RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 OR5B12Q96R08 314 aa13.69□□□□□ -0.22
VPS52-214ENST00000463486 SPIN2AQ99865 258 aa13.69□□□□□ -0.22
VPS52-214ENST00000463486 SPIN2BQ9BPZ2 258 aa13.69□□□□□ -0.22
VPS52-214ENST00000463486 ALX4Q9H161 411 aaPredicted RBP13.69□□□□□ -0.22
VPS52-214ENST00000463486 DISC1C4P0D8 188 aa13.68□□□□□ -0.22
VPS52-214ENST00000463486 KRASP01116 189 aa13.68□□□□□ -0.22
VPS52-214ENST00000463486 CTSDP07339 412 aaPredicted RBP13.68□□□□□ -0.22
VPS52-214ENST00000463486 OR9G9P0C7N8 305 aa13.68□□□□□ -0.22
VPS52-214ENST00000463486 PGAM2P15259 253 aa13.68□□□□□ -0.22
VPS52-214ENST00000463486 IGLL1P15814 213 aa13.68□□□□□ -0.22
VPS52-214ENST00000463486 RPL27AP46776 148 aaKnown RBP13.68□□□□□ -0.22
VPS52-214ENST00000463486 ZNF45Q02386 682 aa13.68□□□□□ -0.22
VPS52-214ENST00000463486 KLK9Q2XQG4 91 aa13.68□□□□□ -0.22
VPS52-214ENST00000463486 C1QL4Q86Z23 238 aa13.68□□□□□ -0.22
VPS52-214ENST00000463486 SEC22AQ96IW7 307 aa13.68□□□□□ -0.22
VPS52-214ENST00000463486 TP53RKQ96S44 253 aa13.68□□□□□ -0.22
VPS52-214ENST00000463486 SDHCQ99643 169 aaPredicted RBP13.68□□□□□ -0.22
VPS52-214ENST00000463486 SRRQ9GZT4 340 aa13.68□□□□□ -0.22
VPS52-214ENST00000463486 C5orf66Q9H5L9 145 aa13.68□□□□□ -0.22
VPS52-214ENST00000463486 KLK9Q9UKQ9 250 aa13.68□□□□□ -0.22
VPS52-214ENST00000463486 GPR132Q9UNW8 380 aa13.68□□□□□ -0.22
VPS52-214ENST00000463486 TRBV9A0A0B4J1U6 114 aa13.67□□□□□ -0.22
VPS52-214ENST00000463486 H0Y980 276 aa13.67□□□□□ -0.22
VPS52-214ENST00000463486 ACTL6BO94805 426 aa13.67□□□□□ -0.22
VPS52-214ENST00000463486 TRGV3P03979 118 aa13.67□□□□□ -0.22
VPS52-214ENST00000463486 LGALS1P09382 135 aaKnown RBP13.67□□□□□ -0.22
VPS52-214ENST00000463486 CD33P20138 364 aa13.67□□□□□ -0.22
VPS52-214ENST00000463486 G6PCP35575 357 aa13.67□□□□□ -0.22
VPS52-214ENST00000463486 TPPP2P59282 170 aa13.67□□□□□ -0.22
VPS52-214ENST00000463486 SURF2Q15527 256 aaPredicted RBP13.67□□□□□ -0.22
VPS52-214ENST00000463486 C19orf35Q6ZS72 473 aa13.67□□□□□ -0.22
VPS52-214ENST00000463486 DMBX1Q8NFW5 382 aa13.67□□□□□ -0.22
VPS52-214ENST00000463486 OR11H1Q8NG94 326 aa13.67□□□□□ -0.22
VPS52-214ENST00000463486 ZFAND1Q8TCF1 268 aa13.67□□□□□ -0.22
VPS52-214ENST00000463486 PHB2Q99623 299 aa13.67□□□□□ -0.22
VPS52-214ENST00000463486 HRASLSQ9HDD0 168 aa13.67□□□□□ -0.22
VPS52-214ENST00000463486 DBX1A6NMT0 343 aa13.66□□□□□ -0.22
VPS52-214ENST00000463486 CRYGCP07315 174 aa13.66□□□□□ -0.22
VPS52-214ENST00000463486 P0C879 139 aa13.66□□□□□ -0.22
VPS52-214ENST00000463486 AREGP15514 252 aa13.66□□□□□ -0.22
VPS52-214ENST00000463486 S100GP29377 79 aa13.66□□□□□ -0.22
VPS52-214ENST00000463486 DEFA5Q01523 94 aa13.66□□□□□ -0.22
VPS52-214ENST00000463486 OR1N2Q8NGR9 330 aa13.66□□□□□ -0.22
VPS52-214ENST00000463486 PRRT1Q99946 306 aa13.66□□□□□ -0.22
VPS52-214ENST00000463486 C3orf85A0A1B0GTC6 90 aa13.65□□□□□ -0.22
VPS52-214ENST00000463486 TEX50A0A1B0GTY4 177 aa13.65□□□□□ -0.22
VPS52-214ENST00000463486 IGLC7A0M8Q6 106 aa13.65□□□□□ -0.22
VPS52-214ENST00000463486 NPIPB5A8MRT5 1133 aa13.65□□□□□ -0.22
VPS52-214ENST00000463486 IGHV3-11P01762 117 aa13.65□□□□□ -0.22
VPS52-214ENST00000463486 PRH1P02810 166 aa13.65□□□□□ -0.22
VPS52-214ENST00000463486 CD40LGP29965 261 aa13.65□□□□□ -0.22
VPS52-214ENST00000463486 ECI1P42126 302 aa13.65□□□□□ -0.22
VPS52-214ENST00000463486 BAK1Q16611 211 aa13.65□□□□□ -0.22
VPS52-214ENST00000463486 SPANXN2Q5MJ10 180 aa13.65□□□□□ -0.22
VPS52-214ENST00000463486 GDPD1Q8N9F7 314 aa13.65□□□□□ -0.22
VPS52-214ENST00000463486 RCC1LQ96I51 464 aaKnown RBP13.65□□□□□ -0.22
VPS52-214ENST00000463486 FANCD2OSQ96PS1 177 aa13.65□□□□□ -0.22
VPS52-214ENST00000463486 FYTTD1Q96QD9 318 aaKnown RBP13.65□□□□□ -0.22
VPS52-214ENST00000463486 ZNF355PQ9NSJ1 428 aa13.65□□□□□ -0.22
VPS52-214ENST00000463486 COA4Q9NYJ1 87 aa13.65□□□□□ -0.22
VPS52-214ENST00000463486 IGKV1-5P01602 117 aa13.64□□□□□ -0.23
VPS52-214ENST00000463486 CTRB1P17538 263 aa13.64□□□□□ -0.23
VPS52-214ENST00000463486 UCP1P25874 307 aa13.64□□□□□ -0.23
VPS52-214ENST00000463486 DEFA6Q01524 100 aa13.64□□□□□ -0.23
VPS52-214ENST00000463486 ZNF616Q08AN1 781 aa13.64□□□□□ -0.23
VPS52-214ENST00000463486 SP6Q3SY56 376 aa13.64□□□□□ -0.23
VPS52-214ENST00000463486 CTRB2Q6GPI1 263 aa13.64□□□□□ -0.23
VPS52-214ENST00000463486 TMEM230Q96A57 120 aa13.64□□□□□ -0.23
VPS52-214ENST00000463486 AKIP1Q9NQ31 210 aa13.64□□□□□ -0.23
VPS52-214ENST00000463486 NDUFA4L2Q9NRX3 87 aa13.64□□□□□ -0.23
VPS52-214ENST00000463486 COPZ2Q9P299 210 aa13.64□□□□□ -0.23
VPS52-214ENST00000463486 NSG2Q9Y328 171 aa13.64□□□□□ -0.23
VPS52-214ENST00000463486 DMRT1Q9Y5R6 373 aa13.64□□□□□ -0.23
VPS52-214ENST00000463486 IGHV4OR15-8A0A075B7B6 117 aa13.63□□□□□ -0.23
VPS52-214ENST00000463486 A0A087WW49 117 aa13.63□□□□□ -0.23
VPS52-214ENST00000463486 SERPINE2P07093 398 aa13.63□□□□□ -0.23
VPS52-214ENST00000463486 PSMB6P28072 239 aa13.63□□□□□ -0.23
VPS52-214ENST00000463486 ERVK-16P61578 105 aa13.63□□□□□ -0.23
VPS52-214ENST00000463486 TOMM5Q8N4H5 51 aa13.63□□□□□ -0.23
VPS52-214ENST00000463486 CCDC71LQ8N9Z2 235 aa13.63□□□□□ -0.23
VPS52-214ENST00000463486 OR10W1Q8NGF6 305 aa13.63□□□□□ -0.23
VPS52-214ENST00000463486 GLYATL2Q8WU03 294 aa13.63□□□□□ -0.23
VPS52-214ENST00000463486 USMG5Q96IX5 58 aa13.63□□□□□ -0.23
VPS52-214ENST00000463486 TMEM14BQ9NUH8 114 aa13.63□□□□□ -0.23
VPS52-214ENST00000463486 ZNF257Q9Y2Q1 563 aa13.63□□□□□ -0.23
VPS52-214ENST00000463486 A0A0G2JLM5 398 aa13.62□□□□□ -0.23
VPS52-214ENST00000463486 CRYM-AS1A6NIL9 109 aa13.62□□□□□ -0.23
VPS52-214ENST00000463486 WIPF1O43516 503 aa13.62□□□□□ -0.23
VPS52-214ENST00000463486 RHOGP84095 191 aa13.62□□□□□ -0.23
VPS52-214ENST00000463486 WT1-ASQ06250 92 aa13.62□□□□□ -0.23
VPS52-214ENST00000463486 ZNF343Q6P1L6 599 aa13.62□□□□□ -0.23
VPS52-214ENST00000463486 SLC25A42Q86VD7 318 aa13.62□□□□□ -0.23
VPS52-214ENST00000463486 LHFPL5Q8TAF8 219 aa13.62□□□□□ -0.23
VPS52-214ENST00000463486 DEDD2Q8WXF8 326 aa13.62□□□□□ -0.23
VPS52-214ENST00000463486 SRSF8Q9BRL6 282 aaKnown RBP13.62□□□□□ -0.23
VPS52-214ENST00000463486 QTRT1Q9BXR0 403 aaKnown RBP13.62□□□□□ -0.23
VPS52-214ENST00000463486 COMMD5Q9GZQ3 224 aa13.62□□□□□ -0.23
VPS52-214ENST00000463486 TMEM222Q9H0R3 208 aa13.62□□□□□ -0.23
VPS52-214ENST00000463486 NAA60Q9H7X0 242 aa13.62□□□□□ -0.23
VPS52-214ENST00000463486 MCUBQ9NWR8 336 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms