RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 TBC1D29Q9UFV1 150 aa7.7□□□□□ -1.18
NIPBL-202ENST00000448238 UPK2O00526 184 aa7.7□□□□□ -1.18
NIPBL-202ENST00000448238 FAM78AQ5JUQ0 283 aa7.7□□□□□ -1.18
NIPBL-202ENST00000448238 SNAI1O95863 264 aaPredicted RBP7.7□□□□□ -1.18
NIPBL-202ENST00000448238 IGHG3P01860 377 aa7.7□□□□□ -1.18
NIPBL-202ENST00000448238 DANCRP0C864 163 aa7.7□□□□□ -1.18
NIPBL-202ENST00000448238 DMRTC1Q5HYR2 192 aa7.7□□□□□ -1.18
NIPBL-202ENST00000448238 DIP2BQ9P265 1576 aa7.7□□□□□ -1.18
NIPBL-202ENST00000448238 IGKV3D-20A0A0C4DH25 116 aa7.7□□□□□ -1.18
NIPBL-202ENST00000448238 KLK2P20151 261 aa7.7□□□□□ -1.18
NIPBL-202ENST00000448238 TPTE2P1Q5T6R2 138 aa7.7□□□□□ -1.18
NIPBL-202ENST00000448238 ANK1P16157 1881 aa7.7□□□□□ -1.18
NIPBL-202ENST00000448238 UBE2E2Q96LR5 201 aa7.7□□□□□ -1.18
NIPBL-202ENST00000448238 HILPDAQ9Y5L2 63 aa7.7□□□□□ -1.18
NIPBL-202ENST00000448238 GAGE12BA1L429 117 aa7.7□□□□□ -1.18
NIPBL-202ENST00000448238 LMO7DNF2Z398 122 aa7.7□□□□□ -1.18
NIPBL-202ENST00000448238 CDC42EP2O14613 210 aa7.7□□□□□ -1.18
NIPBL-202ENST00000448238 PSCAO43653 123 aa7.7□□□□□ -1.18
NIPBL-202ENST00000448238 MMP23AO75900 390 aa7.7□□□□□ -1.18
NIPBL-202ENST00000448238 HIKESHIQ53FT3 197 aa7.7□□□□□ -1.18
NIPBL-202ENST00000448238 HIVEP3Q5T1R4 2406 aa7.7□□□□□ -1.18
NIPBL-202ENST00000448238 HIGD1CA8MV81 97 aa7.7□□□□□ -1.18
NIPBL-202ENST00000448238 FOXA3P55318 350 aaPredicted RBP7.7□□□□□ -1.18
NIPBL-202ENST00000448238 C2orf68Q2NKX9 166 aa7.7□□□□□ -1.18
NIPBL-202ENST00000448238 TMEM252Q8N6L7 170 aa7.7□□□□□ -1.18
NIPBL-202ENST00000448238 LRRC61Q9BV99 259 aa7.7□□□□□ -1.18
NIPBL-202ENST00000448238 PEMTQ9UBM1 199 aa7.7□□□□□ -1.18
NIPBL-202ENST00000448238 IZUMO1RA6ND01 250 aa7.69□□□□□ -1.18
NIPBL-202ENST00000448238 RND2P52198 227 aa7.69□□□□□ -1.18
NIPBL-202ENST00000448238 C1QTNF12Q5T7M4 302 aa7.69□□□□□ -1.18
NIPBL-202ENST00000448238 OR11H7Q8NGC8 314 aa7.69□□□□□ -1.18
NIPBL-202ENST00000448238 PRADC1Q9BSG0 188 aa7.69□□□□□ -1.18
NIPBL-202ENST00000448238 NBEAP1P0C6P0 100 aa7.69□□□□□ -1.18
NIPBL-202ENST00000448238 LINC00305Q7Z4B0 112 aa7.69□□□□□ -1.18
NIPBL-202ENST00000448238 A0A1W2PPI3 338 aa7.69□□□□□ -1.18
NIPBL-202ENST00000448238 NPIPB11E5RHQ5 1161 aa7.69□□□□□ -1.18
NIPBL-202ENST00000448238 FCN3O75636 299 aa7.69□□□□□ -1.18
NIPBL-202ENST00000448238 KIF13BQ9NQT8 1826 aa7.69□□□□□ -1.18
NIPBL-202ENST00000448238 SOCS1O15524 211 aa7.69□□□□□ -1.18
NIPBL-202ENST00000448238 LILRA1O75019 489 aa7.69□□□□□ -1.18
NIPBL-202ENST00000448238 SELLP14151 372 aa7.69□□□□□ -1.18
NIPBL-202ENST00000448238 FOXB2Q5VYV0 432 aa7.69□□□□□ -1.18
NIPBL-202ENST00000448238 MIC13Q5XKP0 118 aa7.69□□□□□ -1.18
NIPBL-202ENST00000448238 PTCRAQ6ISU1 281 aaPredicted RBP7.69□□□□□ -1.18
NIPBL-202ENST00000448238 HCP5Q6MZN7 132 aa7.69□□□□□ -1.18
NIPBL-202ENST00000448238 IFI27L2Q9H2X8 130 aa7.69□□□□□ -1.18
NIPBL-202ENST00000448238 CMC4P56277 68 aaPredicted RBP7.69□□□□□ -1.18
NIPBL-202ENST00000448238 JMJD8Q96S16 334 aa7.69□□□□□ -1.18
NIPBL-202ENST00000448238 CD69Q07108 199 aa7.69□□□□□ -1.18
NIPBL-202ENST00000448238 IRF3Q14653 427 aa7.69□□□□□ -1.18
NIPBL-202ENST00000448238 GDF15Q99988 308 aa7.69□□□□□ -1.18
NIPBL-202ENST00000448238 MARCH11A6NNE9 402 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 H0YL77 283 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 C16orf97H3BN30 126 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 LHX2P50458 406 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 IMMP2LQ96T52 175 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 NRN1Q9NPD7 142 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 TRGV4A0A0C4DH28 118 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 FABP5P3A8MUU1 101 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 RND3P61587 244 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 ATP5L2Q7Z4Y8 100 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 ITLN2Q8WWU7 325 aaPredicted RBP7.68□□□□□ -1.18
NIPBL-202ENST00000448238 RASL10AQ92737 203 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 TMEM186Q96B77 213 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 SMIM8Q96KF7 97 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 ZNF252P-AS1Q0IIN9 211 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 GTSCR1Q86UQ5 136 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 TMEM54Q969K7 222 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 THAP10Q9P2Z0 257 aaPredicted RBP7.68□□□□□ -1.18
NIPBL-202ENST00000448238 TUBGCP6Q96RT7 1819 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 MBD5Q9P267 1494 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 HAX1O00165 279 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 NMBP08949 121 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 UBE2DNLQ8IWF7 75 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 PEAK1Q9H792 1746 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 UBR2Q8IWV8 1755 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 A0A0U1RQV5 110 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 hADV29S1A0JD25 119 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 TCRAP04437 139 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 LAGE3Q14657 143 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 ICAM4Q14773 271 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 ST6GALNAC6Q969X2 333 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 SPANXB1Q9NS25 103 aaPredicted RBP7.68□□□□□ -1.18
NIPBL-202ENST00000448238 MRC1P22897 1456 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 TCRBV5S2A0A599 114 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 C1orf162Q8NEQ5 155 aaPredicted RBP7.68□□□□□ -1.18
NIPBL-202ENST00000448238 SLC25A37Q9NYZ2 338 aa7.68□□□□□ -1.18
NIPBL-202ENST00000448238 SLC50A1Q9BRV3 221 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 TLNRD1Q9H1K6 362 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 SPATA31D1Q6ZQQ2 1576 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 REG1BP48304 166 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 ACER2Q5QJU3 275 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 STHQ8IWL8 128 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 FAM90A10PA6NDY2 464 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 FAM90A18PA6NE21 464 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 FAM90A16PA6NEW6 464 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 FAM90A20PA6NIJ5 464 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 FAM90A8PA6NJQ4 464 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 FAM90A7PA6NKC0 464 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 FAM90A22PA8MWA6 464 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms