RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 TP53RKQ96S44 253 aa13.77□□□□□ -0.21
SF1-212ENST00000463343 BATF3Q9NR55 127 aa13.77□□□□□ -0.21
SF1-212ENST00000463343 C14orf166Q9Y224 244 aaKnown RBP13.77□□□□□ -0.21
SF1-212ENST00000463343 C3orf85A0A1B0GTC6 90 aa13.76□□□□□ -0.21
SF1-212ENST00000463343 A0A1B0GW64 132 aa13.76□□□□□ -0.21
SF1-212ENST00000463343 MARCH11A6NNE9 402 aa13.76□□□□□ -0.21
SF1-212ENST00000463343 HLA-GP17693 338 aa13.76□□□□□ -0.21
SF1-212ENST00000463343 FAUP35544 74 aaKnown RBP13.76□□□□□ -0.21
SF1-212ENST00000463343 RPL27AP46776 148 aaKnown RBP13.76□□□□□ -0.21
SF1-212ENST00000463343 ERVK-16P61578 105 aa13.76□□□□□ -0.21
SF1-212ENST00000463343 SP6Q3SY56 376 aa13.76□□□□□ -0.21
SF1-212ENST00000463343 MRAPQ8TCY5 172 aa13.76□□□□□ -0.21
SF1-212ENST00000463343 UBE2E2Q96LR5 201 aa13.76□□□□□ -0.21
SF1-212ENST00000463343 PHB2Q99623 299 aa13.76□□□□□ -0.21
SF1-212ENST00000463343 SPIN2AQ99865 258 aa13.76□□□□□ -0.21
SF1-212ENST00000463343 SPIN2BQ9BPZ2 258 aa13.76□□□□□ -0.21
SF1-212ENST00000463343 GNB4Q9HAV0 340 aa13.76□□□□□ -0.21
SF1-212ENST00000463343 HMX3A6NHT5 357 aa13.75□□□□□ -0.21
SF1-212ENST00000463343 CGB1A6NKQ9 187 aa13.75□□□□□ -0.21
SF1-212ENST00000463343 TEX22C9J3V5 150 aa13.75□□□□□ -0.21
SF1-212ENST00000463343 H0Y980 276 aa13.75□□□□□ -0.21
SF1-212ENST00000463343 PRB2P02812 416 aaPredicted RBP13.75□□□□□ -0.21
SF1-212ENST00000463343 SERPINE2P07093 398 aa13.75□□□□□ -0.21
SF1-212ENST00000463343 SLC6A1P30531 599 aa13.75□□□□□ -0.21
SF1-212ENST00000463343 OXLD1Q5BKU9 147 aa13.75□□□□□ -0.21
SF1-212ENST00000463343 ZNF57Q68EA5 555 aaPredicted RBP13.75□□□□□ -0.21
SF1-212ENST00000463343 ETV3LQ6ZN32 361 aa13.75□□□□□ -0.21
SF1-212ENST00000463343 WFDC9Q8NEX5 89 aa13.75□□□□□ -0.21
SF1-212ENST00000463343 DEDD2Q8WXF8 326 aa13.75□□□□□ -0.21
SF1-212ENST00000463343 SEC22AQ96IW7 307 aa13.75□□□□□ -0.21
SF1-212ENST00000463343 ZNF355PQ9NSJ1 428 aa13.75□□□□□ -0.21
SF1-212ENST00000463343 VSIG4Q9Y279 399 aa13.75□□□□□ -0.21
SF1-212ENST00000463343 OR9G9P0C7N8 305 aa13.74□□□□□ -0.21
SF1-212ENST00000463343 CD40LGP29965 261 aa13.74□□□□□ -0.21
SF1-212ENST00000463343 LINC00299Q6ZSB3 139 aa13.74□□□□□ -0.21
SF1-212ENST00000463343 TTC9CQ8N5M4 171 aa13.74□□□□□ -0.21
SF1-212ENST00000463343 ADAD2Q8NCV1 583 aaKnown RBP13.74□□□□□ -0.21
SF1-212ENST00000463343 RAX2Q96IS3 184 aa13.74□□□□□ -0.21
SF1-212ENST00000463343 SCGB3A2Q96PL1 93 aa13.74□□□□□ -0.21
SF1-212ENST00000463343 DUX3Q96PT4 197 aa13.74□□□□□ -0.21
SF1-212ENST00000463343 FYTTD1Q96QD9 318 aaKnown RBP13.74□□□□□ -0.21
SF1-212ENST00000463343 AKIP1Q9NQ31 210 aa13.74□□□□□ -0.21
SF1-212ENST00000463343 NSG2Q9Y328 171 aa13.74□□□□□ -0.21
SF1-212ENST00000463343 TEX50A0A1B0GTY4 177 aa13.73□□□□□ -0.21
SF1-212ENST00000463343 H3BUA1 57 aa13.73□□□□□ -0.21
SF1-212ENST00000463343 I3L521 148 aa13.73□□□□□ -0.21
SF1-212ENST00000463343 BRI3O95415 125 aa13.73□□□□□ -0.21
SF1-212ENST00000463343 TRGV3P03979 118 aa13.73□□□□□ -0.21
SF1-212ENST00000463343 UCP1P25874 307 aa13.73□□□□□ -0.21
SF1-212ENST00000463343 MYCNOSP40205 109 aa13.73□□□□□ -0.21
SF1-212ENST00000463343 OR2B8PP59922 312 aa13.73□□□□□ -0.21
SF1-212ENST00000463343 DEFB136Q30KP8 78 aa13.73□□□□□ -0.21
SF1-212ENST00000463343 TRIQKQ629K1 86 aa13.73□□□□□ -0.21
SF1-212ENST00000463343 C4orf3Q8WVX3 66 aa13.73□□□□□ -0.21
SF1-212ENST00000463343 TMEM230Q96A57 120 aa13.73□□□□□ -0.21
SF1-212ENST00000463343 OR5B12Q96R08 314 aa13.73□□□□□ -0.21
SF1-212ENST00000463343 P2RX4Q99571 388 aa13.73□□□□□ -0.21
SF1-212ENST00000463343 SLA2Q9H6Q3 261 aa13.73□□□□□ -0.21
SF1-212ENST00000463343 NAA60Q9H7X0 242 aa13.73□□□□□ -0.21
SF1-212ENST00000463343 DNAH3Q8TD57 4116 aa13.72□□□□□ -0.21
SF1-212ENST00000463343 TEX13DA0A0J9YY54 714 aaPredicted RBP13.72□□□□□ -0.21
SF1-212ENST00000463343 CRYM-AS1A6NIL9 109 aa13.72□□□□□ -0.21
SF1-212ENST00000463343 CCL24O00175 119 aa13.72□□□□□ -0.21
SF1-212ENST00000463343 IGKV1-5P01602 117 aa13.72□□□□□ -0.21
SF1-212ENST00000463343 PF4P02776 101 aa13.72□□□□□ -0.21
SF1-212ENST00000463343 FGF2P09038 288 aa13.72□□□□□ -0.21
SF1-212ENST00000463343 IL7P13232 177 aa13.72□□□□□ -0.21
SF1-212ENST00000463343 INPP1P49441 399 aa13.72□□□□□ -0.21
SF1-212ENST00000463343 TPPP2P59282 170 aa13.72□□□□□ -0.21
SF1-212ENST00000463343 RUNX1Q01196 453 aa13.72□□□□□ -0.21
SF1-212ENST00000463343 MRPL41Q8IXM3 137 aaKnown RBP13.72□□□□□ -0.21
SF1-212ENST00000463343 GLYATL2Q8WU03 294 aa13.72□□□□□ -0.21
SF1-212ENST00000463343 COMMD5Q9GZQ3 224 aa13.72□□□□□ -0.21
SF1-212ENST00000463343 TMEM222Q9H0R3 208 aa13.72□□□□□ -0.21
SF1-212ENST00000463343 AURKAIP1Q9NWT8 199 aaPredicted RBP13.72□□□□□ -0.21
SF1-212ENST00000463343 COA4Q9NYJ1 87 aa13.72□□□□□ -0.21
SF1-212ENST00000463343 PTTG2Q9NZH5 202 aa13.72□□□□□ -0.21
SF1-212ENST00000463343 LINC00854A0A1B0GVQ3 168 aa13.71□□□□□ -0.21
SF1-212ENST00000463343 RBMXL2O75526 392 aaKnown RBP13.71□□□□□ -0.21
SF1-212ENST00000463343 B3GALNT1O75752 331 aa13.71□□□□□ -0.21
SF1-212ENST00000463343 SNAPC5O75971 98 aa13.71□□□□□ -0.21
SF1-212ENST00000463343 PRH1P02810 166 aa13.71□□□□□ -0.21
SF1-212ENST00000463343 OR5AC1P0C628 307 aa13.71□□□□□ -0.21
SF1-212ENST00000463343 AREGP15514 252 aa13.71□□□□□ -0.21
SF1-212ENST00000463343 H2BFWTQ7Z2G1 175 aa13.71□□□□□ -0.21
SF1-212ENST00000463343 LINC00482Q8N8I6 264 aa13.71□□□□□ -0.21
SF1-212ENST00000463343 DBX1A6NMT0 343 aa13.7□□□□□ -0.22
SF1-212ENST00000463343 NPIPB5A8MRT5 1133 aa13.7□□□□□ -0.22
SF1-212ENST00000463343 CDS2O95674 445 aa13.7□□□□□ -0.22
SF1-212ENST00000463343 IGHV3-11P01762 117 aa13.7□□□□□ -0.22
SF1-212ENST00000463343 CRYGCP07315 174 aa13.7□□□□□ -0.22
SF1-212ENST00000463343 P0C879 139 aa13.7□□□□□ -0.22
SF1-212ENST00000463343 DHODHQ02127 395 aa13.7□□□□□ -0.22
SF1-212ENST00000463343 IZUMO4Q1ZYL8 232 aa13.7□□□□□ -0.22
SF1-212ENST00000463343 TRIM16LQ309B1 348 aa13.7□□□□□ -0.22
SF1-212ENST00000463343 C19orf35Q6ZS72 473 aa13.7□□□□□ -0.22
SF1-212ENST00000463343 SLC25A42Q86VD7 318 aa13.7□□□□□ -0.22
SF1-212ENST00000463343 OR1L8Q8NGR8 309 aa13.7□□□□□ -0.22
SF1-212ENST00000463343 OR1N2Q8NGR9 330 aa13.7□□□□□ -0.22
SF1-212ENST00000463343 SLC25A21Q9BQT8 299 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms