RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 CYCSP99999 105 aaKnown RBP11.65□□□□□ -0.55
TNF-208ENST00000449264 CD300CQ08708 224 aa11.65□□□□□ -0.55
TNF-208ENST00000449264 TNXAQ16473 311 aa11.65□□□□□ -0.55
TNF-208ENST00000449264 PRSS8Q16651 343 aa11.65□□□□□ -0.55
TNF-208ENST00000449264 CXorf66Q5JRM2 361 aaPredicted RBP11.65□□□□□ -0.55
TNF-208ENST00000449264 C10orf55Q5SWW7 151 aa11.65□□□□□ -0.55
TNF-208ENST00000449264 MMD2Q8IY49 270 aa11.65□□□□□ -0.55
TNF-208ENST00000449264 Q8N9W7 124 aa11.65□□□□□ -0.55
TNF-208ENST00000449264 OR2T35Q8NGX2 323 aa11.65□□□□□ -0.55
TNF-208ENST00000449264 PPP1R1CQ8WVI7 109 aa11.65□□□□□ -0.55
TNF-208ENST00000449264 ST6GAL2Q96JF0 529 aa11.65□□□□□ -0.55
TNF-208ENST00000449264 RASL11BQ9BPW5 248 aa11.65□□□□□ -0.55
TNF-208ENST00000449264 HINT2Q9BX68 163 aa11.65□□□□□ -0.55
TNF-208ENST00000449264 MAGT1Q9H0U3 335 aa11.65□□□□□ -0.55
TNF-208ENST00000449264 PRDM13Q9H4Q3 707 aa11.65□□□□□ -0.55
TNF-208ENST00000449264 PRNDQ9UKY0 176 aa11.65□□□□□ -0.55
TNF-208ENST00000449264 LSM5Q9Y4Y9 91 aaKnown RBP11.65□□□□□ -0.55
TNF-208ENST00000449264 OR51B2Q9Y5P1 312 aa11.65□□□□□ -0.55
TNF-208ENST00000449264 FCN1O00602 326 aa11.64□□□□□ -0.55
TNF-208ENST00000449264 PITX3O75364 302 aa11.64□□□□□ -0.55
TNF-208ENST00000449264 IFNA17P01571 189 aa11.64□□□□□ -0.55
TNF-208ENST00000449264 NKX2-1P43699 371 aaPredicted RBP11.64□□□□□ -0.55
TNF-208ENST00000449264 RAP2BP61225 183 aa11.64□□□□□ -0.55
TNF-208ENST00000449264 RAB32Q13637 225 aa11.64□□□□□ -0.55
TNF-208ENST00000449264 MRGPRG-AS1Q2M3A8 158 aa11.64□□□□□ -0.55
TNF-208ENST00000449264 C5orf56Q8N8D9 126 aa11.64□□□□□ -0.55
TNF-208ENST00000449264 COMMD5Q9GZQ3 224 aa11.64□□□□□ -0.55
TNF-208ENST00000449264 TMEM14BQ9NUH8 114 aa11.64□□□□□ -0.55
TNF-208ENST00000449264 FOXA2Q9Y261 457 aaPredicted RBP11.64□□□□□ -0.55
TNF-208ENST00000449264 MBPP02686 304 aaPredicted RBP11.63□□□□□ -0.55
TNF-208ENST00000449264 SRSF4Q08170 494 aaKnown RBP11.63□□□□□ -0.55
TNF-208ENST00000449264 ZNF429Q86V71 674 aa11.63□□□□□ -0.55
TNF-208ENST00000449264 NEURL2Q9BR09 285 aa11.63□□□□□ -0.55
TNF-208ENST00000449264 DNAJC9-AS1A6NH13 148 aa11.62□□□□□ -0.55
TNF-208ENST00000449264 WRBO00258 174 aa11.62□□□□□ -0.55
TNF-208ENST00000449264 FGF16O43320 207 aa11.62□□□□□ -0.55
TNF-208ENST00000449264 SSSCA1O60232 199 aa11.62□□□□□ -0.55
TNF-208ENST00000449264 CNIH1O95406 144 aa11.62□□□□□ -0.55
TNF-208ENST00000449264 POLR2GP62487 172 aaKnown RBP eCLIP11.62□□□□□ -0.55
TNF-208ENST00000449264 TNFRSF9Q07011 255 aa11.62□□□□□ -0.55
TNF-208ENST00000449264 TUSC1Q2TAM9 212 aa11.62□□□□□ -0.55
TNF-208ENST00000449264 ASB13Q8WXK3 278 aa11.62□□□□□ -0.55
TNF-208ENST00000449264 CEBPZOSA8MTT3 80 aa11.62□□□□□ -0.55
TNF-208ENST00000449264 K7EPK0 472 aa11.62□□□□□ -0.55
TNF-208ENST00000449264 IL15RAQ13261 267 aa11.62□□□□□ -0.55
TNF-208ENST00000449264 C9orf152Q5JTZ5 239 aa11.62□□□□□ -0.55
TNF-208ENST00000449264 C16orf82Q7Z2V1 217 aa11.62□□□□□ -0.55
TNF-208ENST00000449264 GRPEL2Q8TAA5 225 aa11.62□□□□□ -0.55
TNF-208ENST00000449264 ZNF418Q8TF45 676 aaPredicted RBP11.62□□□□□ -0.55
TNF-208ENST00000449264 ABHD5Q8WTS1 349 aa11.62□□□□□ -0.55
TNF-208ENST00000449264 RBKSQ9H477 322 aa11.62□□□□□ -0.55
TNF-208ENST00000449264 FKBP11Q9NYL4 201 aa11.62□□□□□ -0.55
TNF-208ENST00000449264 HSPB7Q9UBY9 170 aa11.62□□□□□ -0.55
TNF-208ENST00000449264 RCL1Q9Y2P8 373 aaKnown RBP11.62□□□□□ -0.55
TNF-208ENST00000449264 POMT1Q9Y6A1 747 aa11.62□□□□□ -0.55
TNF-208ENST00000449264 TEX50A0A1B0GTY4 177 aa11.61□□□□□ -0.55
TNF-208ENST00000449264 FAM90A26D6RGX4 464 aa11.61□□□□□ -0.55
TNF-208ENST00000449264 M0QZK8 103 aa11.61□□□□□ -0.55
TNF-208ENST00000449264 MPC2O95563 127 aa11.61□□□□□ -0.55
TNF-208ENST00000449264 HLA-DRB1P01911 266 aa11.61□□□□□ -0.55
TNF-208ENST00000449264 FGF2P09038 288 aa11.61□□□□□ -0.55
TNF-208ENST00000449264 IAPPP10997 89 aa11.61□□□□□ -0.55
TNF-208ENST00000449264 PSMB6P28072 239 aa11.61□□□□□ -0.55
TNF-208ENST00000449264 MAS1LP35410 378 aa11.61□□□□□ -0.55
TNF-208ENST00000449264 RPL27AP46776 148 aaKnown RBP11.61□□□□□ -0.55
TNF-208ENST00000449264 HOXA1P49639 335 aaPredicted RBP11.61□□□□□ -0.55
TNF-208ENST00000449264 COMPP49747 757 aaPredicted RBP11.61□□□□□ -0.55
TNF-208ENST00000449264 HSPE1P61604 102 aaKnown RBP11.61□□□□□ -0.55
TNF-208ENST00000449264 SSBP2P81877 361 aaPredicted RBP11.61□□□□□ -0.55
TNF-208ENST00000449264 ID3Q02535 119 aa11.61□□□□□ -0.55
TNF-208ENST00000449264 AARDQ4LEZ3 155 aa11.61□□□□□ -0.55
TNF-208ENST00000449264 Q5BKY6 102 aa11.61□□□□□ -0.55
TNF-208ENST00000449264 C11orf87Q6NUJ2 197 aa11.61□□□□□ -0.55
TNF-208ENST00000449264 OR5B3Q8NH48 314 aa11.61□□□□□ -0.55
TNF-208ENST00000449264 HSPB9Q9BQS6 159 aa11.61□□□□□ -0.55
TNF-208ENST00000449264 ESM1Q9NQ30 184 aa11.61□□□□□ -0.55
TNF-208ENST00000449264 TRAV14DV4A0A0A6YYC5 116 aa11.6□□□□□ -0.55
TNF-208ENST00000449264 E7EUB6 86 aa11.6□□□□□ -0.55
TNF-208ENST00000449264 AMY1AP04745 511 aa11.6□□□□□ -0.55
TNF-208ENST00000449264 FAM157CP0CG43 387 aa11.6□□□□□ -0.55
TNF-208ENST00000449264 APELAP0DMC3 54 aa11.6□□□□□ -0.55
TNF-208ENST00000449264 SPCS3P61009 180 aa11.6□□□□□ -0.55
TNF-208ENST00000449264 NDPQ00604 133 aa11.6□□□□□ -0.55
TNF-208ENST00000449264 FXYD3Q14802 87 aa11.6□□□□□ -0.55
TNF-208ENST00000449264 TCTE3Q8IZS6 198 aa11.6□□□□□ -0.55
TNF-208ENST00000449264 TMEM86BQ8N661 226 aa11.6□□□□□ -0.55
TNF-208ENST00000449264 OR1L8Q8NGR8 309 aa11.6□□□□□ -0.55
TNF-208ENST00000449264 SRSF12Q8WXF0 261 aaKnown RBP11.6□□□□□ -0.55
TNF-208ENST00000449264 ARPC1AQ92747 370 aa11.6□□□□□ -0.55
TNF-208ENST00000449264 FAM103A1Q9BTL3 118 aaKnown RBP11.6□□□□□ -0.55
TNF-208ENST00000449264 PLEKHA3Q9HB20 300 aa11.6□□□□□ -0.55
TNF-208ENST00000449264 ZNF257Q9Y2Q1 563 aa11.6□□□□□ -0.55
TNF-208ENST00000449264 IGHV7-81A0A0B4J1V7 117 aa11.59□□□□□ -0.55
TNF-208ENST00000449264 G3V3Q6 166 aa11.59□□□□□ -0.55
TNF-208ENST00000449264 SYNGR2O43760 224 aa11.59□□□□□ -0.55
TNF-208ENST00000449264 CRLF1O75462 422 aa11.59□□□□□ -0.55
TNF-208ENST00000449264 PET100P0DJ07 73 aa11.59□□□□□ -0.55
TNF-208ENST00000449264 CX3CL1P78423 397 aa11.59□□□□□ -0.55
TNF-208ENST00000449264 PRCDQ00LT1 54 aa11.59□□□□□ -0.55
TNF-208ENST00000449264 OR10W1Q8NGF6 305 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms