205ENST00000464493 CDS2O95674 445 aa11.26□□□□□ -0.61
SQSTM1-205ENST00000464493 AREGP15514 252 aa11.26□□□□□ -0.61
SQSTM1-205ENST00000464493 AKR1C4P17516 323 aa11.26□□□□□ -0.61
SQSTM1-205ENST00000464493 RUNX1Q01196 453 aa11.26□□□□□ -0.61
SQSTM1-205ENST00000464493 WFDC9Q8NEX5 89 aa11.26□□□□□ -0.61
SQSTM1-205ENST00000464493 OR11H1Q8NG94 326 aa11.26□□□□□ -0.61
SQSTM1-205ENST00000464493 OR1L8Q8NGR8 309 aa11.26□□□□□ -0.61
SQSTM1-205ENST00000464493 OR4A16Q8NH70 328 aa11.26□□□□□ -0.61
SQSTM1-205ENST00000464493 TMEM230Q96A57 120 aa11.26□□□□□ -0.61
SQSTM1-205ENST00000464493 P2RX4Q99571 388 aa11.26□□□□□ -0.61
SQSTM1-205ENST00000464493 SRSF8Q9BRL6 282 aaKnown RBP11.26□□□□□ -0.61
SQSTM1-205ENST00000464493 QTRT1Q9BXR0 403 aaKnown RBP11.26□□□□□ -0.61
SQSTM1-205ENST00000464493 ZNF257Q9Y2Q1 563 aa11.26□□□□□ -0.61
SQSTM1-205ENST00000464493 OR51B2Q9Y5P1 312 aa11.26□□□□□ -0.61
SQSTM1-205ENST00000464493 C13orf42A0A1B0GVH6 325 aa11.25□□□□□ -0.61
SQSTM1-205ENST00000464493 IGKV1-5P01602 117 aa11.25□□□□□ -0.61
SQSTM1-205ENST00000464493 IGHV3-11P01762 117 aa11.25□□□□□ -0.61
SQSTM1-205ENST00000464493 PRH1P02810 166 aa11.25□□□□□ -0.61
SQSTM1-205ENST00000464493 CRYGCP07315 174 aa11.25□□□□□ -0.61
SQSTM1-205ENST00000464493 TRAPPC2P0DI81 140 aa11.25□□□□□ -0.61
SQSTM1-205ENST00000464493 TRAPPC2BP0DI82 140 aa11.25□□□□□ -0.61
SQSTM1-205ENST00000464493 CD33P20138 364 aa11.25□□□□□ -0.61
SQSTM1-205ENST00000464493 PSMB6P28072 239 aa11.25□□□□□ -0.61
SQSTM1-205ENST00000464493 CCR6P51684 374 aa11.25□□□□□ -0.61
SQSTM1-205ENST00000464493 AKR1C2P52895 323 aa11.25□□□□□ -0.61
SQSTM1-205ENST00000464493 THOC7Q6I9Y2 204 aaKnown RBP11.25□□□□□ -0.61
SQSTM1-205ENST00000464493 TMED4Q7Z7H5 227 aa11.25□□□□□ -0.61
SQSTM1-205ENST00000464493 MRPL41Q8IXM3 137 aaKnown RBP11.25□□□□□ -0.61
SQSTM1-205ENST00000464493 LINC00482Q8N8I6 264 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms