RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 DHFRP00374 187 aa12.02□□□□□ -0.49
VPS8-213ENST00000453056 IGHV3-11P01762 117 aa12.02□□□□□ -0.49
VPS8-213ENST00000453056 SERPINE2P07093 398 aa12.02□□□□□ -0.49
VPS8-213ENST00000453056 PIGPP57054 158 aa12.02□□□□□ -0.49
VPS8-213ENST00000453056 PYDC2Q56P42 97 aa12.02□□□□□ -0.49
VPS8-213ENST00000453056 SPANXN2Q5MJ10 180 aa12.02□□□□□ -0.49
VPS8-213ENST00000453056 THOC7Q6I9Y2 204 aaKnown RBP12.02□□□□□ -0.49
VPS8-213ENST00000453056 REC114Q7Z4M0 266 aa12.02□□□□□ -0.49
VPS8-213ENST00000453056 OR4C16Q8NGL9 310 aa12.02□□□□□ -0.49
VPS8-213ENST00000453056 USMG5Q96IX5 58 aa12.02□□□□□ -0.49
VPS8-213ENST00000453056 PRRT1Q99946 306 aa12.02□□□□□ -0.49
VPS8-213ENST00000453056 SOSTQ9BQB4 213 aa12.02□□□□□ -0.49
VPS8-213ENST00000453056 FAM223BA6NKX1 122 aa12.01□□□□□ -0.49
VPS8-213ENST00000453056 LINC01619G3V211 115 aa12.01□□□□□ -0.49
VPS8-213ENST00000453056 SNAPC5O75971 98 aa12.01□□□□□ -0.49
VPS8-213ENST00000453056 ZNF735P0CB33 412 aa12.01□□□□□ -0.49
VPS8-213ENST00000453056 FAUP35544 74 aaKnown RBP12.01□□□□□ -0.49
VPS8-213ENST00000453056 AP3S2P59780 193 aa12.01□□□□□ -0.49
VPS8-213ENST00000453056 FAM223AQ8IWN6 122 aa12.01□□□□□ -0.49
VPS8-213ENST00000453056 CADM3Q8N126 398 aa12.01□□□□□ -0.49
VPS8-213ENST00000453056 TTC9CQ8N5M4 171 aa12.01□□□□□ -0.49
VPS8-213ENST00000453056 OR13C8Q8NGS7 320 aa12.01□□□□□ -0.49
VPS8-213ENST00000453056 TSC22D3Q99576 134 aa12.01□□□□□ -0.49
VPS8-213ENST00000453056 ZMAT5Q9UDW3 170 aaKnown RBP12.01□□□□□ -0.49
VPS8-213ENST00000453056 C14orf166Q9Y224 244 aaKnown RBP12.01□□□□□ -0.49
VPS8-213ENST00000453056 ANKRD20A5PA0PJZ0 165 aa12□□□□□ -0.49
VPS8-213ENST00000453056 HMX3A6NHT5 357 aa12□□□□□ -0.49
VPS8-213ENST00000453056 NPIPB5A8MRT5 1133 aa12□□□□□ -0.49
VPS8-213ENST00000453056 TEX22C9J3V5 150 aa12□□□□□ -0.49
VPS8-213ENST00000453056 H0Y980 276 aa12□□□□□ -0.49
VPS8-213ENST00000453056 KRASP01116 189 aa12□□□□□ -0.49
VPS8-213ENST00000453056 HSPB1P04792 205 aaKnown RBP12□□□□□ -0.49
VPS8-213ENST00000453056 CTSDP07339 412 aaPredicted RBP12□□□□□ -0.49
VPS8-213ENST00000453056 IL6RP08887 468 aaPredicted RBP12□□□□□ -0.49
VPS8-213ENST00000453056 RPA2P15927 270 aa12□□□□□ -0.49
VPS8-213ENST00000453056 PI3P19957 117 aa12□□□□□ -0.49
VPS8-213ENST00000453056 PTBP1P26599 531 aaKnown RBP eCLIP12□□□□□ -0.49
VPS8-213ENST00000453056 G6PCP35575 357 aa12□□□□□ -0.49
VPS8-213ENST00000453056 RHOGP84095 191 aa12□□□□□ -0.49
VPS8-213ENST00000453056 SURF2Q15527 256 aaPredicted RBP12□□□□□ -0.49
VPS8-213ENST00000453056 ZNF585BQ52M93 769 aa12□□□□□ -0.49
VPS8-213ENST00000453056 FAAP20Q6NZ36 180 aa12□□□□□ -0.49
VPS8-213ENST00000453056 SRSF8Q9BRL6 282 aaKnown RBP12□□□□□ -0.49
VPS8-213ENST00000453056 QTRT1Q9BXR0 403 aaKnown RBP12□□□□□ -0.49
VPS8-213ENST00000453056 ALX4Q9H161 411 aaPredicted RBP12□□□□□ -0.49
VPS8-213ENST00000453056 SCP2D1Q9UJQ7 156 aa12□□□□□ -0.49
VPS8-213ENST00000453056 PRNDQ9UKY0 176 aa12□□□□□ -0.49
VPS8-213ENST00000453056 SEC14L6B5MCN3 397 aa11.99□□□□□ -0.49
VPS8-213ENST00000453056 B3GALNT1O75752 331 aa11.99□□□□□ -0.49
VPS8-213ENST00000453056 ATG12O94817 140 aa11.99□□□□□ -0.49
VPS8-213ENST00000453056 ZP3P21754 424 aa11.99□□□□□ -0.49
VPS8-213ENST00000453056 OR2B8PP59922 312 aa11.99□□□□□ -0.49
VPS8-213ENST00000453056 FAM209BQ5JX69 171 aa11.99□□□□□ -0.49
VPS8-213ENST00000453056 C9orf66Q5T8R8 295 aa11.99□□□□□ -0.49
VPS8-213ENST00000453056 FOXB2Q5VYV0 432 aa11.99□□□□□ -0.49
VPS8-213ENST00000453056 Q8N402 240 aa11.99□□□□□ -0.49
VPS8-213ENST00000453056 NECAP1Q8NC96 275 aa11.99□□□□□ -0.49
VPS8-213ENST00000453056 OR1L8Q8NGR8 309 aa11.99□□□□□ -0.49
VPS8-213ENST00000453056 MARCH1Q8TCQ1 289 aa11.99□□□□□ -0.49
VPS8-213ENST00000453056 THAP7Q9BT49 309 aaPredicted RBP11.99□□□□□ -0.49
VPS8-213ENST00000453056 RANGRFQ9HD47 186 aaPredicted RBP11.99□□□□□ -0.49
VPS8-213ENST00000453056 MCUBQ9NWR8 336 aa11.99□□□□□ -0.49
VPS8-213ENST00000453056 FKBP11Q9NYL4 201 aa11.99□□□□□ -0.49
VPS8-213ENST00000453056 V9GYH0 126 aa11.99□□□□□ -0.49
VPS8-213ENST00000453056 IGHV4OR15-8A0A075B7B6 117 aa11.98□□□□□ -0.49
VPS8-213ENST00000453056 A0A087WW49 117 aa11.98□□□□□ -0.49
VPS8-213ENST00000453056 TRAV3A0A0B4J244 114 aa11.98□□□□□ -0.49
VPS8-213ENST00000453056 CYB5BO43169 146 aa11.98□□□□□ -0.49
VPS8-213ENST00000453056 DEFA4P12838 97 aa11.98□□□□□ -0.49
VPS8-213ENST00000453056 PSMB6P28072 239 aa11.98□□□□□ -0.49
VPS8-213ENST00000453056 ATP5G2Q06055 141 aa11.98□□□□□ -0.49
VPS8-213ENST00000453056 PDLIM3Q53GG5 364 aaPredicted RBP11.98□□□□□ -0.49
VPS8-213ENST00000453056 H2BFWTQ7Z2G1 175 aa11.98□□□□□ -0.49
VPS8-213ENST00000453056 HSD17B13Q7Z5P4 300 aaPredicted RBP11.98□□□□□ -0.49
VPS8-213ENST00000453056 CCDC190Q86UF4 302 aa11.98□□□□□ -0.49
VPS8-213ENST00000453056 OR51S1Q8NGJ8 323 aa11.98□□□□□ -0.49
VPS8-213ENST00000453056 SCGB3A2Q96PL1 93 aa11.98□□□□□ -0.49
VPS8-213ENST00000453056 SLC2A8Q9NY64 477 aa11.98□□□□□ -0.49
VPS8-213ENST00000453056 DNAH3Q8TD57 4116 aa11.97□□□□□ -0.49
VPS8-213ENST00000453056 C3orf85A0A1B0GTC6 90 aa11.97□□□□□ -0.49
VPS8-213ENST00000453056 OVOL1O14753 267 aa11.97□□□□□ -0.49
VPS8-213ENST00000453056 PRH1P02810 166 aa11.97□□□□□ -0.49
VPS8-213ENST00000453056 MYOD1P15172 320 aa11.97□□□□□ -0.49
VPS8-213ENST00000453056 AREGP15514 252 aa11.97□□□□□ -0.49
VPS8-213ENST00000453056 HIST1H1BP16401 226 aaKnown RBP11.97□□□□□ -0.49
VPS8-213ENST00000453056 AKR1C2P52895 323 aa11.97□□□□□ -0.49
VPS8-213ENST00000453056 SLURP1P55000 103 aa11.97□□□□□ -0.49
VPS8-213ENST00000453056 DEFA5Q01523 94 aa11.97□□□□□ -0.49
VPS8-213ENST00000453056 EXOSC2Q13868 293 aaKnown RBP11.97□□□□□ -0.49
VPS8-213ENST00000453056 TRIM16LQ309B1 348 aa11.97□□□□□ -0.49
VPS8-213ENST00000453056 OR4A16Q8NH70 328 aa11.97□□□□□ -0.49
VPS8-213ENST00000453056 TRIM63Q969Q1 353 aa11.97□□□□□ -0.49
VPS8-213ENST00000453056 MRGPRFQ96AM1 343 aa11.97□□□□□ -0.49
VPS8-213ENST00000453056 AKIP1Q9NQ31 210 aa11.97□□□□□ -0.49
VPS8-213ENST00000453056 OR51B2Q9Y5P1 312 aa11.97□□□□□ -0.49
VPS8-213ENST00000453056 TRBV9A0A0B4J1U6 114 aa11.96□□□□□ -0.49
VPS8-213ENST00000453056 TEX13DA0A0J9YY54 714 aaPredicted RBP11.96□□□□□ -0.49
VPS8-213ENST00000453056 A0A1B0GW64 132 aa11.96□□□□□ -0.49
VPS8-213ENST00000453056 IGLC7A0M8Q6 106 aa11.96□□□□□ -0.49
VPS8-213ENST00000453056 ANKRD34BA5PLL1 514 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms