RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 SHPKQ9UHJ6 478 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 LINC00527Q9UJ94 153 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 FBXO7Q9Y3I1 522 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 ANK2Q01484 3957 aa9.36□□□□□ -0.91
LINC00339-205ENST00000452322 C15orf61A6NNL5 157 aa9.36□□□□□ -0.91
LINC00339-205ENST00000452322 DUS4LO95620 317 aaKnown RBP9.36□□□□□ -0.91
LINC00339-205ENST00000452322 EGR2P11161 476 aaPredicted RBP9.36□□□□□ -0.91
LINC00339-205ENST00000452322 VDAC1P21796 283 aa9.36□□□□□ -0.91
LINC00339-205ENST00000452322 RAB25P57735 213 aa9.36□□□□□ -0.91
LINC00339-205ENST00000452322 TMEM267Q0VDI3 215 aaPredicted RBP9.36□□□□□ -0.91
LINC00339-205ENST00000452322 ANKRD55Q3KP44 614 aa9.36□□□□□ -0.91
LINC00339-205ENST00000452322 COQ8AQ8NI60 647 aa9.36□□□□□ -0.91
LINC00339-205ENST00000452322 GRPEL2Q8TAA5 225 aa9.36□□□□□ -0.91
LINC00339-205ENST00000452322 WIPF2Q8TF74 440 aaPredicted RBP9.36□□□□□ -0.91
LINC00339-205ENST00000452322 WFDC12Q8WWY7 111 aa9.36□□□□□ -0.91
LINC00339-205ENST00000452322 MDFIQ99750 246 aa9.36□□□□□ -0.91
LINC00339-205ENST00000452322 MARVELD1Q9BSK0 173 aa9.36□□□□□ -0.91
LINC00339-205ENST00000452322 FAM103A1Q9BTL3 118 aaKnown RBP9.36□□□□□ -0.91
LINC00339-205ENST00000452322 COMMD5Q9GZQ3 224 aa9.36□□□□□ -0.91
LINC00339-205ENST00000452322 FKBP11Q9NYL4 201 aa9.36□□□□□ -0.91
LINC00339-205ENST00000452322 PRNDQ9UKY0 176 aa9.36□□□□□ -0.91
LINC00339-205ENST00000452322 TRAV41A0A0B4J266 112 aa9.35□□□□□ -0.91
LINC00339-205ENST00000452322 A0A0G2JRQ6 117 aa9.35□□□□□ -0.91
LINC00339-205ENST00000452322 PSMB11A5LHX3 300 aa9.35□□□□□ -0.91
LINC00339-205ENST00000452322 INMT-MINDY4F8WBC2 141 aa9.35□□□□□ -0.91
LINC00339-205ENST00000452322 IL5P05113 134 aa9.35□□□□□ -0.91
LINC00339-205ENST00000452322 RPL27AP46776 148 aaKnown RBP9.35□□□□□ -0.91
LINC00339-205ENST00000452322 SLC35B1P78383 322 aa9.35□□□□□ -0.91
LINC00339-205ENST00000452322 CFHR3Q02985 330 aa9.35□□□□□ -0.91
LINC00339-205ENST00000452322 ECSCRQ19T08 205 aa9.35□□□□□ -0.91
LINC00339-205ENST00000452322 AKIRIN2Q53H80 203 aa9.35□□□□□ -0.91
LINC00339-205ENST00000452322 C19orf54Q5BKX5 351 aa9.35□□□□□ -0.91
LINC00339-205ENST00000452322 C10orf55Q5SWW7 151 aa9.35□□□□□ -0.91
LINC00339-205ENST00000452322 C12orf54Q6X4T0 127 aa9.35□□□□□ -0.91
LINC00339-205ENST00000452322 LYZL2Q7Z4W2 148 aa9.35□□□□□ -0.91
LINC00339-205ENST00000452322 CENPVQ7Z7K6 275 aaPredicted RBP9.35□□□□□ -0.91
LINC00339-205ENST00000452322 LFNGQ8NES3 379 aa9.35□□□□□ -0.91
LINC00339-205ENST00000452322 OR5B3Q8NH48 314 aa9.35□□□□□ -0.91
LINC00339-205ENST00000452322 OR4A16Q8NH70 328 aa9.35□□□□□ -0.91
LINC00339-205ENST00000452322 MITD1Q8WV92 249 aa9.35□□□□□ -0.91
LINC00339-205ENST00000452322 TMEM68Q96MH6 324 aa9.35□□□□□ -0.91
LINC00339-205ENST00000452322 SPIN2AQ99865 258 aa9.35□□□□□ -0.91
LINC00339-205ENST00000452322 SPIN2BQ9BPZ2 258 aa9.35□□□□□ -0.91
LINC00339-205ENST00000452322 TMEM14BQ9NUH8 114 aa9.35□□□□□ -0.91
LINC00339-205ENST00000452322 FOXA2Q9Y261 457 aaPredicted RBP9.35□□□□□ -0.91
LINC00339-205ENST00000452322 NSG2Q9Y328 171 aa9.35□□□□□ -0.91
LINC00339-205ENST00000452322 TENM1Q9UKZ4 2725 aa9.35□□□□□ -0.91
LINC00339-205ENST00000452322 MSGN1A6NI15 193 aa9.34□□□□□ -0.91
LINC00339-205ENST00000452322 G3V318 75 aa9.34□□□□□ -0.91
LINC00339-205ENST00000452322 PRAF2O60831 178 aa9.34□□□□□ -0.91
LINC00339-205ENST00000452322 MYOD1P15172 320 aa9.34□□□□□ -0.91
LINC00339-205ENST00000452322 PPIFP30405 207 aaKnown RBP9.34□□□□□ -0.91
LINC00339-205ENST00000452322 OR2B8PP59922 312 aa9.34□□□□□ -0.91
LINC00339-205ENST00000452322 IZUMO4Q1ZYL8 232 aa9.34□□□□□ -0.91
LINC00339-205ENST00000452322 RGS21Q2M5E4 152 aa9.34□□□□□ -0.91
LINC00339-205ENST00000452322 NMSQ5H8A3 153 aa9.34□□□□□ -0.91
LINC00339-205ENST00000452322 THOC7Q6I9Y2 204 aaKnown RBP9.34□□□□□ -0.91
LINC00339-205ENST00000452322 UNQ5815/PRO19632Q6UWF5 114 aa9.34□□□□□ -0.91
LINC00339-205ENST00000452322 ZNF429Q86V71 674 aa9.34□□□□□ -0.91
LINC00339-205ENST00000452322 COMMD1Q8N668 190 aa9.34□□□□□ -0.91
LINC00339-205ENST00000452322 MINDY2Q8NBR6 621 aa9.34□□□□□ -0.91
LINC00339-205ENST00000452322 OR52B4Q8NGK2 314 aa9.34□□□□□ -0.91
LINC00339-205ENST00000452322 ZNF431Q8TF32 576 aaPredicted RBP9.34□□□□□ -0.91
LINC00339-205ENST00000452322 GPR146Q96CH1 333 aa9.34□□□□□ -0.91
LINC00339-205ENST00000452322 PHB2Q99623 299 aa9.34□□□□□ -0.91
LINC00339-205ENST00000452322 ZNF257Q9Y2Q1 563 aa9.34□□□□□ -0.91
LINC00339-205ENST00000452322 TMED3Q9Y3Q3 217 aa9.34□□□□□ -0.91
LINC00339-205ENST00000452322 OR51B2Q9Y5P1 312 aa9.34□□□□□ -0.91
LINC00339-205ENST00000452322 WSB1Q9Y6I7 421 aa9.34□□□□□ -0.91
LINC00339-205ENST00000452322 A0A0B4J293 547 aa9.33□□□□□ -0.92
LINC00339-205ENST00000452322 TEX50A0A1B0GTY4 177 aa9.33□□□□□ -0.92
LINC00339-205ENST00000452322 DBX1A6NMT0 343 aa9.33□□□□□ -0.92
LINC00339-205ENST00000452322 TEX22C9J3V5 150 aa9.33□□□□□ -0.92
LINC00339-205ENST00000452322 E7EUB6 86 aa9.33□□□□□ -0.92
LINC00339-205ENST00000452322 RBMXL2O75526 392 aaKnown RBP9.33□□□□□ -0.92
LINC00339-205ENST00000452322 DHFRP00374 187 aa9.33□□□□□ -0.92
LINC00339-205ENST00000452322 OPN1MWP04001 364 aa9.33□□□□□ -0.92
LINC00339-205ENST00000452322 OPN1MW2P0DN77 364 aa9.33□□□□□ -0.92
LINC00339-205ENST00000452322 OPN1MW3P0DN78 364 aa9.33□□□□□ -0.92
LINC00339-205ENST00000452322 SPNP16150 400 aa9.33□□□□□ -0.92
LINC00339-205ENST00000452322 AARDQ4LEZ3 155 aa9.33□□□□□ -0.92
LINC00339-205ENST00000452322 ASPHD1Q5U4P2 390 aa9.33□□□□□ -0.92
LINC00339-205ENST00000452322 Q6ZRM9 215 aa9.33□□□□□ -0.92
LINC00339-205ENST00000452322 ZNF329Q86UD4 541 aa9.33□□□□□ -0.92
LINC00339-205ENST00000452322 OR5AU1Q8NGC0 362 aa9.33□□□□□ -0.92
LINC00339-205ENST00000452322 OR4X2Q8NGF9 303 aa9.33□□□□□ -0.92
LINC00339-205ENST00000452322 OR5M8Q8NGP6 311 aa9.33□□□□□ -0.92
LINC00339-205ENST00000452322 OR1L8Q8NGR8 309 aa9.33□□□□□ -0.92
LINC00339-205ENST00000452322 FYTTD1Q96QD9 318 aaKnown RBP9.33□□□□□ -0.92
LINC00339-205ENST00000452322 SRSF8Q9BRL6 282 aaKnown RBP9.33□□□□□ -0.92
LINC00339-205ENST00000452322 SEC22CQ9BRL7 303 aa9.33□□□□□ -0.92
LINC00339-205ENST00000452322 ZNF747Q9BV97 191 aa9.33□□□□□ -0.92
LINC00339-205ENST00000452322 QTRT1Q9BXR0 403 aaKnown RBP9.33□□□□□ -0.92
LINC00339-205ENST00000452322 GPN1Q9HCN4 374 aaPredicted RBP9.33□□□□□ -0.92
LINC00339-205ENST00000452322 COA4Q9NYJ1 87 aa9.33□□□□□ -0.92
LINC00339-205ENST00000452322 CACNG5Q9UF02 275 aa9.33□□□□□ -0.92
LINC00339-205ENST00000452322 DNHD1Q96M86 4753 aa9.32□□□□□ -0.92
LINC00339-205ENST00000452322 A0A1B0GW64 132 aa9.32□□□□□ -0.92
LINC00339-205ENST00000452322 A0A1W2PN81 502 aa9.32□□□□□ -0.92
LINC00339-205ENST00000452322 CGB1A6NKQ9 187 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms