RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 ZNF253O75346 499 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 CNMDO75829 334 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 NDUFB6O95139 128 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 UBL3O95164 117 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 C1orf105O95561 183 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 SOD1P00441 154 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 HPNP05981 417 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 EIF4EP06730 217 aaKnown RBP1.54□□□□□ -2.16
LINC02540-201ENST00000455554 AKAIN1P0CW23 69 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 ZNF728P0DKX0 622 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 C8orf88P0DMB2 117 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 CYBAP13498 195 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 HIST1H1CP16403 213 aaKnown RBP1.54□□□□□ -2.16
LINC02540-201ENST00000455554 ZNF17P17021 662 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 TCN2P20062 427 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 VDAC1P21796 283 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 RPS4Y1P22090 263 aaKnown RBP1.54□□□□□ -2.16
LINC02540-201ENST00000455554 USF1P22415 310 aaPredicted RBP1.54□□□□□ -2.16
LINC02540-201ENST00000455554 HIST1H1TP22492 207 aaPredicted RBP1.54□□□□□ -2.16
LINC02540-201ENST00000455554 PRDX3P30048 256 aaKnown RBP1.54□□□□□ -2.16
LINC02540-201ENST00000455554 PYCR1P32322 319 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 GLRXP35754 106 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 GUCA1AP43080 201 aaPredicted RBP1.54□□□□□ -2.16
LINC02540-201ENST00000455554 P2RX1P51575 399 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 SLC25A1P53007 311 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 TCL1AP56279 114 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 CAV3P56539 151 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 TAS2R20P59543 309 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 YPEL3P61236 119 aaPredicted RBP1.54□□□□□ -2.16
LINC02540-201ENST00000455554 RHOAP61586 193 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 PSG4Q00888 419 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 BCL2L1Q07817 233 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 C1DQ13901 141 aaKnown RBP1.54□□□□□ -2.16
LINC02540-201ENST00000455554 PAFAH1B3Q15102 231 aaKnown RBP1.54□□□□□ -2.16
LINC02540-201ENST00000455554 ACOT6Q3I5F7 207 aaPredicted RBP1.54□□□□□ -2.16
LINC02540-201ENST00000455554 NSUN5P1Q3KNT7 163 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 SPATA45Q537H7 98 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 CLEC12AQ5QGZ9 265 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 HBMQ6B0K9 141 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 OR2T5Q6IEZ7 315 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 ARL9Q6T311 187 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 GLIPR1L1Q6UWM5 242 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 Q6ZSR3 168 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 ZNF621Q6ZSS3 439 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 SLC25A48Q6ZT89 311 aaKnown RBP1.54□□□□□ -2.16
LINC02540-201ENST00000455554 COMMD6Q7Z4G1 85 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 LRP11Q86VZ4 500 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 TGIF2LYQ8IUE0 185 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 BLIDQ8IZY5 108 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 CA13Q8N1Q1 262 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 OSR2Q8N2R0 312 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 LRRC25Q8N386 305 aaPredicted RBP1.54□□□□□ -2.16
LINC02540-201ENST00000455554 RNF175Q8N4F7 328 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 TTC9CQ8N5M4 171 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 ZNF709Q8N972 641 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 C8orf31Q8N9H6 132 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 SUMF2Q8NBJ7 301 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 INO80EQ8NBZ0 244 aaPredicted RBP1.54□□□□□ -2.16
LINC02540-201ENST00000455554 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.54□□□□□ -2.16
LINC02540-201ENST00000455554 ZNF439Q8NDP4 499 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 OR8G5Q8NG78 346 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 OR5A1Q8NGJ0 315 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 OR51A2Q8NGJ7 313 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 OR5AR1Q8NGP9 310 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 OR6K2Q8NGY2 324 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 OR2T29Q8NH02 315 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 OR4A5Q8NH83 315 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 OR13C6PQ8NH95 151 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 MFSD8Q8NHS3 518 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 SLC25A40Q8TBP6 338 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 DOK4Q8TEW6 326 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 RNF138Q8WVD3 245 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 SMIM4Q8WVI0 70 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 PP6455Q8WZ26 134 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 NDRG1Q92597 394 aaKnown RBP1.54□□□□□ -2.16
LINC02540-201ENST00000455554 ZMYND19Q96E35 227 aaPredicted RBP1.54□□□□□ -2.16
LINC02540-201ENST00000455554 IMP4Q96G21 291 aaKnown RBP1.54□□□□□ -2.16
LINC02540-201ENST00000455554 SEC22AQ96IW7 307 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 ADTRPQ96IZ2 230 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 ATP5SQ99766 215 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 HSPB9Q9BQS6 159 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 SLC25A21Q9BQT8 299 aaPredicted RBP1.54□□□□□ -2.16
LINC02540-201ENST00000455554 SNRNP25Q9BV90 132 aaKnown RBP1.54□□□□□ -2.16
LINC02540-201ENST00000455554 TMEM59Q9BXS4 323 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 EBPLQ9BY08 206 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 SRXN1Q9BYN0 137 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 DPY30Q9C005 99 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 POLR2J2Q9GZM3 115 aaKnown RBP1.54□□□□□ -2.16
LINC02540-201ENST00000455554 TMEM133Q9H2Q1 129 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 BANF2Q9H503 90 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 ENY2Q9NPA8 101 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 KCNJ16Q9NPI9 418 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 TMEM242Q9NWH2 141 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 CLN6Q9NWW5 311 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 ZNF581Q9P0T4 197 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 ANXA10Q9UJ72 324 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 MCTS1Q9ULC4 181 aaKnown RBP1.54□□□□□ -2.16
LINC02540-201ENST00000455554 CYSLTR1Q9Y271 337 aa1.54□□□□□ -2.16
LINC02540-201ENST00000455554 ZNF443Q9Y2A4 671 aaPredicted RBP1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms