RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 PRDX2P32119 198 aa7.91□□□□□ -1.14
SMC6-207ENST00000448223 RPS20P60866 119 aaKnown RBP7.91□□□□□ -1.14
SMC6-207ENST00000448223 TMEM144Q7Z5S9 345 aa7.91□□□□□ -1.14
SMC6-207ENST00000448223 ZADH2Q8N4Q0 377 aa7.91□□□□□ -1.14
SMC6-207ENST00000448223 PLPPR1Q8TBJ4 325 aa7.91□□□□□ -1.14
SMC6-207ENST00000448223 FOXB1Q99853 325 aa7.91□□□□□ -1.14
SMC6-207ENST00000448223 MESP1Q9BRJ9 268 aa7.91□□□□□ -1.14
SMC6-207ENST00000448223 REG4Q9BYZ8 158 aa7.91□□□□□ -1.14
SMC6-207ENST00000448223 CLEC1BQ9P126 229 aa7.91□□□□□ -1.14
SMC6-207ENST00000448223 YBX2Q9Y2T7 364 aaKnown RBP7.91□□□□□ -1.14
SMC6-207ENST00000448223 RIF1Q5UIP0 2472 aaKnown RBP7.91□□□□□ -1.14
SMC6-207ENST00000448223 IGHV3-15A0A0B4J1V0 119 aa7.9□□□□□ -1.14
SMC6-207ENST00000448223 A0A1W2PPC1 479 aa7.9□□□□□ -1.14
SMC6-207ENST00000448223 J3KRW8 73 aa7.9□□□□□ -1.14
SMC6-207ENST00000448223 SCRG1O75711 98 aa7.9□□□□□ -1.14
SMC6-207ENST00000448223 KIR3DL2P43630 455 aa7.9□□□□□ -1.14
SMC6-207ENST00000448223 RPL31P62899 125 aaKnown RBP7.9□□□□□ -1.14
SMC6-207ENST00000448223 FOXQ1Q9C009 403 aa7.9□□□□□ -1.14
SMC6-207ENST00000448223 DENND4CQ5VZ89 1909 aa7.9□□□□□ -1.14
SMC6-207ENST00000448223 HYPMO75409 117 aa7.9□□□□□ -1.14
SMC6-207ENST00000448223 SELLP14151 372 aa7.9□□□□□ -1.14
SMC6-207ENST00000448223 UCP2P55851 309 aa7.9□□□□□ -1.14
SMC6-207ENST00000448223 KRTCAP3Q53RY4 240 aa7.9□□□□□ -1.14
SMC6-207ENST00000448223 SLC23A3Q6PIS1 610 aa7.9□□□□□ -1.14
SMC6-207ENST00000448223 GFI1Q99684 422 aa7.9□□□□□ -1.14
SMC6-207ENST00000448223 KLF12Q9Y4X4 402 aa7.9□□□□□ -1.14
SMC6-207ENST00000448223 FOXS1O43638 330 aa7.9□□□□□ -1.14
SMC6-207ENST00000448223 HSPE1P61604 102 aaKnown RBP7.9□□□□□ -1.14
SMC6-207ENST00000448223 FOXF1Q12946 379 aa7.9□□□□□ -1.14
SMC6-207ENST00000448223 GAGE5Q13069 117 aa7.9□□□□□ -1.14
SMC6-207ENST00000448223 GAGE6Q13070 117 aa7.9□□□□□ -1.14
SMC6-207ENST00000448223 OR10J3Q5JRS4 329 aa7.9□□□□□ -1.14
SMC6-207ENST00000448223 C10orf35Q96D05 121 aa7.9□□□□□ -1.14
SMC6-207ENST00000448223 LRRC61Q9BV99 259 aa7.9□□□□□ -1.14
SMC6-207ENST00000448223 NPFFR1Q9GZQ6 430 aa7.9□□□□□ -1.14
SMC6-207ENST00000448223 TMEM242Q9NWH2 141 aa7.9□□□□□ -1.14
SMC6-207ENST00000448223 GAGE12JA6NER3 117 aa7.9□□□□□ -1.15
SMC6-207ENST00000448223 GAGE7O76087 117 aa7.9□□□□□ -1.15
SMC6-207ENST00000448223 GAGE12FP0CL80 117 aa7.9□□□□□ -1.15
SMC6-207ENST00000448223 GAGE12GP0CL81 117 aa7.9□□□□□ -1.15
SMC6-207ENST00000448223 GAGE12IP0CL82 117 aa7.9□□□□□ -1.15
SMC6-207ENST00000448223 AZU1P20160 251 aa7.9□□□□□ -1.15
SMC6-207ENST00000448223 SUMO3P55854 103 aaPredicted RBP7.9□□□□□ -1.15
SMC6-207ENST00000448223 SOX8P57073 446 aa7.9□□□□□ -1.15
SMC6-207ENST00000448223 GAGE4Q13068 117 aa7.9□□□□□ -1.15
SMC6-207ENST00000448223 WFDC8Q8IUA0 241 aa7.9□□□□□ -1.15
SMC6-207ENST00000448223 NAT6Q93015 286 aa7.9□□□□□ -1.15
SMC6-207ENST00000448223 A0A1W2PQM1 296 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 NPIPB6E9PJ23 425 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 UPK3AO75631 287 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 DRD1P21728 446 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 TNFRSF4P43489 277 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 MRPS11P82912 194 aaKnown RBP7.89□□□□□ -1.15
SMC6-207ENST00000448223 PSG3Q16557 428 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 SPATA46Q5T0L3 261 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 LINC01590Q5TEZ4 76 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 SLC25A28Q96A46 364 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 ALKBH3Q96Q83 286 aaPredicted RBP7.89□□□□□ -1.15
SMC6-207ENST00000448223 HIGD1AQ9Y241 93 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 KIAA1671Q9BY89 1806 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 TRAV2A0A0B4J234 112 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 TRAV12-3A0A0B4J271 114 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 LOC101059948A0A1B0GTJ6 334 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 FRG2CA6NGY1 282 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 CXCL13O43927 109 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 UCP1P25874 307 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 CD38P28907 300 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 BMPERQ8N8U9 685 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 CDCA3Q99618 268 aaPredicted RBP7.89□□□□□ -1.15
SMC6-207ENST00000448223 TRAV14DV4A0A0A6YYC5 116 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 MUC21A0A0G2JKD1 596 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 MUC21A0A140T8X8 626 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 B5MCH6 92 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 LYPD3O95274 346 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 PPP1R17O96001 155 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 SSTR5P35346 364 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 MNX1P50219 401 aaPredicted RBP7.89□□□□□ -1.15
SMC6-207ENST00000448223 ZNF415Q09FC8 603 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 MUC21Q5SSG8 566 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 FHL5Q5TD97 284 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 AGBL5Q8NDL9 886 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 DLX4Q92988 240 aaPredicted RBP7.89□□□□□ -1.15
SMC6-207ENST00000448223 IGKV1D-42A0A075B6H8 117 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 TRAV21A0A0B4J279 112 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 A0A0U1RQV5 110 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 CD5P06127 495 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 GPR6P46095 362 aaPredicted RBP7.89□□□□□ -1.15
SMC6-207ENST00000448223 DLX6P56179 175 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 YPEL5P62699 121 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 PAPPA-AS1Q5QFB9 102 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 ATG4DQ86TL0 474 aaPredicted RBP7.89□□□□□ -1.15
SMC6-207ENST00000448223 SLC22A18ASQ8N1D0 253 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 MRAPQ8TCY5 172 aa7.89□□□□□ -1.15
SMC6-207ENST00000448223 C8orf88P0DMB2 117 aa7.88□□□□□ -1.15
SMC6-207ENST00000448223 ERVK11-1P61568 191 aa7.88□□□□□ -1.15
SMC6-207ENST00000448223 ICAM4Q14773 271 aa7.88□□□□□ -1.15
SMC6-207ENST00000448223 TNXAQ16473 311 aa7.88□□□□□ -1.15
SMC6-207ENST00000448223 TMEM101Q96IK0 257 aa7.88□□□□□ -1.15
SMC6-207ENST00000448223 SEPSECSQ9HD40 501 aaKnown RBP7.88□□□□□ -1.15
SMC6-207ENST00000448223 YAE1D1Q9NRH1 226 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms