RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 TMEM190Q8WZ59 177 aa4.42□□□□□ -1.7
HLA-DPA3-207ENST00000454398 EEF1AKMT3Q96AZ1 226 aa4.42□□□□□ -1.7
HLA-DPA3-207ENST00000454398 ADTRPQ96IZ2 230 aa4.42□□□□□ -1.7
HLA-DPA3-207ENST00000454398 KRTAP4-5Q9BYR2 181 aa4.42□□□□□ -1.7
HLA-DPA3-207ENST00000454398 HRASLSQ9HDD0 168 aa4.42□□□□□ -1.7
HLA-DPA3-207ENST00000454398 SLC2A9Q9NRM0 540 aa4.42□□□□□ -1.7
HLA-DPA3-207ENST00000454398 MRPS7Q9Y2R9 242 aaKnown RBP4.42□□□□□ -1.7
HLA-DPA3-207ENST00000454398 AGRNO00468 2067 aa4.42□□□□□ -1.7
HLA-DPA3-207ENST00000454398 MUC4Q99102 2169 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 SULT1C2O00338 296 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 XRCC3O43542 346 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 SSX5O60225 188 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 PFDN1O60925 122 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 IGHV3-48P01763 117 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 RRASP10301 218 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 CD36P16671 472 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 HLA-GP17693 338 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 TALDO1P37837 337 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 PSMD7P51665 324 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 MFAP2P55001 183 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 AQP4P55087 323 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 OR2B8PP59922 312 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 RPL8P62917 257 aaKnown RBP4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 EIF4EBP1Q13541 118 aaPredicted RBP4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 SSX1Q16384 188 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 FAM106AQ4KMX7 169 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 OGFRL1Q5TC84 451 aaPredicted RBP4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 TMEM17Q86X19 198 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 GPHB5Q86YW7 130 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 PUSL1Q8N0Z8 303 aaKnown RBP4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 GBGT1Q8N5D6 347 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 OR51H1Q8NH63 302 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 TMEM167AQ8TBQ9 72 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 ZNF502Q8TBZ5 544 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 LGALS14Q8TCE9 139 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 CD300LFQ8TDQ1 290 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 SECTM1Q8WVN6 248 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 RNF183Q96D59 192 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 OR2A7Q96R45 310 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 CHRDL1Q9BU40 450 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 CCDC90BQ9GZT6 254 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 ATG5Q9H1Y0 275 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 OR51E2Q9H255 320 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 PLCXD1Q9NUJ7 323 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 KLK5Q9Y337 293 aaPredicted RBP4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 PRELID3BQ9Y3B1 194 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 OR2W1Q9Y3N9 320 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 V9GY05 133 aa4.41□□□□□ -1.7
HLA-DPA3-207ENST00000454398 IGHV3-66A0A0C4DH42 116 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 MEIS3P1A6NDR6 274 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 IFITM5A6NNB3 132 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 F8W735 103 aaPredicted RBP4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 TGOLN2O43493 480 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 ARL6IP5O75915 188 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 CA1P00915 261 aaPredicted RBP4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 CRYGCP07315 174 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 CTSDP07339 412 aaPredicted RBP4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 GADD45AP24522 165 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 FXYD4P59646 89 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 WT1-ASQ06250 92 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 TPBGQ13641 420 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 RBMS2Q15434 407 aaKnown RBP4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 FAM209BQ5JX69 171 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 LEMD1Q68G75 181 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 C22orf42Q6IC83 251 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 PLET1Q6UQ28 207 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 Q6ZWC4 215 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 SLC25A42Q86VD7 318 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 FAM24BQ8N5W8 94 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 OR2C3Q8N628 320 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 PACRGLQ8N7B6 248 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 GVQW1Q8N7I0 195 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 STPG3Q8N7X2 389 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 OR13F1Q8NGS4 319 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 RNF2Q99496 336 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 SPAG8Q99932 426 aaPredicted RBP4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 SCRT1Q9BWW7 348 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 HINT2Q9BX68 163 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 DAZ1Q9NQZ3 744 aaKnown RBP4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 CCL28Q9NRJ3 127 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 TMEM140Q9NV12 185 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 RAB22AQ9UL26 194 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 TP53TG1Q9Y2A0 90 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 NSG2Q9Y328 171 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 DNAH5Q8TE73 4624 aa4.4□□□□□ -1.71
HLA-DPA3-207ENST00000454398 IGLL5B9A064 214 aa4.39□□□□□ -1.71
HLA-DPA3-207ENST00000454398 TSPAN4O14817 238 aa4.39□□□□□ -1.71
HLA-DPA3-207ENST00000454398 RGS10O43665 173 aa4.39□□□□□ -1.71
HLA-DPA3-207ENST00000454398 HLA-DQB1P01920 261 aa4.39□□□□□ -1.71
HLA-DPA3-207ENST00000454398 RLN1P04808 185 aa4.39□□□□□ -1.71
HLA-DPA3-207ENST00000454398 C8orf88P0DMB2 117 aa4.39□□□□□ -1.71
HLA-DPA3-207ENST00000454398 OR13C7P0DN81 318 aa4.39□□□□□ -1.71
HLA-DPA3-207ENST00000454398 DTYMKP23919 212 aa4.39□□□□□ -1.71
HLA-DPA3-207ENST00000454398 ADMP35318 185 aa4.39□□□□□ -1.71
HLA-DPA3-207ENST00000454398 GNG2P59768 71 aa4.39□□□□□ -1.71
HLA-DPA3-207ENST00000454398 MLLT11Q13015 90 aaPredicted RBP4.39□□□□□ -1.71
HLA-DPA3-207ENST00000454398 ANKRD55Q3KP44 614 aa4.39□□□□□ -1.71
HLA-DPA3-207ENST00000454398 CDNFQ49AH0 187 aa4.39□□□□□ -1.71
HLA-DPA3-207ENST00000454398 LGALS9CQ6DKI2 356 aa4.39□□□□□ -1.71
HLA-DPA3-207ENST00000454398 ZNF773Q6PK81 442 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms