RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 LHFPL1Q86WI0 220 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 ZCCHC24Q8N2G6 241 aaKnown RBP8.64□□□□□ -1.03
HERC4-207ENST00000460168 GCSAMQ8N6F7 178 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 SCGB3A2Q96PL1 93 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 GINS3Q9BRX5 216 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 Q9N2K0 584 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 GCM1Q9NP62 436 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 CISD1Q9NZ45 108 aaKnown RBP8.64□□□□□ -1.03
HERC4-207ENST00000460168 UFC1Q9Y3C8 167 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 OR51B2Q9Y5P1 312 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 TRAV14DV4A0A0A6YYC5 116 aa8.63□□□□□ -1.03
HERC4-207ENST00000460168 S1PR2O95136 353 aa8.63□□□□□ -1.03
HERC4-207ENST00000460168 PLAUP00749 431 aa8.63□□□□□ -1.03
HERC4-207ENST00000460168 HLA-AP01891 365 aaKnown RBP8.63□□□□□ -1.03
HERC4-207ENST00000460168 SMIM17P0DL12 118 aa8.63□□□□□ -1.03
HERC4-207ENST00000460168 EGR1P18146 543 aa8.63□□□□□ -1.03
HERC4-207ENST00000460168 GPR6P46095 362 aaPredicted RBP8.63□□□□□ -1.03
HERC4-207ENST00000460168 ZNF585BQ52M93 769 aa8.63□□□□□ -1.03
HERC4-207ENST00000460168 AADACL3Q5VUY0 350 aa8.63□□□□□ -1.03
HERC4-207ENST00000460168 C20orf204Q6ZNR8 217 aa8.63□□□□□ -1.03
HERC4-207ENST00000460168 ZNF808Q8N4W9 903 aaPredicted RBP8.63□□□□□ -1.03
HERC4-207ENST00000460168 MRPL30Q8TCC3 161 aaKnown RBP8.63□□□□□ -1.03
HERC4-207ENST00000460168 Q8WTZ3 238 aa8.63□□□□□ -1.03
HERC4-207ENST00000460168 DYNLRB1Q9NP97 96 aa8.63□□□□□ -1.03
HERC4-207ENST00000460168 LAMTOR2Q9Y2Q5 125 aa8.63□□□□□ -1.03
HERC4-207ENST00000460168 PSPNO60542 156 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 CXCL1P09341 107 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 TPT1P13693 172 aaKnown RBP8.62□□□□□ -1.03
HERC4-207ENST00000460168 LMO1P25800 156 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 SMAGPQ0VAQ4 97 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 DHRS2Q13268 280 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 LTC4SQ16873 150 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 TMEM183BQ1AE95 376 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 UNQ5815/PRO19632Q6UWF5 114 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 Q6ZS49 121 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 LGI3Q8N145 548 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 MUC20Q8N307 709 aaPredicted RBP8.62□□□□□ -1.03
HERC4-207ENST00000460168 FER1L6-AS1Q8NA97 138 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 PLPPR1Q8TBJ4 325 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 ITLN2Q8WWU7 325 aaPredicted RBP8.62□□□□□ -1.03
HERC4-207ENST00000460168 SAP30LQ9HAJ7 183 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 RAB18Q9NP72 206 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 RNF7Q9UBF6 113 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 TRAPPC2LQ9UL33 140 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 SLC45A2Q9UMX9 530 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 WIPI2Q9Y4P8 454 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 HCFC1P51610 2035 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 CEACAM18A8MTB9 384 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.62□□□□□ -1.03
HERC4-207ENST00000460168 IFNL4K9M1U5 179 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 TFF1P04155 84 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 ADH4P08319 380 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 SCTP09683 121 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 PSG2P11465 335 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 PI3P19957 117 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 FCGR2CP31995 323 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 ECI1P42126 302 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 GABRA2P47869 451 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 PLP1P60201 277 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 UBE2MP61081 183 aaKnown RBP8.62□□□□□ -1.03
HERC4-207ENST00000460168 COL10A1Q03692 680 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 TESK1Q15569 626 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 ZNF497Q6ZNH5 498 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 SLC25A42Q86VD7 318 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 FAM90A1Q86YD7 464 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 OR8I2Q8N0Y5 310 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 ADAD2Q8NCV1 583 aaKnown RBP8.62□□□□□ -1.03
HERC4-207ENST00000460168 SNX22Q96L94 193 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 MS4A5Q9H3V2 200 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 C5orf66Q9H5L9 145 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 BET1LQ9NYM9 111 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 GPR132Q9UNW8 380 aa8.62□□□□□ -1.03
HERC4-207ENST00000460168 IGHV3OR15-7A0A075B7D8 119 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.61□□□□□ -1.03
HERC4-207ENST00000460168 TRBV6-6A0A0A6YYG2 114 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 TMEM213A2RRL7 107 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 DEFB108AA8MXU0 73 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 CDS2O95674 445 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 LHBP01229 141 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 CD8AP01732 235 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 PRDX2P32119 198 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 PIGPP57054 158 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 TAS2R31P59538 309 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 FXYD4P59646 89 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 PPP1R1AQ13522 171 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 TMEM128Q5BJH2 165 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 MOB1BQ7L9L4 216 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 ZFYVE26Q68DK2 2539 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 LRRC30A6NM36 301 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 CD55P08174 381 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 SNCAP37840 140 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 HERV-K104P61576 105 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 PAFAH1B2P68402 229 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 HLA-DRB3P79483 266 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 ZNF672Q499Z4 452 aaPredicted RBP8.61□□□□□ -1.03
HERC4-207ENST00000460168 FAM201AQ5SY85 155 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 MUC15Q8N387 334 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 CD177Q8N6Q3 437 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 SECTM1Q8WVN6 248 aa8.61□□□□□ -1.03
HERC4-207ENST00000460168 IL1F10Q8WWZ1 152 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms