RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 RPL8P62917 257 aaKnown RBP9.94□□□□□ -0.82
PDLIM2-212ENST00000443561 SURF2Q15527 256 aaPredicted RBP9.94□□□□□ -0.82
PDLIM2-212ENST00000443561 SPANXN2Q5MJ10 180 aa9.94□□□□□ -0.82
PDLIM2-212ENST00000443561 MRPL41Q8IXM3 137 aaKnown RBP9.94□□□□□ -0.82
PDLIM2-212ENST00000443561 CADM3Q8N126 398 aa9.94□□□□□ -0.82
PDLIM2-212ENST00000443561 GDPD1Q8N9F7 314 aa9.94□□□□□ -0.82
PDLIM2-212ENST00000443561 POC5Q8NA72 575 aa9.94□□□□□ -0.82
PDLIM2-212ENST00000443561 WFDC9Q8NEX5 89 aa9.94□□□□□ -0.82
PDLIM2-212ENST00000443561 CD300LFQ8TDQ1 290 aa9.94□□□□□ -0.82
PDLIM2-212ENST00000443561 C4orf3Q8WVX3 66 aa9.94□□□□□ -0.82
PDLIM2-212ENST00000443561 MS4A10Q96PG2 267 aa9.94□□□□□ -0.82
PDLIM2-212ENST00000443561 OR5B12Q96R08 314 aa9.94□□□□□ -0.82
PDLIM2-212ENST00000443561 GON7Q9BXV9 100 aa9.94□□□□□ -0.82
PDLIM2-212ENST00000443561 TRBV9A0A0B4J1U6 114 aa9.93□□□□□ -0.82
PDLIM2-212ENST00000443561 C3orf85A0A1B0GTC6 90 aa9.93□□□□□ -0.82
PDLIM2-212ENST00000443561 CRYM-AS1A6NIL9 109 aa9.93□□□□□ -0.82
PDLIM2-212ENST00000443561 G3V4G9 280 aa9.93□□□□□ -0.82
PDLIM2-212ENST00000443561 PLA2G10O15496 165 aa9.93□□□□□ -0.82
PDLIM2-212ENST00000443561 BRI3O95415 125 aa9.93□□□□□ -0.82
PDLIM2-212ENST00000443561 OR5AC1P0C628 307 aa9.93□□□□□ -0.82
PDLIM2-212ENST00000443561 IL7P13232 177 aa9.93□□□□□ -0.82
PDLIM2-212ENST00000443561 RUNX1Q01196 453 aa9.93□□□□□ -0.82
PDLIM2-212ENST00000443561 KLK9Q2XQG4 91 aa9.93□□□□□ -0.82
PDLIM2-212ENST00000443561 SAMD5Q5TGI4 173 aa9.93□□□□□ -0.82
PDLIM2-212ENST00000443561 TOMM5Q8N4H5 51 aa9.93□□□□□ -0.82
PDLIM2-212ENST00000443561 OR4F17Q8NGA8 305 aa9.93□□□□□ -0.82
PDLIM2-212ENST00000443561 OR10W1Q8NGF6 305 aa9.93□□□□□ -0.82
PDLIM2-212ENST00000443561 OR5M8Q8NGP6 311 aa9.93□□□□□ -0.82
PDLIM2-212ENST00000443561 OR4A5Q8NH83 315 aa9.93□□□□□ -0.82
PDLIM2-212ENST00000443561 VSTM2AQ8TAG5 236 aa9.93□□□□□ -0.82
PDLIM2-212ENST00000443561 GLYATL2Q8WU03 294 aa9.93□□□□□ -0.82
PDLIM2-212ENST00000443561 UBE2E2Q96LR5 201 aa9.93□□□□□ -0.82
PDLIM2-212ENST00000443561 FANCD2OSQ96PS1 177 aa9.93□□□□□ -0.82
PDLIM2-212ENST00000443561 OR4F4Q96R69 305 aa9.93□□□□□ -0.82
PDLIM2-212ENST00000443561 PRRT1Q99946 306 aa9.93□□□□□ -0.82
PDLIM2-212ENST00000443561 KLK9Q9UKQ9 250 aa9.93□□□□□ -0.82
PDLIM2-212ENST00000443561 TEX50A0A1B0GTY4 177 aa9.92□□□□□ -0.82
PDLIM2-212ENST00000443561 TRBV12-3P01733 135 aa9.92□□□□□ -0.82
PDLIM2-212ENST00000443561 IGHV3-11P01762 117 aa9.92□□□□□ -0.82
PDLIM2-212ENST00000443561 REG1AP05451 166 aa9.92□□□□□ -0.82
PDLIM2-212ENST00000443561 FGF2P09038 288 aa9.92□□□□□ -0.82
PDLIM2-212ENST00000443561 MAS1LP35410 378 aa9.92□□□□□ -0.82
PDLIM2-212ENST00000443561 MFAP2P55001 183 aa9.92□□□□□ -0.82
PDLIM2-212ENST00000443561 TMEM267Q0VDI3 215 aaPredicted RBP9.92□□□□□ -0.82
PDLIM2-212ENST00000443561 Q6ZRM9 215 aa9.92□□□□□ -0.82
PDLIM2-212ENST00000443561 C1QL4Q86Z23 238 aa9.92□□□□□ -0.82
PDLIM2-212ENST00000443561 TTC9CQ8N5M4 171 aa9.92□□□□□ -0.82
PDLIM2-212ENST00000443561 ZFAND1Q8TCF1 268 aa9.92□□□□□ -0.82
PDLIM2-212ENST00000443561 NAA60Q9H7X0 242 aa9.92□□□□□ -0.82
PDLIM2-212ENST00000443561 TMEM14BQ9NUH8 114 aa9.92□□□□□ -0.82
PDLIM2-212ENST00000443561 MCUBQ9NWR8 336 aa9.92□□□□□ -0.82
PDLIM2-212ENST00000443561 PTTG2Q9NZH5 202 aa9.92□□□□□ -0.82
PDLIM2-212ENST00000443561 IGHV4OR15-8A0A075B7B6 117 aa9.91□□□□□ -0.82
PDLIM2-212ENST00000443561 A0A087WW49 117 aa9.91□□□□□ -0.82
PDLIM2-212ENST00000443561 C15orf61A6NNL5 157 aa9.91□□□□□ -0.82
PDLIM2-212ENST00000443561 NUDT19A8MXV4 375 aa9.91□□□□□ -0.82
PDLIM2-212ENST00000443561 H3BUA1 57 aa9.91□□□□□ -0.82
PDLIM2-212ENST00000443561 CCL24O00175 119 aa9.91□□□□□ -0.82
PDLIM2-212ENST00000443561 TRGV3P03979 118 aa9.91□□□□□ -0.82
PDLIM2-212ENST00000443561 CRYGCP07315 174 aa9.91□□□□□ -0.82
PDLIM2-212ENST00000443561 LGALS1P09382 135 aaKnown RBP9.91□□□□□ -0.82
PDLIM2-212ENST00000443561 CTRB1P17538 263 aa9.91□□□□□ -0.82
PDLIM2-212ENST00000443561 CCR6P51684 374 aa9.91□□□□□ -0.82
PDLIM2-212ENST00000443561 TPPP2P59282 170 aa9.91□□□□□ -0.82
PDLIM2-212ENST00000443561 WT1-ASQ06250 92 aa9.91□□□□□ -0.82
PDLIM2-212ENST00000443561 TMEM187Q14656 261 aa9.91□□□□□ -0.82
PDLIM2-212ENST00000443561 OXLD1Q5BKU9 147 aa9.91□□□□□ -0.82
PDLIM2-212ENST00000443561 CTRB2Q6GPI1 263 aa9.91□□□□□ -0.82
PDLIM2-212ENST00000443561 DMBX1Q8NFW5 382 aa9.91□□□□□ -0.82
PDLIM2-212ENST00000443561 FYTTD1Q96QD9 318 aaKnown RBP9.91□□□□□ -0.82
PDLIM2-212ENST00000443561 TMEM222Q9H0R3 208 aa9.91□□□□□ -0.82
PDLIM2-212ENST00000443561 NDUFA4L2Q9NRX3 87 aa9.91□□□□□ -0.82
PDLIM2-212ENST00000443561 COPZ2Q9P299 210 aa9.91□□□□□ -0.82
PDLIM2-212ENST00000443561 PRKDCP78527 4128 aaKnown RBP9.91□□□□□ -0.82
PDLIM2-212ENST00000443561 A0A0B4J293 547 aa9.9□□□□□ -0.82
PDLIM2-212ENST00000443561 NPIPB5A8MRT5 1133 aa9.9□□□□□ -0.82
PDLIM2-212ENST00000443561 CREBL2O60519 120 aaPredicted RBP9.9□□□□□ -0.82
PDLIM2-212ENST00000443561 CDS2O95674 445 aa9.9□□□□□ -0.82
PDLIM2-212ENST00000443561 IGLL1P15814 213 aa9.9□□□□□ -0.82
PDLIM2-212ENST00000443561 MYCNOSP40205 109 aa9.9□□□□□ -0.82
PDLIM2-212ENST00000443561 ECI1P42126 302 aa9.9□□□□□ -0.82
PDLIM2-212ENST00000443561 IFITM3Q01628 133 aa9.9□□□□□ -0.82
PDLIM2-212ENST00000443561 BEAN1Q3B7T3 259 aa9.9□□□□□ -0.82
PDLIM2-212ENST00000443561 KPRPQ5T749 579 aaPredicted RBP9.9□□□□□ -0.82
PDLIM2-212ENST00000443561 C11orf87Q6NUJ2 197 aa9.9□□□□□ -0.82
PDLIM2-212ENST00000443561 SELENOHQ8IZQ5 122 aaKnown RBP9.9□□□□□ -0.82
PDLIM2-212ENST00000443561 CCDC71LQ8N9Z2 235 aa9.9□□□□□ -0.82
PDLIM2-212ENST00000443561 GALNT14Q96FL9 552 aa9.9□□□□□ -0.82
PDLIM2-212ENST00000443561 TMEM68Q96MH6 324 aa9.9□□□□□ -0.82
PDLIM2-212ENST00000443561 PHB2Q99623 299 aa9.9□□□□□ -0.82
PDLIM2-212ENST00000443561 SPIN2AQ99865 258 aa9.9□□□□□ -0.82
PDLIM2-212ENST00000443561 SPIN2BQ9BPZ2 258 aa9.9□□□□□ -0.82
PDLIM2-212ENST00000443561 COA4Q9NYJ1 87 aa9.9□□□□□ -0.82
PDLIM2-212ENST00000443561 SCP2D1Q9UJQ7 156 aa9.9□□□□□ -0.82
PDLIM2-212ENST00000443561 TEX13DA0A0J9YY54 714 aaPredicted RBP9.89□□□□□ -0.83
PDLIM2-212ENST00000443561 LINC00854A0A1B0GVQ3 168 aa9.89□□□□□ -0.83
PDLIM2-212ENST00000443561 PF4P02776 101 aa9.89□□□□□ -0.83
PDLIM2-212ENST00000443561 PSMB6P28072 239 aa9.89□□□□□ -0.83
PDLIM2-212ENST00000443561 SLC6A1P30531 599 aa9.89□□□□□ -0.83
PDLIM2-212ENST00000443561 SLURP1P55000 103 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms