RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 COMMD5Q9GZQ3 224 aa11.85□□□□□ -0.51
VARS-219ENST00000461328 ZNF256Q9Y2P7 627 aaPredicted RBP11.85□□□□□ -0.51
VARS-219ENST00000461328 ZNF257Q9Y2Q1 563 aa11.85□□□□□ -0.51
VARS-219ENST00000461328 MARCH11A6NNE9 402 aa11.84□□□□□ -0.51
VARS-219ENST00000461328 UPK2O00526 184 aa11.84□□□□□ -0.51
VARS-219ENST00000461328 BRI3O95415 125 aa11.84□□□□□ -0.51
VARS-219ENST00000461328 LY86O95711 162 aa11.84□□□□□ -0.51
VARS-219ENST00000461328 RAB3DO95716 219 aa11.84□□□□□ -0.51
VARS-219ENST00000461328 DHFRP00374 187 aa11.84□□□□□ -0.51
VARS-219ENST00000461328 IL6RP08887 468 aaPredicted RBP11.84□□□□□ -0.51
VARS-219ENST00000461328 ZNF735P0CB33 412 aa11.84□□□□□ -0.51
VARS-219ENST00000461328 PPP5CP53041 499 aa11.84□□□□□ -0.51
VARS-219ENST00000461328 UCP3P55916 312 aa11.84□□□□□ -0.51
VARS-219ENST00000461328 ATP5G2Q06055 141 aa11.84□□□□□ -0.51
VARS-219ENST00000461328 EXOSC2Q13868 293 aaKnown RBP11.84□□□□□ -0.51
VARS-219ENST00000461328 POU2AF1Q16633 256 aa11.84□□□□□ -0.51
VARS-219ENST00000461328 SCGB2B2Q4G0G5 96 aa11.84□□□□□ -0.51
VARS-219ENST00000461328 TBC1D26Q86UD7 250 aa11.84□□□□□ -0.51
VARS-219ENST00000461328 ZNF429Q86V71 674 aa11.84□□□□□ -0.51
VARS-219ENST00000461328 ARRDC1Q8N5I2 433 aa11.84□□□□□ -0.51
VARS-219ENST00000461328 RSRP1Q9BUV0 290 aa11.84□□□□□ -0.51
VARS-219ENST00000461328 AKIP1Q9NQ31 210 aa11.84□□□□□ -0.51
VARS-219ENST00000461328 SLC2A9Q9NRM0 540 aa11.84□□□□□ -0.51
VARS-219ENST00000461328 PEF1Q9UBV8 284 aaKnown RBP11.84□□□□□ -0.51
VARS-219ENST00000461328 TRAV3A0A0B4J244 114 aa11.83□□□□□ -0.52
VARS-219ENST00000461328 NPIPB5A8MRT5 1133 aa11.83□□□□□ -0.52
VARS-219ENST00000461328 OR2J3O76001 311 aa11.83□□□□□ -0.52
VARS-219ENST00000461328 KRASP01116 189 aa11.83□□□□□ -0.52
VARS-219ENST00000461328 REG1AP05451 166 aa11.83□□□□□ -0.52
VARS-219ENST00000461328 DEFA4P12838 97 aa11.83□□□□□ -0.52
VARS-219ENST00000461328 AREGP15514 252 aa11.83□□□□□ -0.52
VARS-219ENST00000461328 G6PCP35575 357 aa11.83□□□□□ -0.52
VARS-219ENST00000461328 ZNF45Q02386 682 aa11.83□□□□□ -0.52
VARS-219ENST00000461328 ZNF343Q6P1L6 599 aa11.83□□□□□ -0.52
VARS-219ENST00000461328 C19orf35Q6ZS72 473 aa11.83□□□□□ -0.52
VARS-219ENST00000461328 TMEM229BQ8NBD8 167 aa11.83□□□□□ -0.52
VARS-219ENST00000461328 NECAP1Q8NC96 275 aa11.83□□□□□ -0.52
VARS-219ENST00000461328 MCFD2Q8NI22 146 aa11.83□□□□□ -0.52
VARS-219ENST00000461328 SMIM4Q8WVI0 70 aa11.83□□□□□ -0.52
VARS-219ENST00000461328 OR4C12Q96R67 309 aa11.83□□□□□ -0.52
VARS-219ENST00000461328 ELOVL1Q9BW60 279 aa11.83□□□□□ -0.52
VARS-219ENST00000461328 RABL2AQ9UBK7 228 aaPredicted RBP11.83□□□□□ -0.52
VARS-219ENST00000461328 RABL2BQ9UNT1 228 aa11.83□□□□□ -0.52
VARS-219ENST00000461328 E7EUB6 86 aa11.82□□□□□ -0.52
VARS-219ENST00000461328 RBMXL2O75526 392 aaKnown RBP11.82□□□□□ -0.52
VARS-219ENST00000461328 SNAPC5O75971 98 aa11.82□□□□□ -0.52
VARS-219ENST00000461328 PI3P19957 117 aa11.82□□□□□ -0.52
VARS-219ENST00000461328 PSMB6P28072 239 aa11.82□□□□□ -0.52
VARS-219ENST00000461328 OR2B8PP59922 312 aa11.82□□□□□ -0.52
VARS-219ENST00000461328 SSBP1Q04837 148 aaKnown RBP11.82□□□□□ -0.52
VARS-219ENST00000461328 RPEL1Q2QD12 228 aa11.82□□□□□ -0.52
VARS-219ENST00000461328 C15orf32Q32M92 178 aa11.82□□□□□ -0.52
VARS-219ENST00000461328 C11orf87Q6NUJ2 197 aa11.82□□□□□ -0.52
VARS-219ENST00000461328 STEAP1BQ6NZ63 245 aa11.82□□□□□ -0.52
VARS-219ENST00000461328 OR4D10Q8NGI6 311 aa11.82□□□□□ -0.52
VARS-219ENST00000461328 HINT2Q9BX68 163 aa11.82□□□□□ -0.52
VARS-219ENST00000461328 QTRT1Q9BXR0 403 aaKnown RBP11.82□□□□□ -0.52
VARS-219ENST00000461328 SLIRPQ9GZT3 109 aaKnown RBP11.82□□□□□ -0.52
VARS-219ENST00000461328 FBXL7Q9UJT9 491 aa11.82□□□□□ -0.52
VARS-219ENST00000461328 CEPT1Q9Y6K0 416 aa11.82□□□□□ -0.52
VARS-219ENST00000461328 TNCP24821 2201 aa11.82□□□□□ -0.52
VARS-219ENST00000461328 TRBV9A0A0B4J1U6 114 aa11.81□□□□□ -0.52
VARS-219ENST00000461328 A0A1B0GW64 132 aa11.81□□□□□ -0.52
VARS-219ENST00000461328 TRBV12-3P01733 135 aa11.81□□□□□ -0.52
VARS-219ENST00000461328 SERPINE2P07093 398 aa11.81□□□□□ -0.52
VARS-219ENST00000461328 SYNJ2BPP57105 145 aa11.81□□□□□ -0.52
VARS-219ENST00000461328 MEF2DQ14814 521 aa11.81□□□□□ -0.52
VARS-219ENST00000461328 ZNF585BQ52M93 769 aa11.81□□□□□ -0.52
VARS-219ENST00000461328 ACSM6Q6P461 480 aa11.81□□□□□ -0.52
VARS-219ENST00000461328 LSM4Q9Y4Z0 139 aaKnown RBP11.81□□□□□ -0.52
VARS-219ENST00000461328 CD74P04233 296 aa11.8□□□□□ -0.52
VARS-219ENST00000461328 TRAPPC2P0DI81 140 aa11.8□□□□□ -0.52
VARS-219ENST00000461328 TRAPPC2BP0DI82 140 aa11.8□□□□□ -0.52
VARS-219ENST00000461328 PIGPP57054 158 aa11.8□□□□□ -0.52
VARS-219ENST00000461328 TATDN3Q17R31 274 aa11.8□□□□□ -0.52
VARS-219ENST00000461328 THOC7Q6I9Y2 204 aaKnown RBP11.8□□□□□ -0.52
VARS-219ENST00000461328 FAAP20Q6NZ36 180 aa11.8□□□□□ -0.52
VARS-219ENST00000461328 LHFPL1Q86WI0 220 aa11.8□□□□□ -0.52
VARS-219ENST00000461328 CCDC71LQ8N9Z2 235 aa11.8□□□□□ -0.52
VARS-219ENST00000461328 OR6Q1Q8NGQ2 317 aa11.8□□□□□ -0.52
VARS-219ENST00000461328 OR1L8Q8NGR8 309 aa11.8□□□□□ -0.52
VARS-219ENST00000461328 ZFAND1Q8TCF1 268 aa11.8□□□□□ -0.52
VARS-219ENST00000461328 ZNF486Q96H40 463 aaPredicted RBP11.8□□□□□ -0.52
VARS-219ENST00000461328 TSC22D3Q99576 134 aa11.8□□□□□ -0.52
VARS-219ENST00000461328 FAM212BQ9NTI7 297 aaPredicted RBP11.8□□□□□ -0.52
VARS-219ENST00000461328 COPZ2Q9P299 210 aa11.8□□□□□ -0.52
VARS-219ENST00000461328 RSL24D1Q9UHA3 163 aaKnown RBP11.8□□□□□ -0.52
VARS-219ENST00000461328 NSG2Q9Y328 171 aa11.8□□□□□ -0.52
VARS-219ENST00000461328 OR51B2Q9Y5P1 312 aa11.8□□□□□ -0.52
VARS-219ENST00000461328 FABP12A6NFH5 140 aa11.79□□□□□ -0.52
VARS-219ENST00000461328 DISC1C4P0D8 188 aa11.79□□□□□ -0.52
VARS-219ENST00000461328 CTDSPLO15194 276 aa11.79□□□□□ -0.52
VARS-219ENST00000461328 CYB5BO43169 146 aa11.79□□□□□ -0.52
VARS-219ENST00000461328 IGHV3-23P01764 117 aa11.79□□□□□ -0.52
VARS-219ENST00000461328 CRYGCP07315 174 aa11.79□□□□□ -0.52
VARS-219ENST00000461328 FGF2P09038 288 aa11.79□□□□□ -0.52
VARS-219ENST00000461328 AKAIN1P0CW23 69 aa11.79□□□□□ -0.52
VARS-219ENST00000461328 HIST1H1BP16401 226 aaKnown RBP11.79□□□□□ -0.52
VARS-219ENST00000461328 CTRB1P17538 263 aa11.79□□□□□ -0.52
VARS-219ENST00000461328 MECP2P51608 486 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms