RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 TBPP20226 339 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 GNRHRP30968 328 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 MAS1LP35410 378 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 DCTN2Q13561 401 aaKnown RBP8.28□□□□□ -1.08
SF3A1-203ENST00000444440 EXOSC2Q13868 293 aaKnown RBP8.28□□□□□ -1.08
SF3A1-203ENST00000444440 AADACL3Q5VUY0 350 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 Q8N1Y9 231 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 OR9G4Q8NGQ1 327 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 OR6Q1Q8NGQ2 317 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 OR52I2Q8NH67 350 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 WWC2-AS2Q96NR7 200 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 FANCD2OSQ96PS1 177 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 OR4C12Q96R67 309 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 SPIN2AQ99865 258 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 SPIN2BQ9BPZ2 258 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 RSRP1Q9BUV0 290 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 MTFP1Q9UDX5 166 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 SMAD5-AS1Q9Y6J3 95 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 S4R3C0 116 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 U3KQK5 164 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 STAB2Q8WWQ8 2551 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 RYR2Q92736 4967 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 PPP5D1E7EU14 171 aa8.27□□□□□ -1.09
SF3A1-203ENST00000444440 GABARAPH6UMI1 98 aa8.27□□□□□ -1.09
SF3A1-203ENST00000444440 PGLYRP1O75594 196 aaPredicted RBP8.27□□□□□ -1.09
SF3A1-203ENST00000444440 S1PR2O95136 353 aa8.27□□□□□ -1.09
SF3A1-203ENST00000444440 IGHV3-23P01764 117 aa8.27□□□□□ -1.09
SF3A1-203ENST00000444440 HLA-AP01891 365 aaKnown RBP8.27□□□□□ -1.09
SF3A1-203ENST00000444440 REG1AP05451 166 aa8.27□□□□□ -1.09
SF3A1-203ENST00000444440 FRMD6-AS1P0C7T7 363 aa8.27□□□□□ -1.09
SF3A1-203ENST00000444440 NQO2P16083 231 aa8.27□□□□□ -1.09
SF3A1-203ENST00000444440 ZP3P21754 424 aa8.27□□□□□ -1.09
SF3A1-203ENST00000444440 RPL27AP46776 148 aaKnown RBP8.27□□□□□ -1.09
SF3A1-203ENST00000444440 TAS2R31P59538 309 aa8.27□□□□□ -1.09
SF3A1-203ENST00000444440 SSBP1Q04837 148 aaKnown RBP8.27□□□□□ -1.09
SF3A1-203ENST00000444440 RNASE12Q5GAN4 147 aaKnown RBP8.27□□□□□ -1.09
SF3A1-203ENST00000444440 RNASE10Q5GAN6 216 aaKnown RBP8.27□□□□□ -1.09
SF3A1-203ENST00000444440 OR4A47Q6IF82 309 aa8.27□□□□□ -1.09
SF3A1-203ENST00000444440 SLC25A42Q86VD7 318 aa8.27□□□□□ -1.09
SF3A1-203ENST00000444440 OR51H1Q8NH63 302 aa8.27□□□□□ -1.09
SF3A1-203ENST00000444440 OR4A5Q8NH83 315 aa8.27□□□□□ -1.09
SF3A1-203ENST00000444440 USMG5Q96IX5 58 aa8.27□□□□□ -1.09
SF3A1-203ENST00000444440 FYTTD1Q96QD9 318 aaKnown RBP8.27□□□□□ -1.09
SF3A1-203ENST00000444440 ABHD1Q96SE0 405 aa8.27□□□□□ -1.09
SF3A1-203ENST00000444440 THAP7Q9BT49 309 aaPredicted RBP8.27□□□□□ -1.09
SF3A1-203ENST00000444440 C6orf62Q9GZU0 229 aaPredicted RBP8.27□□□□□ -1.09
SF3A1-203ENST00000444440 MIXL1Q9H2W2 232 aa8.27□□□□□ -1.09
SF3A1-203ENST00000444440 PLEKHA2Q9HB19 425 aa8.27□□□□□ -1.09
SF3A1-203ENST00000444440 KLK11Q9UBX7 282 aa8.27□□□□□ -1.09
SF3A1-203ENST00000444440 CEPT1Q9Y6K0 416 aa8.27□□□□□ -1.09
SF3A1-203ENST00000444440 LYSTQ99698 3801 aa8.27□□□□□ -1.09
SF3A1-203ENST00000444440 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.26□□□□□ -1.09
SF3A1-203ENST00000444440 FAM223BA6NKX1 122 aa8.26□□□□□ -1.09
SF3A1-203ENST00000444440 NPIPB5A8MRT5 1133 aa8.26□□□□□ -1.09
SF3A1-203ENST00000444440 NDUFB8O95169 186 aa8.26□□□□□ -1.09
SF3A1-203ENST00000444440 NHLRC4P0CG21 123 aaPredicted RBP8.26□□□□□ -1.09
SF3A1-203ENST00000444440 RPA2P15927 270 aa8.26□□□□□ -1.09
SF3A1-203ENST00000444440 F2RP25116 425 aa8.26□□□□□ -1.09
SF3A1-203ENST00000444440 UCP3P55916 312 aa8.26□□□□□ -1.09
SF3A1-203ENST00000444440 TAS2R19P59542 299 aa8.26□□□□□ -1.09
SF3A1-203ENST00000444440 ERVK-16P61578 105 aa8.26□□□□□ -1.09
SF3A1-203ENST00000444440 IL18Q14116 193 aa8.26□□□□□ -1.09
SF3A1-203ENST00000444440 RPEL1Q2QD12 228 aa8.26□□□□□ -1.09
SF3A1-203ENST00000444440 C15orf32Q32M92 178 aa8.26□□□□□ -1.09
SF3A1-203ENST00000444440 FAM223AQ8IWN6 122 aa8.26□□□□□ -1.09
SF3A1-203ENST00000444440 LAX1Q8IWV1 398 aa8.26□□□□□ -1.09
SF3A1-203ENST00000444440 SLC38A6Q8IZM9 456 aa8.26□□□□□ -1.09
SF3A1-203ENST00000444440 ARRDC1Q8N5I2 433 aa8.26□□□□□ -1.09
SF3A1-203ENST00000444440 TMEM229BQ8NBD8 167 aa8.26□□□□□ -1.09
SF3A1-203ENST00000444440 DMBX1Q8NFW5 382 aa8.26□□□□□ -1.09
SF3A1-203ENST00000444440 MCFD2Q8NI22 146 aa8.26□□□□□ -1.09
SF3A1-203ENST00000444440 DGCR14Q96DF8 476 aaKnown RBP8.26□□□□□ -1.09
SF3A1-203ENST00000444440 CCDC140Q96MF4 163 aa8.26□□□□□ -1.09
SF3A1-203ENST00000444440 HRASLSQ9HDD0 168 aa8.26□□□□□ -1.09
SF3A1-203ENST00000444440 SLC2A9Q9NRM0 540 aa8.26□□□□□ -1.09
SF3A1-203ENST00000444440 BET1LQ9NYM9 111 aa8.26□□□□□ -1.09
SF3A1-203ENST00000444440 RSL24D1Q9UHA3 163 aaKnown RBP8.26□□□□□ -1.09
SF3A1-203ENST00000444440 HYDINQ4G0P3 5121 aa8.26□□□□□ -1.09
SF3A1-203ENST00000444440 NBEAL2Q6ZNJ1 2754 aa8.26□□□□□ -1.09
SF3A1-203ENST00000444440 DPPA5A6NC42 116 aa8.25□□□□□ -1.09
SF3A1-203ENST00000444440 M0QYG6 137 aa8.25□□□□□ -1.09
SF3A1-203ENST00000444440 UPK2O00526 184 aa8.25□□□□□ -1.09
SF3A1-203ENST00000444440 CTDSPLO15194 276 aa8.25□□□□□ -1.09
SF3A1-203ENST00000444440 CD3DP04234 171 aa8.25□□□□□ -1.09
SF3A1-203ENST00000444440 RLN1P04808 185 aa8.25□□□□□ -1.09
SF3A1-203ENST00000444440 CRYGCP07315 174 aa8.25□□□□□ -1.09
SF3A1-203ENST00000444440 IGHV4-30-4P0DP06 118 aa8.25□□□□□ -1.09
SF3A1-203ENST00000444440 PGAM2P15259 253 aa8.25□□□□□ -1.09
SF3A1-203ENST00000444440 CTRB1P17538 263 aa8.25□□□□□ -1.09
SF3A1-203ENST00000444440 HLA-GP17693 338 aa8.25□□□□□ -1.09
SF3A1-203ENST00000444440 MECP2P51608 486 aaKnown RBP8.25□□□□□ -1.09
SF3A1-203ENST00000444440 OR2B8PP59922 312 aa8.25□□□□□ -1.09
SF3A1-203ENST00000444440 RPL8P62917 257 aaKnown RBP8.25□□□□□ -1.09
SF3A1-203ENST00000444440 ATP5G2Q06055 141 aa8.25□□□□□ -1.09
SF3A1-203ENST00000444440 POU2AF1Q16633 256 aa8.25□□□□□ -1.09
SF3A1-203ENST00000444440 CTRB2Q6GPI1 263 aa8.25□□□□□ -1.09
SF3A1-203ENST00000444440 NECAP1Q8NC96 275 aa8.25□□□□□ -1.09
SF3A1-203ENST00000444440 ZFAND1Q8TCF1 268 aa8.25□□□□□ -1.09
SF3A1-203ENST00000444440 ELOVL1Q9BW60 279 aa8.25□□□□□ -1.09
SF3A1-203ENST00000444440 FAM212BQ9NTI7 297 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms