RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 GPR84Q9NQS5 396 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 SPANXA1Q9NS26 97 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 FBXL12Q9NXK8 326 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 RPUSD1Q9UJJ7 312 aaKnown RBP2.49□□□□□ -2.01
ITGB1-208ENST00000464001 RIMS1Q86UR5 1692 aaKnown RBP2.49□□□□□ -2.01
ITGB1-208ENST00000464001 IGLV3-16A0A075B6K0 115 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 LINC00862A6NCI5 91 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 A8MWL6 223 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 J3KT08 172 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 APOC1P02654 83 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 C1QCP02747 245 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 TBPL1P62380 186 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 CAV1Q03135 178 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 LOXL1Q08397 574 aaPredicted RBP2.48□□□□□ -2.01
ITGB1-208ENST00000464001 DHRS2Q13268 280 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 EBI3Q14213 229 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 MMDQ15546 238 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 SP6Q3SY56 376 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 ZFP1Q6P2D0 407 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 WDR59Q6PJI9 974 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 ANGPTL5Q86XS5 388 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 PCP2Q8IVA1 136 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 OR9Q1Q8NGQ5 310 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 OR13C8Q8NGS7 320 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 OR5W2Q8NH69 310 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 ITLN2Q8WWU7 325 aaPredicted RBP2.48□□□□□ -2.01
ITGB1-208ENST00000464001 DNAJC9Q8WXX5 260 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 OR5P3Q8WZ94 311 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 RNASE6Q93091 150 aaKnown RBP2.48□□□□□ -2.01
ITGB1-208ENST00000464001 SHANK2-AS3Q9BTD1 123 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 DOHHQ9BU89 302 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 SCRT1Q9BWW7 348 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 COMMD5Q9GZQ3 224 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 WDR61Q9GZS3 305 aaKnown RBP2.48□□□□□ -2.01
ITGB1-208ENST00000464001 ZNF286AQ9HBT8 521 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 COPZ2Q9P299 210 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 TP73-AS1Q9UF72 201 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 AMMECR1Q9Y4X0 333 aaPredicted RBP2.48□□□□□ -2.01
ITGB1-208ENST00000464001 SCRIBQ14160 1630 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 TECPR2O15040 1411 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 UHRF1BP1Q6BDS2 1440 aa2.48□□□□□ -2.01
ITGB1-208ENST00000464001 FANCMQ8IYD8 2048 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 IGSF9BQ9UPX0 1349 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 NEO1Q92859 1461 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 IGHV3-49A0A0A0MS15 119 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 IGKV1D-43A0A0B4J1Z2 117 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 LOC102725191A0A1B0GVB3 256 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 A6NDX4 124 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 CCDC160A6NGH7 325 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 RIIAD1A6NNX1 92 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 C5orf58C9J3I9 102 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 K7EP13 123 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 AIPO00170 330 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 BPY2O14599 106 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 HLA-DQB1P01920 261 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 APOA2P02652 100 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 RBP1P09455 135 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 SMIM10L2AP0DMW4 78 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 SMIM10L2BP0DMW5 78 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 CGB3P0DN86 165 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 CGB7P0DN87 165 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 PPIBP23284 216 aaKnown RBP2.47□□□□□ -2.01
ITGB1-208ENST00000464001 CA5AP35218 305 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 G6PCP35575 357 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 POLR2HP52434 150 aaKnown RBP2.47□□□□□ -2.01
ITGB1-208ENST00000464001 LINC00315P59091 139 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 DNAJB13P59910 316 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 SYCNQ0VAF6 134 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 ZNF678Q5SXM1 525 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 HRCT1Q6UXD1 115 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 GPHB5Q86YW7 130 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 TMEM86AQ8N2M4 240 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 Q8N9W7 124 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 OR11G2Q8NGC1 345 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 MRPL30Q8TCC3 161 aaKnown RBP2.47□□□□□ -2.01
ITGB1-208ENST00000464001 SLC7A6Q92536 515 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 FRZBQ92765 325 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 EXOSC8Q96B26 276 aaKnown RBP2.47□□□□□ -2.01
ITGB1-208ENST00000464001 RBMXL1Q96E39 390 aaKnown RBP2.47□□□□□ -2.01
ITGB1-208ENST00000464001 L3HYPDHQ96EM0 354 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 TRIB3Q96RU7 358 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 PEBP4Q96S96 227 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 B9D2Q9BPU9 175 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 TMEM70Q9BUB7 260 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 HMG20AQ9NP66 347 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 NALCNQ8IZF0 1738 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 OBSL1O75147 1896 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 SCN1AP35498 2009 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 TONSLQ96HA7 1378 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 SCN4AP35499 1836 aa2.47□□□□□ -2.01
ITGB1-208ENST00000464001 COL27A1Q8IZC6 1860 aaPredicted RBP2.46□□□□□ -2.02
ITGB1-208ENST00000464001 TRBV20OR9-2A0A075B6H5 130 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 TRBV19A0A075B6N1 114 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 TRAV36DV7A0A075B6V5 113 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 IGHV3-64DA0A0J9YX35 117 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 IZUMO1RA6ND01 250 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 DPRXA6NFQ7 191 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 OR5H14A6NHG9 310 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 F8W036 122 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 PLA2G10O15496 165 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms