RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 RNASE8Q8TDE3 154 aaKnown RBP6.7□□□□□ -1.34
SMG1-202ENST00000446231 HIGD1CA8MV81 97 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 GABRG2P18507 467 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 TEX29Q8N6K0 151 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 SNRNP40Q96DI7 357 aaKnown RBP6.7□□□□□ -1.34
SMG1-202ENST00000446231 SIGLEC12Q96PQ1 595 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 MRPL13Q9BYD1 178 aaKnown RBP6.7□□□□□ -1.34
SMG1-202ENST00000446231 TMEM189A5PLL7 270 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 NPIPB13A6NJU9 1138 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 NPIPB4C9JG80 1138 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 ATP5G3P48201 142 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 LHFPL1Q86WI0 220 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 FAM169BQ8N8A8 192 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 C19orf24Q9BVV8 132 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 ABCA3Q99758 1704 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 A0A0G2JMM0 328 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 A0A1W2PPB8 328 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 KIR3DP1A8MWS1 328 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 HGFACQ04756 655 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 Q0VG73 95 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 LRRC61Q9BV99 259 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 TMSB15BA0A087X1C1 80 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 CKS2P33552 79 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 ATP5IP56385 69 aaPredicted RBP6.7□□□□□ -1.34
SMG1-202ENST00000446231 KRTCAP3Q53RY4 240 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 HIGD1AQ9Y241 93 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 IGKV1-9A0A0C4DH69 117 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 PGPEP1LA6NFU8 196 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 DLL1O00548 723 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 VSTM2AQ8TAG5 236 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 MUC21A0A0G2JKD1 596 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 MUC21A0A140T8X8 626 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 ZNF785A8K8V0 405 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 CD40P25942 277 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 MUC21Q5SSG8 566 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 RTN4RL2Q86UN3 420 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 SMIM17P0DL12 118 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 C8orf88P0DMB2 117 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 KIR3DS1Q14943 382 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 RBPMS2Q6ZRY4 209 aaKnown RBP6.69□□□□□ -1.34
SMG1-202ENST00000446231 TYMSP04818 313 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 FOXA3P55318 350 aaPredicted RBP6.69□□□□□ -1.34
SMG1-202ENST00000446231 TBR1Q16650 682 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 LINC00696Q6ZRV3 163 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 MRPL16Q9NX20 251 aaKnown RBP6.69□□□□□ -1.34
SMG1-202ENST00000446231 FBXL7Q9UJT9 491 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 OR2T8A6NH00 312 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 CDIPTO14735 213 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 TIMP3P35625 211 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 RPS20P60866 119 aaKnown RBP6.69□□□□□ -1.34
SMG1-202ENST00000446231 ZNF718Q3SXZ3 478 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 PLA2G2EQ9NZK7 142 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 NAA38Q9BRA0 125 aaKnown RBP6.69□□□□□ -1.34
SMG1-202ENST00000446231 SSBP4Q9BWG4 385 aaPredicted RBP6.69□□□□□ -1.34
SMG1-202ENST00000446231 DECR2Q9NUI1 292 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 LGALS4P56470 323 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 OSTCQ9NRP0 149 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 TRPM3Q9HCF6 1732 aaPredicted RBP6.69□□□□□ -1.34
SMG1-202ENST00000446231 ADAMTSL5Q6ZMM2 481 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 ZNF83P51522 516 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 hDV102S1A0JD36 115 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 RRHO14718 337 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 GZMHP20718 246 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 HSD52Q0P140 79 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 TWIST1Q15672 202 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 CHCHD1Q96BP2 118 aaKnown RBP6.69□□□□□ -1.34
SMG1-202ENST00000446231 MYF5P13349 255 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 TPRX1Q8N7U7 411 aa6.69□□□□□ -1.34
SMG1-202ENST00000446231 PSG9Q00887 426 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 PCSK4Q6UW60 755 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 JMJD1CQ15652 2540 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 PAX2Q02962 417 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 MPV17L2Q567V2 206 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 GCSAMLQ5JQS6 135 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 TIMM23BQ5SRD1 257 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 OR2Z1Q8NG97 314 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 RPL8P62917 257 aaKnown RBP6.68□□□□□ -1.34
SMG1-202ENST00000446231 NYNRINQ9P2P1 1898 aaKnown RBP6.68□□□□□ -1.34
SMG1-202ENST00000446231 A0A1W2PS18 150 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 CEACAM18A8MTB9 384 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 KIR2DL1P43626 348 aaPredicted RBP6.68□□□□□ -1.34
SMG1-202ENST00000446231 KIR2DL2P43627 348 aaPredicted RBP6.68□□□□□ -1.34
SMG1-202ENST00000446231 PDLIM4P50479 330 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 CLDN18P56856 261 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 LRRC29Q8WV35 223 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 CXXC4Q9H2H0 198 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 SYNGR1O43759 233 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 NAV2Q8IVL1 2488 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 KIR2DL5BA0A0G2JN68 375 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 KIR2DL5BA0A0G2JPC4 375 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 TMEM238C9JI98 176 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 GAGE13Q4V321 117 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 KIR2DL5AQ8N109 375 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 HOXA4Q00056 320 aaPredicted RBP6.68□□□□□ -1.34
SMG1-202ENST00000446231 RNASE7Q9H1E1 156 aaKnown RBP6.68□□□□□ -1.34
SMG1-202ENST00000446231 ARTNQ5T4W7 220 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 TSKUQ8WUA8 353 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 H7C2G1 150 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 LYZL4Q96KX0 146 aa6.68□□□□□ -1.34
SMG1-202ENST00000446231 K7EP34 96 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms