RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 A0A1B0GW64 132 aa17.29■□□□□ 0.36
TRAF4-207ENST00000461195 NPIPB5A8MRT5 1133 aa17.29■□□□□ 0.36
TRAF4-207ENST00000461195 H3BMQ9 156 aa17.29■□□□□ 0.36
TRAF4-207ENST00000461195 SAP30O75446 220 aa17.29■□□□□ 0.36
TRAF4-207ENST00000461195 CD3DP04234 171 aa17.29■□□□□ 0.36
TRAF4-207ENST00000461195 FGF2P09038 288 aa17.29■□□□□ 0.36
TRAF4-207ENST00000461195 ACSM6Q6P461 480 aa17.29■□□□□ 0.36
TRAF4-207ENST00000461195 NBEAL2Q6ZNJ1 2754 aa17.28■□□□□ 0.36
TRAF4-207ENST00000461195 TRAV3A0A0B4J244 114 aa17.28■□□□□ 0.36
TRAF4-207ENST00000461195 GABARAPH6UMI1 98 aa17.28■□□□□ 0.36
TRAF4-207ENST00000461195 MYOD1P15172 320 aa17.28■□□□□ 0.36
TRAF4-207ENST00000461195 LPAR6P43657 344 aa17.28■□□□□ 0.36
TRAF4-207ENST00000461195 MRPS10P82664 201 aaKnown RBP17.28■□□□□ 0.36
TRAF4-207ENST00000461195 ATP5G2Q06055 141 aa17.28■□□□□ 0.36
TRAF4-207ENST00000461195 NECAP1Q8NC96 275 aa17.28■□□□□ 0.36
TRAF4-207ENST00000461195 COMMD5Q9GZQ3 224 aa17.28■□□□□ 0.36
TRAF4-207ENST00000461195 MARCH11A6NNE9 402 aa17.27■□□□□ 0.36
TRAF4-207ENST00000461195 AREGP15514 252 aa17.27■□□□□ 0.36
TRAF4-207ENST00000461195 RPA2P15927 270 aa17.27■□□□□ 0.36
TRAF4-207ENST00000461195 PSMB6P28072 239 aa17.27■□□□□ 0.36
TRAF4-207ENST00000461195 OR2B8PP59922 312 aa17.27■□□□□ 0.36
TRAF4-207ENST00000461195 DCTN2Q13561 401 aaKnown RBP17.27■□□□□ 0.36
TRAF4-207ENST00000461195 ZNF585BQ52M93 769 aa17.27■□□□□ 0.36
TRAF4-207ENST00000461195 TBC1D26Q86UD7 250 aa17.27■□□□□ 0.36
TRAF4-207ENST00000461195 ARRDC1Q8N5I2 433 aa17.27■□□□□ 0.36
TRAF4-207ENST00000461195 TMEM229BQ8NBD8 167 aa17.27■□□□□ 0.36
TRAF4-207ENST00000461195 DIRAS2Q96HU8 199 aa17.27■□□□□ 0.36
TRAF4-207ENST00000461195 FAM212BQ9NTI7 297 aaPredicted RBP17.27■□□□□ 0.36
TRAF4-207ENST00000461195 RABL2AQ9UBK7 228 aaPredicted RBP17.27■□□□□ 0.36
TRAF4-207ENST00000461195 RABL2BQ9UNT1 228 aa17.27■□□□□ 0.36
TRAF4-207ENST00000461195 CGB1A6NKQ9 187 aa17.26■□□□□ 0.35
TRAF4-207ENST00000461195 OR2J3O76001 311 aa17.26■□□□□ 0.35
TRAF4-207ENST00000461195 DHFRP00374 187 aa17.26■□□□□ 0.35
TRAF4-207ENST00000461195 CRYGCP07315 174 aa17.26■□□□□ 0.35
TRAF4-207ENST00000461195 TAS2R19P59542 299 aa17.26■□□□□ 0.35
TRAF4-207ENST00000461195 SSBP1Q04837 148 aaKnown RBP17.26■□□□□ 0.35
TRAF4-207ENST00000461195 EXOSC2Q13868 293 aaKnown RBP17.26■□□□□ 0.35
TRAF4-207ENST00000461195 LHFPL1Q86WI0 220 aa17.26■□□□□ 0.35
TRAF4-207ENST00000461195 PRR25Q96S07 402 aa17.26■□□□□ 0.35
TRAF4-207ENST00000461195 ELOVL1Q9BW60 279 aa17.26■□□□□ 0.35
TRAF4-207ENST00000461195 C6orf62Q9GZU0 229 aaPredicted RBP17.26■□□□□ 0.35
TRAF4-207ENST00000461195 KRASP01116 189 aa17.25■□□□□ 0.35
TRAF4-207ENST00000461195 TRBV12-3P01733 135 aa17.25■□□□□ 0.35
TRAF4-207ENST00000461195 CD74P04233 296 aa17.25■□□□□ 0.35
TRAF4-207ENST00000461195 PGAM2P15259 253 aa17.25■□□□□ 0.35
TRAF4-207ENST00000461195 CTRB1P17538 263 aa17.25■□□□□ 0.35
TRAF4-207ENST00000461195 KLF5Q13887 457 aaPredicted RBP17.25■□□□□ 0.35
TRAF4-207ENST00000461195 IL18Q14116 193 aa17.25■□□□□ 0.35
TRAF4-207ENST00000461195 C15orf32Q32M92 178 aa17.25■□□□□ 0.35
TRAF4-207ENST00000461195 CTRB2Q6GPI1 263 aa17.25■□□□□ 0.35
TRAF4-207ENST00000461195 C19orf35Q6ZS72 473 aa17.25■□□□□ 0.35
TRAF4-207ENST00000461195 CADM3Q8N126 398 aa17.25■□□□□ 0.35
TRAF4-207ENST00000461195 OR4C12Q96R67 309 aa17.25■□□□□ 0.35
TRAF4-207ENST00000461195 SRSF8Q9BRL6 282 aaKnown RBP17.25■□□□□ 0.35
TRAF4-207ENST00000461195 SLIRPQ9GZT3 109 aaKnown RBP17.25■□□□□ 0.35
TRAF4-207ENST00000461195 ZNF256Q9Y2P7 627 aaPredicted RBP17.25■□□□□ 0.35
TRAF4-207ENST00000461195 CEPT1Q9Y6K0 416 aa17.25■□□□□ 0.35
TRAF4-207ENST00000461195 RAB3DO95716 219 aa17.24■□□□□ 0.35
TRAF4-207ENST00000461195 G6PCP35575 357 aa17.24■□□□□ 0.35
TRAF4-207ENST00000461195 FAM209BQ5JX69 171 aa17.24■□□□□ 0.35
TRAF4-207ENST00000461195 STEAP1BQ6NZ63 245 aa17.24■□□□□ 0.35
TRAF4-207ENST00000461195 OR4D10Q8NGI6 311 aa17.24■□□□□ 0.35
TRAF4-207ENST00000461195 SMIM4Q8WVI0 70 aa17.24■□□□□ 0.35
TRAF4-207ENST00000461195 ZNF486Q96H40 463 aaPredicted RBP17.24■□□□□ 0.35
TRAF4-207ENST00000461195 QTRT1Q9BXR0 403 aaKnown RBP17.24■□□□□ 0.35
TRAF4-207ENST00000461195 FBXL7Q9UJT9 491 aa17.24■□□□□ 0.35
TRAF4-207ENST00000461195 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.23■□□□□ 0.35
TRAF4-207ENST00000461195 CTDSPLO15194 276 aa17.23■□□□□ 0.35
TRAF4-207ENST00000461195 REG1AP05451 166 aa17.23■□□□□ 0.35
TRAF4-207ENST00000461195 DEFA4P12838 97 aa17.23■□□□□ 0.35
TRAF4-207ENST00000461195 HIST1H1BP16401 226 aaKnown RBP17.23■□□□□ 0.35
TRAF4-207ENST00000461195 RPEL1Q2QD12 228 aa17.23■□□□□ 0.35
TRAF4-207ENST00000461195 THOC7Q6I9Y2 204 aaKnown RBP17.23■□□□□ 0.35
TRAF4-207ENST00000461195 OR6Q1Q8NGQ2 317 aa17.23■□□□□ 0.35
TRAF4-207ENST00000461195 FANCD2OSQ96PS1 177 aa17.23■□□□□ 0.35
TRAF4-207ENST00000461195 IGLC7A0M8Q6 106 aa17.22■□□□□ 0.35
TRAF4-207ENST00000461195 SNAPC5O75971 98 aa17.22■□□□□ 0.35
TRAF4-207ENST00000461195 LY86O95711 162 aa17.22■□□□□ 0.35
TRAF4-207ENST00000461195 PTBP1P26599 531 aaKnown RBP eCLIP17.22■□□□□ 0.35
TRAF4-207ENST00000461195 SYNJ2BPP57105 145 aa17.22■□□□□ 0.35
TRAF4-207ENST00000461195 RND3P61587 244 aa17.22■□□□□ 0.35
TRAF4-207ENST00000461195 TATDN3Q17R31 274 aa17.22■□□□□ 0.35
TRAF4-207ENST00000461195 KLK9Q2XQG4 91 aa17.22■□□□□ 0.35
TRAF4-207ENST00000461195 OR1L8Q8NGR8 309 aa17.22■□□□□ 0.35
TRAF4-207ENST00000461195 TERB2Q8NHR7 220 aa17.22■□□□□ 0.35
TRAF4-207ENST00000461195 MCFD2Q8NI22 146 aa17.22■□□□□ 0.35
TRAF4-207ENST00000461195 KLK9Q9UKQ9 250 aa17.22■□□□□ 0.35
TRAF4-207ENST00000461195 TEX50A0A1B0GTY4 177 aa17.21■□□□□ 0.35
TRAF4-207ENST00000461195 CCDC160A6NGH7 325 aa17.21■□□□□ 0.35
TRAF4-207ENST00000461195 TRAPPC2P0DI81 140 aa17.21■□□□□ 0.35
TRAF4-207ENST00000461195 TRAPPC2BP0DI82 140 aa17.21■□□□□ 0.35
TRAF4-207ENST00000461195 PPP5CP53041 499 aa17.21■□□□□ 0.35
TRAF4-207ENST00000461195 MEF2DQ14814 521 aa17.21■□□□□ 0.35
TRAF4-207ENST00000461195 SCGB2B2Q4G0G5 96 aa17.21■□□□□ 0.35
TRAF4-207ENST00000461195 OR9G4Q8NGQ1 327 aa17.21■□□□□ 0.35
TRAF4-207ENST00000461195 NXF2Q9GZY0 626 aaKnown RBP17.21■□□□□ 0.35
TRAF4-207ENST00000461195 SORL1Q92673 2214 aa17.2■□□□□ 0.34
TRAF4-207ENST00000461195 BMPR1BO00238 502 aa17.2■□□□□ 0.34
TRAF4-207ENST00000461195 NDUFB8O95169 186 aa17.2■□□□□ 0.34
TRAF4-207ENST00000461195 PI3P19957 117 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms