RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 ZNF320A2RRD8 509 aa10.26□□□□□ -0.77
LINC00959-201ENST00000456581 MARCH11A6NNE9 402 aa10.26□□□□□ -0.77
LINC00959-201ENST00000456581 C15orf62A8K5M9 175 aa10.26□□□□□ -0.77
LINC00959-201ENST00000456581 PROP1O75360 226 aa10.26□□□□□ -0.77
LINC00959-201ENST00000456581 TIMP3P35625 211 aa10.26□□□□□ -0.77
LINC00959-201ENST00000456581 CDC34P49427 236 aaPredicted RBP10.26□□□□□ -0.77
LINC00959-201ENST00000456581 PAX5Q02548 391 aa10.26□□□□□ -0.77
LINC00959-201ENST00000456581 ACTL10Q5JWF8 245 aa10.26□□□□□ -0.77
LINC00959-201ENST00000456581 LINC01551Q86U37 167 aa10.26□□□□□ -0.77
LINC00959-201ENST00000456581 CD177Q8N6Q3 437 aa10.26□□□□□ -0.77
LINC00959-201ENST00000456581 SSMEM1Q8WWF3 244 aa10.26□□□□□ -0.77
LINC00959-201ENST00000456581 ACTR3CQ9C0K3 210 aaPredicted RBP10.26□□□□□ -0.77
LINC00959-201ENST00000456581 ASH1LQ9NR48 2969 aaKnown RBP10.26□□□□□ -0.77
LINC00959-201ENST00000456581 Q9UFV3 132 aa10.26□□□□□ -0.77
LINC00959-201ENST00000456581 RNF114Q9Y508 228 aa10.26□□□□□ -0.77
LINC00959-201ENST00000456581 AKAP6Q13023 2319 aa10.26□□□□□ -0.77
LINC00959-201ENST00000456581 A8MXE2 369 aa10.26□□□□□ -0.77
LINC00959-201ENST00000456581 RRHO14718 337 aa10.26□□□□□ -0.77
LINC00959-201ENST00000456581 SCGB1D1O95968 90 aa10.26□□□□□ -0.77
LINC00959-201ENST00000456581 MYOD1P15172 320 aa10.26□□□□□ -0.77
LINC00959-201ENST00000456581 CEACAM8P31997 349 aaPredicted RBP10.26□□□□□ -0.77
LINC00959-201ENST00000456581 EIF4EBP1Q13541 118 aaPredicted RBP10.26□□□□□ -0.77
LINC00959-201ENST00000456581 TBR1Q16650 682 aa10.26□□□□□ -0.77
LINC00959-201ENST00000456581 TIMM23BQ5SRD1 257 aa10.26□□□□□ -0.77
LINC00959-201ENST00000456581 MBNL2Q5VZF2 373 aaKnown RBP10.26□□□□□ -0.77
LINC00959-201ENST00000456581 MOB1BQ7L9L4 216 aa10.26□□□□□ -0.77
LINC00959-201ENST00000456581 ZNF709Q8N972 641 aa10.26□□□□□ -0.77
LINC00959-201ENST00000456581 OR5R1Q8NH85 324 aa10.26□□□□□ -0.77
LINC00959-201ENST00000456581 Q8TCH9 128 aa10.26□□□□□ -0.77
LINC00959-201ENST00000456581 NEIL1Q96FI4 390 aaPredicted RBP10.26□□□□□ -0.77
LINC00959-201ENST00000456581 TMEM30CPA0ZSE6 113 aa10.25□□□□□ -0.77
LINC00959-201ENST00000456581 DVL1O14640 695 aa10.25□□□□□ -0.77
LINC00959-201ENST00000456581 FCGR3BO75015 233 aa10.25□□□□□ -0.77
LINC00959-201ENST00000456581 TDGF1P3P51864 188 aa10.25□□□□□ -0.77
LINC00959-201ENST00000456581 RPL39P5Q59GN2 51 aa10.25□□□□□ -0.77
LINC00959-201ENST00000456581 ZCCHC24Q8N2G6 241 aaKnown RBP10.25□□□□□ -0.77
LINC00959-201ENST00000456581 ABHD12Q8N2K0 398 aa10.25□□□□□ -0.77
LINC00959-201ENST00000456581 TMEM170AQ8WVE7 144 aa10.25□□□□□ -0.77
LINC00959-201ENST00000456581 NINJ1Q92982 152 aa10.25□□□□□ -0.77
LINC00959-201ENST00000456581 LURAP1Q96LR2 239 aa10.25□□□□□ -0.77
LINC00959-201ENST00000456581 OR2V2Q96R30 315 aa10.25□□□□□ -0.77
LINC00959-201ENST00000456581 NDUFAF3Q9BU61 184 aa10.25□□□□□ -0.77
LINC00959-201ENST00000456581 POLR3KQ9Y2Y1 108 aaPredicted RBP10.25□□□□□ -0.77
LINC00959-201ENST00000456581 PPIAL4AQ9Y536 164 aa10.25□□□□□ -0.77
LINC00959-201ENST00000456581 TMEM8BA6NDV4 472 aa10.25□□□□□ -0.77
LINC00959-201ENST00000456581 SLC17A3O00476 420 aa10.25□□□□□ -0.77
LINC00959-201ENST00000456581 SPATA31B1PQ5VZV4 182 aa10.25□□□□□ -0.77
LINC00959-201ENST00000456581 MIC13Q5XKP0 118 aa10.25□□□□□ -0.77
LINC00959-201ENST00000456581 MOGAT3Q86VF5 341 aa10.25□□□□□ -0.77
LINC00959-201ENST00000456581 SNRNP40Q96DI7 357 aaKnown RBP10.25□□□□□ -0.77
LINC00959-201ENST00000456581 DCAF16Q9NXF7 216 aa10.25□□□□□ -0.77
LINC00959-201ENST00000456581 OR6C3Q9NZP0 311 aa10.25□□□□□ -0.77
LINC00959-201ENST00000456581 ITPR1Q14643 2758 aa10.25□□□□□ -0.77
LINC00959-201ENST00000456581 TANC2Q9HCD6 1990 aa10.25□□□□□ -0.77
LINC00959-201ENST00000456581 SCO2A0A1W2PP80 73 aa10.25□□□□□ -0.77
LINC00959-201ENST00000456581 TMEM250H0YL14 139 aa10.25□□□□□ -0.77
LINC00959-201ENST00000456581 SPINK4O60575 86 aa10.25□□□□□ -0.77
LINC00959-201ENST00000456581 ARL14EPLP0DKL9 152 aa10.25□□□□□ -0.77
LINC00959-201ENST00000456581 C1orf229Q6ZS94 237 aaPredicted RBP10.25□□□□□ -0.77
LINC00959-201ENST00000456581 C2orf88Q9BSF0 95 aa10.25□□□□□ -0.77
LINC00959-201ENST00000456581 MRPL37Q9BZE1 423 aaKnown RBP10.25□□□□□ -0.77
LINC00959-201ENST00000456581 TP53TG3Q9ULZ0 132 aa10.25□□□□□ -0.77
LINC00959-201ENST00000456581 MSMO1Q15800 293 aa10.24□□□□□ -0.77
LINC00959-201ENST00000456581 HLA-DRB5Q30154 266 aa10.24□□□□□ -0.77
LINC00959-201ENST00000456581 KRTCAP3Q53RY4 240 aa10.24□□□□□ -0.77
LINC00959-201ENST00000456581 DNLZQ5SXM8 178 aa10.24□□□□□ -0.77
LINC00959-201ENST00000456581 DUX4L9Q6RFH8 374 aaPredicted RBP10.24□□□□□ -0.77
LINC00959-201ENST00000456581 GFRALQ6UXV0 394 aa10.24□□□□□ -0.77
LINC00959-201ENST00000456581 CENPVQ7Z7K6 275 aaPredicted RBP10.24□□□□□ -0.77
LINC00959-201ENST00000456581 ZNRF1Q8ND25 227 aa10.24□□□□□ -0.77
LINC00959-201ENST00000456581 NEU1Q99519 415 aa10.24□□□□□ -0.77
LINC00959-201ENST00000456581 IGKV1D-17A0A075B6S4 117 aa10.24□□□□□ -0.77
LINC00959-201ENST00000456581 LINC00310P59036 64 aa10.24□□□□□ -0.77
LINC00959-201ENST00000456581 SGMS2Q8NHU3 365 aa10.24□□□□□ -0.77
LINC00959-201ENST00000456581 ITLN1Q8WWA0 313 aa10.24□□□□□ -0.77
LINC00959-201ENST00000456581 TIMM9Q9Y5J7 89 aa10.24□□□□□ -0.77
LINC00959-201ENST00000456581 RNF212BA8MTL3 300 aa10.23□□□□□ -0.77
LINC00959-201ENST00000456581 FAM90A26D6RGX4 464 aa10.23□□□□□ -0.77
LINC00959-201ENST00000456581 GGCTO75223 188 aaKnown RBP10.23□□□□□ -0.77
LINC00959-201ENST00000456581 FOXH1O75593 365 aa10.23□□□□□ -0.77
LINC00959-201ENST00000456581 CLDN14O95500 239 aa10.23□□□□□ -0.77
LINC00959-201ENST00000456581 WNT2P09544 360 aa10.23□□□□□ -0.77
LINC00959-201ENST00000456581 CBLN1P23435 193 aa10.23□□□□□ -0.77
LINC00959-201ENST00000456581 CDKN1AP38936 164 aa10.23□□□□□ -0.77
LINC00959-201ENST00000456581 RPL29P47914 159 aaKnown RBP10.23□□□□□ -0.77
LINC00959-201ENST00000456581 WFDC8Q8IUA0 241 aa10.23□□□□□ -0.77
LINC00959-201ENST00000456581 GCSAMQ8N6F7 178 aa10.23□□□□□ -0.77
LINC00959-201ENST00000456581 RNASEH2CQ8TDP1 164 aaKnown RBP10.23□□□□□ -0.77
LINC00959-201ENST00000456581 R3HDM4Q96D70 268 aa10.23□□□□□ -0.77
LINC00959-201ENST00000456581 SFXN3Q9BWM7 321 aa10.23□□□□□ -0.77
LINC00959-201ENST00000456581 TRAPPC1Q9Y5R8 145 aa10.23□□□□□ -0.77
LINC00959-201ENST00000456581 NAV3Q8IVL0 2385 aa10.23□□□□□ -0.77
LINC00959-201ENST00000456581 DYSFO75923 2080 aa10.23□□□□□ -0.77
LINC00959-201ENST00000456581 PRRG2O14669 202 aa10.23□□□□□ -0.77
LINC00959-201ENST00000456581 CD1BP29016 333 aa10.23□□□□□ -0.77
LINC00959-201ENST00000456581 ADMP35318 185 aa10.23□□□□□ -0.77
LINC00959-201ENST00000456581 ZNF134P52741 427 aa10.23□□□□□ -0.77
LINC00959-201ENST00000456581 KLF3P57682 345 aaPredicted RBP10.23□□□□□ -0.77
LINC00959-201ENST00000456581 SMIM21Q3B7S5 101 aa10.23□□□□□ -0.77
LINC00959-201ENST00000456581 DEFB108BQ8NET1 73 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms