RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 C1QTNF9P0C862 333 aa7.65□□□□□ -1.18
HPS4-208ENST00000464362 CTSSP25774 331 aa7.65□□□□□ -1.18
HPS4-208ENST00000464362 P2RX4Q99571 388 aa7.65□□□□□ -1.18
HPS4-208ENST00000464362 LIME1Q9H400 295 aa7.65□□□□□ -1.18
HPS4-208ENST00000464362 SEBOXQ9HB31 216 aaPredicted RBP7.65□□□□□ -1.18
HPS4-208ENST00000464362 NAGKQ9UJ70 344 aa7.65□□□□□ -1.18
HPS4-208ENST00000464362 TMEM56-RWDD3S4R434 201 aa7.65□□□□□ -1.18
HPS4-208ENST00000464362 A0A0G2JRQ6 117 aa7.65□□□□□ -1.18
HPS4-208ENST00000464362 SCO2A0A1W2PP80 73 aa7.65□□□□□ -1.18
HPS4-208ENST00000464362 CEACAM18A8MTB9 384 aa7.65□□□□□ -1.18
HPS4-208ENST00000464362 SMPD2O60906 423 aa7.65□□□□□ -1.18
HPS4-208ENST00000464362 CGAP01215 116 aa7.65□□□□□ -1.18
HPS4-208ENST00000464362 P01737 135 aa7.65□□□□□ -1.18
HPS4-208ENST00000464362 SELLP14151 372 aa7.65□□□□□ -1.18
HPS4-208ENST00000464362 CD81P60033 236 aa7.65□□□□□ -1.18
HPS4-208ENST00000464362 IBA57Q5T440 356 aaKnown RBP7.65□□□□□ -1.18
HPS4-208ENST00000464362 OR4F17Q8NGA8 305 aa7.65□□□□□ -1.18
HPS4-208ENST00000464362 OR4D5Q8NGN0 318 aa7.65□□□□□ -1.18
HPS4-208ENST00000464362 FAM122AQ96E09 287 aa7.65□□□□□ -1.18
HPS4-208ENST00000464362 PAXXQ9BUH6 204 aa7.65□□□□□ -1.18
HPS4-208ENST00000464362 LPAR2Q9HBW0 351 aa7.65□□□□□ -1.18
HPS4-208ENST00000464362 PLXNA4Q9HCM2 1894 aa7.65□□□□□ -1.19
HPS4-208ENST00000464362 PCDH15Q96QU1 1955 aa7.65□□□□□ -1.19
HPS4-208ENST00000464362 HIST1H1BP16401 226 aaKnown RBP7.65□□□□□ -1.19
HPS4-208ENST00000464362 HOXA5P20719 270 aa7.65□□□□□ -1.19
HPS4-208ENST00000464362 MPZP25189 248 aa7.65□□□□□ -1.19
HPS4-208ENST00000464362 SRIP30626 198 aa7.65□□□□□ -1.19
HPS4-208ENST00000464362 KIR2DS2P43631 304 aa7.65□□□□□ -1.19
HPS4-208ENST00000464362 LHX2P50458 406 aa7.65□□□□□ -1.19
HPS4-208ENST00000464362 FOXA3P55318 350 aaPredicted RBP7.65□□□□□ -1.19
HPS4-208ENST00000464362 HSPE1P61604 102 aaKnown RBP7.65□□□□□ -1.19
HPS4-208ENST00000464362 ELOBQ15370 118 aa7.65□□□□□ -1.19
HPS4-208ENST00000464362 MST1LQ2TV78 715 aa7.65□□□□□ -1.19
HPS4-208ENST00000464362 WDR73Q6P4I2 378 aa7.65□□□□□ -1.19
HPS4-208ENST00000464362 GGNQ86UU5 652 aa7.65□□□□□ -1.19
HPS4-208ENST00000464362 STPG3Q8N7X2 389 aa7.65□□□□□ -1.19
HPS4-208ENST00000464362 EAF1Q96JC9 268 aaPredicted RBP7.65□□□□□ -1.19
HPS4-208ENST00000464362 C1orf147Q96MC9 270 aaPredicted RBP7.65□□□□□ -1.19
HPS4-208ENST00000464362 CHRDL1Q9BU40 450 aa7.65□□□□□ -1.19
HPS4-208ENST00000464362 DDA1Q9BW61 102 aa7.65□□□□□ -1.19
HPS4-208ENST00000464362 AAMDCQ9H7C9 122 aa7.65□□□□□ -1.19
HPS4-208ENST00000464362 SDF2L1Q9HCN8 221 aa7.65□□□□□ -1.19
HPS4-208ENST00000464362 PLSCR2Q9NRY7 297 aa7.65□□□□□ -1.19
HPS4-208ENST00000464362 REV3LO60673 3130 aa7.65□□□□□ -1.19
HPS4-208ENST00000464362 C9orf172C9J069 976 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 COX5BP10606 129 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 CD33P20138 364 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 CLDN18P56856 261 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 MMDQ15546 238 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 SAPCD1Q5SSQ6 148 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 FAM216BQ8N7L0 139 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 VSTM2AQ8TAG5 236 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 HILPDAQ9Y5L2 63 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 TNCP24821 2201 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 LOC102723996A0A087X1L8 192 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 PGPA6NDG6 321 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 APCSP02743 223 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 HINT1P49773 126 aaPredicted RBP7.64□□□□□ -1.19
HPS4-208ENST00000464362 RPL23P62829 140 aaKnown RBP7.64□□□□□ -1.19
HPS4-208ENST00000464362 FAM27E3Q08E93 113 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 CYP2G1PQ6ZSU1 146 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 NPIPB3Q92617 1050 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 NABP2Q9BQ15 211 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 S4R3C0 116 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 C2CD3Q4AC94 2353 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 IGLV3-32A0A0A0MS00 114 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 CA2P00918 260 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 FTH1P19P0C7X4 201 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 IGFBP2P18065 325 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 IGHV1-2P23083 117 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 BRS3P32247 399 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 MMD2Q8IY49 270 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 PSMG3Q9BT73 122 aaPredicted RBP7.64□□□□□ -1.19
HPS4-208ENST00000464362 MS4A5Q9H3V2 200 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 PRR33A8MZF0 331 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 FAM90A26D6RGX4 464 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 TMEM250H0YL14 139 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 C16orf97H3BN30 126 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 PSPNO60542 156 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 MOSP00540 346 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 ANOS1P23352 680 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 P2RY6Q15077 328 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 Q6ZRM9 215 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 PRNTQ86SH4 94 aa7.64□□□□□ -1.19
HPS4-208ENST00000464362 PPIAL4EA0A075B759 164 aa7.63□□□□□ -1.19
HPS4-208ENST00000464362 LOC389332A0A1B0GUA5 103 aa7.63□□□□□ -1.19
HPS4-208ENST00000464362 PPIAL4DF5H284 164 aa7.63□□□□□ -1.19
HPS4-208ENST00000464362 K7ERU9 68 aa7.63□□□□□ -1.19
HPS4-208ENST00000464362 GNG7O60262 68 aa7.63□□□□□ -1.19
HPS4-208ENST00000464362 PPIAL4FP0DN26 164 aa7.63□□□□□ -1.19
HPS4-208ENST00000464362 RPL8P62917 257 aaKnown RBP7.63□□□□□ -1.19
HPS4-208ENST00000464362 FAM53AQ6NSI3 398 aaPredicted RBP7.63□□□□□ -1.19
HPS4-208ENST00000464362 C20orf204Q6ZNR8 217 aa7.63□□□□□ -1.19
HPS4-208ENST00000464362 SFRP2Q96HF1 295 aa7.63□□□□□ -1.19
HPS4-208ENST00000464362 NDFIP1Q9BT67 221 aa7.63□□□□□ -1.19
HPS4-208ENST00000464362 PPIAL4AQ9Y536 164 aa7.63□□□□□ -1.19
HPS4-208ENST00000464362 ANKHD1Q8IWZ3 2542 aaKnown RBP7.63□□□□□ -1.19
HPS4-208ENST00000464362 CENPWQ5EE01 88 aa7.63□□□□□ -1.19
HPS4-208ENST00000464362 HEPN1Q6WQI6 88 aa7.63□□□□□ -1.19
HPS4-208ENST00000464362 ACP7Q6ZNF0 438 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms