RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 RTL8CO15255 209 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 OR2B3O76000 313 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 FSTL3O95633 263 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 MT-CO2P00403 227 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 IGKV1D-12P01611 117 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 OPN1SWP03999 348 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 GYPCP04921 128 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 CD5P06127 495 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 GUSBP08236 651 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 OR4E1P0C645 316 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 CCL1P22362 96 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 OR10J1P30954 320 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 CA7P43166 264 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 DAPP51397 102 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 TMEM33P57088 247 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 PSME3P61289 254 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 HIST1H3AP68431 136 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 H3F3AP84243 136 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 ZNF616Q08AN1 781 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 LCE3AQ5TA76 89 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 DHRS4L2Q6PKH6 230 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 ZNF695Q8IW36 515 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 Q8N9L7 120 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 LY6G5BQ8NDX9 201 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 OR2T27Q8NH04 317 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 RTN4IP1Q8WWV3 396 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 MS4A6EQ96DS6 147 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 BTF3L4Q96K17 158 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 PPP1R2P1Q96PQ5 205 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 TRIM4Q9C037 500 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 GABARAPL1Q9H0R8 117 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 OR2D2Q9H210 308 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 DOK5Q9P104 306 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 PKIGQ9Y2B9 76 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 MRPS16Q9Y3D3 137 aaKnown RBP2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 PXMP4Q9Y6I8 212 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 NAV1Q8NEY1 1877 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 AFDNP55196 1824 aaKnown RBP2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 FRYLO94915 3013 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 DMXL1Q9Y485 3027 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 EDC4Q6P2E9 1401 aaKnown RBP2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 GVINP1Q7Z2Y8 2422 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 ZZEF1O43149 2961 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 VPS13AQ96RL7 3174 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 PQLC2LA1A4F0 135 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 ZNF878C9JN71 531 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 BHLHE40O14503 412 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 TRGV3P03979 118 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 ESDP10768 282 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 MUC1P15941 1255 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 PPP1CCP36873 323 aaKnown RBP2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 POLR2GP62487 172 aaKnown RBP eCLIP2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 BSPH1Q075Z2 132 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 FUT5Q11128 374 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 KRR1Q13601 381 aaKnown RBP2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 CDK10Q15131 360 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 LIN52Q52LA3 116 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 LINC00483Q53H64 154 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 FAM71E1Q6IPT2 247 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 KRTAP5-4Q6L8H1 288 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 TBPL2Q6SJ96 375 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 GLT6D1Q7Z4J2 308 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 TMED4Q7Z7H5 227 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 LRP11Q86VZ4 500 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 SGPP2Q8IWX5 399 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 C1orf174Q8IYL3 243 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 ST20-AS1Q8NBB2 130 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 OR11G2Q8NGC1 345 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 OR2T4Q8NH00 348 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 OR4X1Q8NH49 305 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 NEK7Q8TDX7 302 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 C1orf50Q9BV19 199 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 NMNAT1Q9HAN9 279 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 GID8Q9NWU2 228 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 DHCR7Q9UBM7 475 aaKnown RBP2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 CARHSP1Q9Y2V2 147 aaKnown RBP2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 PHLDA3Q9Y5J5 127 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 OR51B4Q9Y5P0 310 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 ITGB4P16144 1822 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 KIF24Q5T7B8 1368 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 ZNF831Q5JPB2 1677 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 FAM208BQ5VWN6 2430 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 USP24Q9UPU5 2620 aa2.69□□□□□ -1.98
HMGB1P48-201ENST00000446155 ZNF532Q9HCE3 1301 aa2.68□□□□□ -1.98
HMGB1P48-201ENST00000446155 MON2Q7Z3U7 1717 aa2.68□□□□□ -1.98
HMGB1P48-201ENST00000446155 IGLV3-16A0A075B6K0 115 aa2.68□□□□□ -1.98
HMGB1P48-201ENST00000446155 C7orf66A4D0T2 115 aa2.68□□□□□ -1.98
HMGB1P48-201ENST00000446155 LINC00862A6NCI5 91 aa2.68□□□□□ -1.98
HMGB1P48-201ENST00000446155 GOLGA6L4A6NEF3 574 aa2.68□□□□□ -1.98
HMGB1P48-201ENST00000446155 OR6C6A6NF89 314 aa2.68□□□□□ -1.98
HMGB1P48-201ENST00000446155 ZNF729A6NN14 1252 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P48-201ENST00000446155 A8MWP4 228 aa2.68□□□□□ -1.98
HMGB1P48-201ENST00000446155 INMT-MINDY4F8WBC2 141 aa2.68□□□□□ -1.98
HMGB1P48-201ENST00000446155 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P48-201ENST00000446155 C15orf65H3BRN8 121 aa2.68□□□□□ -1.98
HMGB1P48-201ENST00000446155 GSTZ1O43708 216 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P48-201ENST00000446155 APOMO95445 188 aa2.68□□□□□ -1.98
HMGB1P48-201ENST00000446155 TTRP02766 147 aa2.68□□□□□ -1.98
HMGB1P48-201ENST00000446155 HLA-DQB2P05538 268 aa2.68□□□□□ -1.98
HMGB1P48-201ENST00000446155 FGF6P10767 208 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms