RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 TFF3Q07654 80 aa8.78□□□□□ -1
CTC1-202ENST00000449476 KIAA1644Q3SXP7 199 aa8.78□□□□□ -1
CTC1-202ENST00000449476 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.78□□□□□ -1
CTC1-202ENST00000449476 LHFPL1Q86WI0 220 aa8.78□□□□□ -1
CTC1-202ENST00000449476 RBM14Q96PK6 669 aaKnown RBP8.78□□□□□ -1
CTC1-202ENST00000449476 TMEM208Q9BTX3 173 aa8.78□□□□□ -1
CTC1-202ENST00000449476 IL6RP08887 468 aaPredicted RBP8.77□□□□□ -1
CTC1-202ENST00000449476 GTF3AQ92664 365 aaKnown RBP8.77□□□□□ -1
CTC1-202ENST00000449476 MYLKQ15746 1914 aa8.77□□□□□ -1
CTC1-202ENST00000449476 DIDO1Q9BTC0 2240 aaKnown RBP8.77□□□□□ -1.01
CTC1-202ENST00000449476 TRAV24A0A0B4J272 114 aa8.77□□□□□ -1.01
CTC1-202ENST00000449476 H3BTX0 84 aa8.77□□□□□ -1.01
CTC1-202ENST00000449476 CD40P25942 277 aa8.77□□□□□ -1.01
CTC1-202ENST00000449476 FCGR2BP31994 310 aaPredicted RBP8.77□□□□□ -1.01
CTC1-202ENST00000449476 CYP2G1PQ6ZSU1 146 aa8.77□□□□□ -1.01
CTC1-202ENST00000449476 SFRP2Q96HF1 295 aa8.77□□□□□ -1.01
CTC1-202ENST00000449476 CLEC7AQ9BXN2 247 aa8.77□□□□□ -1.01
CTC1-202ENST00000449476 RSPO3Q9BXY4 272 aaPredicted RBP8.77□□□□□ -1.01
CTC1-202ENST00000449476 HSPB7Q9UBY9 170 aa8.77□□□□□ -1.01
CTC1-202ENST00000449476 HEATR1Q9H583 2144 aaKnown RBP8.77□□□□□ -1.01
CTC1-202ENST00000449476 FGF16O43320 207 aa8.77□□□□□ -1.01
CTC1-202ENST00000449476 VENTXO95231 258 aa8.77□□□□□ -1.01
CTC1-202ENST00000449476 SRSF3P84103 164 aaKnown RBP8.77□□□□□ -1.01
CTC1-202ENST00000449476 Q1RN00 199 aa8.77□□□□□ -1.01
CTC1-202ENST00000449476 GGNQ86UU5 652 aa8.77□□□□□ -1.01
CTC1-202ENST00000449476 WDR31Q8NA23 367 aa8.77□□□□□ -1.01
CTC1-202ENST00000449476 RABAC1Q9UI14 185 aa8.77□□□□□ -1.01
CTC1-202ENST00000449476 SRCAPQ6ZRS2 3230 aa8.77□□□□□ -1.01
CTC1-202ENST00000449476 FAM106CPP0CH98 169 aa8.77□□□□□ -1.01
CTC1-202ENST00000449476 ID3Q02535 119 aa8.77□□□□□ -1.01
CTC1-202ENST00000449476 MUC15Q8N387 334 aa8.77□□□□□ -1.01
CTC1-202ENST00000449476 GUCD1Q96NT3 240 aa8.77□□□□□ -1.01
CTC1-202ENST00000449476 ZNF407Q9C0G0 2248 aa8.77□□□□□ -1.01
CTC1-202ENST00000449476 PCNX1Q96RV3 2341 aa8.77□□□□□ -1.01
CTC1-202ENST00000449476 PPOXP50336 477 aa8.76□□□□□ -1.01
CTC1-202ENST00000449476 SUPT4H1P63272 117 aaKnown RBP8.76□□□□□ -1.01
CTC1-202ENST00000449476 OR4A47Q6IF82 309 aa8.76□□□□□ -1.01
CTC1-202ENST00000449476 OSR1Q8TAX0 266 aaPredicted RBP8.76□□□□□ -1.01
CTC1-202ENST00000449476 RALYQ9UKM9 306 aaKnown RBP8.76□□□□□ -1.01
CTC1-202ENST00000449476 KBTBD11-OT1A0A1B0GTJ5 212 aa8.76□□□□□ -1.01
CTC1-202ENST00000449476 TMEM189A5PLL7 270 aa8.76□□□□□ -1.01
CTC1-202ENST00000449476 CD99P14209 185 aa8.76□□□□□ -1.01
CTC1-202ENST00000449476 ZNF25P17030 456 aaPredicted RBP8.76□□□□□ -1.01
CTC1-202ENST00000449476 FHL1Q13642 323 aa8.76□□□□□ -1.01
CTC1-202ENST00000449476 TMEM177Q53S58 311 aa8.76□□□□□ -1.01
CTC1-202ENST00000449476 SPANXN1Q5VSR9 72 aa8.76□□□□□ -1.01
CTC1-202ENST00000449476 PEAR1Q5VY43 1037 aaPredicted RBP8.76□□□□□ -1.01
CTC1-202ENST00000449476 DNM1P46Q6ZS02 220 aa8.76□□□□□ -1.01
CTC1-202ENST00000449476 SLC25A33Q9BSK2 321 aa8.76□□□□□ -1.01
CTC1-202ENST00000449476 GGACTQ9BVM4 153 aa8.76□□□□□ -1.01
CTC1-202ENST00000449476 HEATR5AQ86XA9 2040 aa8.76□□□□□ -1.01
CTC1-202ENST00000449476 C5orf63A6NC05 138 aa8.76□□□□□ -1.01
CTC1-202ENST00000449476 SFTPCP11686 197 aa8.76□□□□□ -1.01
CTC1-202ENST00000449476 TMPRSS3P57727 454 aa8.76□□□□□ -1.01
CTC1-202ENST00000449476 CLDND2Q8NHS1 167 aa8.76□□□□□ -1.01
CTC1-202ENST00000449476 EAF1Q96JC9 268 aaPredicted RBP8.76□□□□□ -1.01
CTC1-202ENST00000449476 WFIKKN1Q96NZ8 548 aa8.76□□□□□ -1.01
CTC1-202ENST00000449476 TMEM106BQ9NUM4 274 aa8.76□□□□□ -1.01
CTC1-202ENST00000449476 IGKV3D-15A0A087WSY6 115 aa8.76□□□□□ -1.01
CTC1-202ENST00000449476 LOC389332A0A1B0GUA5 103 aa8.76□□□□□ -1.01
CTC1-202ENST00000449476 GRIFINA4D1Z8 144 aa8.76□□□□□ -1.01
CTC1-202ENST00000449476 SRIP30626 198 aa8.76□□□□□ -1.01
CTC1-202ENST00000449476 MFAP4P55083 255 aa8.76□□□□□ -1.01
CTC1-202ENST00000449476 CENPWQ5EE01 88 aa8.76□□□□□ -1.01
CTC1-202ENST00000449476 UNQ5815/PRO19632Q6UWF5 114 aa8.76□□□□□ -1.01
CTC1-202ENST00000449476 RNF144BQ7Z419 303 aa8.76□□□□□ -1.01
CTC1-202ENST00000449476 PNKDQ8N490 385 aa8.76□□□□□ -1.01
CTC1-202ENST00000449476 MRPL32Q9BYC8 188 aaKnown RBP8.76□□□□□ -1.01
CTC1-202ENST00000449476 ELOVL5Q9NYP7 299 aa8.76□□□□□ -1.01
CTC1-202ENST00000449476 CREBBPQ92793 2442 aa8.75□□□□□ -1.01
CTC1-202ENST00000449476 SH2D7A6NKC9 451 aaPredicted RBP8.75□□□□□ -1.01
CTC1-202ENST00000449476 B9A039 149 aa8.75□□□□□ -1.01
CTC1-202ENST00000449476 LIPFP07098 398 aa8.75□□□□□ -1.01
CTC1-202ENST00000449476 SCGB1C2P0DMR2 95 aa8.75□□□□□ -1.01
CTC1-202ENST00000449476 PLAURQ03405 335 aa8.75□□□□□ -1.01
CTC1-202ENST00000449476 CACNA1BQ00975 2339 aa8.75□□□□□ -1.01
CTC1-202ENST00000449476 MOSP00540 346 aa8.75□□□□□ -1.01
CTC1-202ENST00000449476 IGFBP2P18065 325 aa8.75□□□□□ -1.01
CTC1-202ENST00000449476 RELBQ01201 579 aa8.75□□□□□ -1.01
CTC1-202ENST00000449476 WFDC3Q8IUB2 231 aa8.75□□□□□ -1.01
CTC1-202ENST00000449476 NLRC5Q86WI3 1866 aa8.75□□□□□ -1.01
CTC1-202ENST00000449476 IGKV1-27A0A075B6S5 117 aa8.75□□□□□ -1.01
CTC1-202ENST00000449476 IFITM10A6NMD0 228 aa8.75□□□□□ -1.01
CTC1-202ENST00000449476 LOXL3P58215 753 aa8.75□□□□□ -1.01
CTC1-202ENST00000449476 ZNF497Q6ZNH5 498 aa8.75□□□□□ -1.01
CTC1-202ENST00000449476 LRTM2Q8N967 370 aa8.75□□□□□ -1.01
CTC1-202ENST00000449476 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.75□□□□□ -1.01
CTC1-202ENST00000449476 LINC01560Q8TB33 94 aa8.75□□□□□ -1.01
CTC1-202ENST00000449476 PGLYRP4Q96LB8 373 aa8.75□□□□□ -1.01
CTC1-202ENST00000449476 SSBP3Q9BWW4 388 aaPredicted RBP8.75□□□□□ -1.01
CTC1-202ENST00000449476 IFI27L2Q9H2X8 130 aa8.75□□□□□ -1.01
CTC1-202ENST00000449476 SEMA5BQ9P283 1151 aa8.75□□□□□ -1.01
CTC1-202ENST00000449476 COL4A6Q14031 1691 aa8.75□□□□□ -1.01
CTC1-202ENST00000449476 TM4SF5O14894 197 aa8.74□□□□□ -1.01
CTC1-202ENST00000449476 CGAP01215 116 aa8.74□□□□□ -1.01
CTC1-202ENST00000449476 RPLP1P05386 114 aaKnown RBP8.74□□□□□ -1.01
CTC1-202ENST00000449476 HTN1P15515 57 aa8.74□□□□□ -1.01
CTC1-202ENST00000449476 CA7P43166 264 aa8.74□□□□□ -1.01
CTC1-202ENST00000449476 TMEM78Q5T7P6 136 aa8.74□□□□□ -1.01
CTC1-202ENST00000449476 MRPL37Q9BZE1 423 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms