RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 LHBP01229 141 aa11.72□□□□□ -0.53
LIMD1-202ENST00000440097 MBP02144 154 aa11.72□□□□□ -0.53
LIMD1-202ENST00000440097 HNF4GQ14541 408 aa11.72□□□□□ -0.53
LIMD1-202ENST00000440097 DUX4L9Q6RFH8 374 aaPredicted RBP11.72□□□□□ -0.53
LIMD1-202ENST00000440097 Q6ZRM9 215 aa11.72□□□□□ -0.53
LIMD1-202ENST00000440097 ZNF525Q8N782 197 aa11.72□□□□□ -0.53
LIMD1-202ENST00000440097 CCL13Q99616 98 aa11.72□□□□□ -0.53
LIMD1-202ENST00000440097 FAM234AQ9H0X4 552 aa11.72□□□□□ -0.53
LIMD1-202ENST00000440097 POLR3KQ9Y2Y1 108 aaPredicted RBP11.72□□□□□ -0.53
LIMD1-202ENST00000440097 CENPEQ02224 2701 aa11.72□□□□□ -0.53
LIMD1-202ENST00000440097 MYO18BQ8IUG5 2567 aa11.72□□□□□ -0.53
LIMD1-202ENST00000440097 KIAA1324LA8MWY0 1029 aaPredicted RBP11.72□□□□□ -0.53
LIMD1-202ENST00000440097 IGKV1-5P01602 117 aa11.72□□□□□ -0.53
LIMD1-202ENST00000440097 ADH4P08319 380 aa11.72□□□□□ -0.53
LIMD1-202ENST00000440097 TNFRSF1AP19438 455 aa11.72□□□□□ -0.53
LIMD1-202ENST00000440097 RAB4AP20338 218 aa11.72□□□□□ -0.53
LIMD1-202ENST00000440097 GATA4P43694 442 aa11.72□□□□□ -0.53
LIMD1-202ENST00000440097 LINC00205P59089 165 aa11.72□□□□□ -0.53
LIMD1-202ENST00000440097 RPL30P62888 115 aaKnown RBP11.72□□□□□ -0.53
LIMD1-202ENST00000440097 MEF2BQ02080 365 aaPredicted RBP11.72□□□□□ -0.53
LIMD1-202ENST00000440097 LY6DQ14210 128 aa11.72□□□□□ -0.53
LIMD1-202ENST00000440097 TMEM41BQ5BJD5 291 aa11.72□□□□□ -0.53
LIMD1-202ENST00000440097 FGFRL1Q8N441 504 aa11.72□□□□□ -0.53
LIMD1-202ENST00000440097 R3HDM4Q96D70 268 aa11.72□□□□□ -0.53
LIMD1-202ENST00000440097 PSMG3Q9BT73 122 aaPredicted RBP11.72□□□□□ -0.53
LIMD1-202ENST00000440097 FKBP11Q9NYL4 201 aa11.72□□□□□ -0.53
LIMD1-202ENST00000440097 ASH1LQ9NR48 2969 aaKnown RBP11.71□□□□□ -0.53
LIMD1-202ENST00000440097 CCL21O00585 134 aa11.71□□□□□ -0.53
LIMD1-202ENST00000440097 G6PCP35575 357 aa11.71□□□□□ -0.53
LIMD1-202ENST00000440097 GPR12P47775 334 aa11.71□□□□□ -0.53
LIMD1-202ENST00000440097 KLRB1Q12918 225 aa11.71□□□□□ -0.53
LIMD1-202ENST00000440097 C21orf62-AS1Q17RA5 79 aa11.71□□□□□ -0.53
LIMD1-202ENST00000440097 C1orf194Q5T5A4 169 aa11.71□□□□□ -0.53
LIMD1-202ENST00000440097 CENPVQ7Z7K6 275 aaPredicted RBP11.71□□□□□ -0.53
LIMD1-202ENST00000440097 GBGT1Q8N5D6 347 aa11.71□□□□□ -0.53
LIMD1-202ENST00000440097 LHX4Q969G2 390 aa11.71□□□□□ -0.53
LIMD1-202ENST00000440097 RAB40CQ96S21 281 aa11.71□□□□□ -0.53
LIMD1-202ENST00000440097 SAP30LQ9HAJ7 183 aa11.71□□□□□ -0.53
LIMD1-202ENST00000440097 DSCAMO60469 2012 aa11.71□□□□□ -0.54
LIMD1-202ENST00000440097 LRRC30A6NM36 301 aa11.71□□□□□ -0.54
LIMD1-202ENST00000440097 C17orf100A8MU93 164 aa11.71□□□□□ -0.54
LIMD1-202ENST00000440097 HMGB3O15347 200 aaKnown RBP11.71□□□□□ -0.54
LIMD1-202ENST00000440097 TMPRSS2O15393 492 aa11.71□□□□□ -0.54
LIMD1-202ENST00000440097 HAPLN4Q86UW8 402 aa11.71□□□□□ -0.54
LIMD1-202ENST00000440097 ZBTB34Q8NCN2 500 aa11.71□□□□□ -0.54
LIMD1-202ENST00000440097 OR2T10Q8NGZ9 312 aa11.71□□□□□ -0.54
LIMD1-202ENST00000440097 DYNLRB1Q9NP97 96 aa11.71□□□□□ -0.54
LIMD1-202ENST00000440097 OR6C3Q9NZP0 311 aa11.71□□□□□ -0.54
LIMD1-202ENST00000440097 UTP20O75691 2785 aaKnown RBP11.71□□□□□ -0.54
LIMD1-202ENST00000440097 USP24Q9UPU5 2620 aa11.71□□□□□ -0.54
LIMD1-202ENST00000440097 A6NNC1 897 aa11.7□□□□□ -0.54
LIMD1-202ENST00000440097 C15orf65H3BRN8 121 aa11.7□□□□□ -0.54
LIMD1-202ENST00000440097 LRRC75BQ2VPJ9 315 aa11.7□□□□□ -0.54
LIMD1-202ENST00000440097 ACOT6Q3I5F7 207 aaPredicted RBP11.7□□□□□ -0.54
LIMD1-202ENST00000440097 FAM216BQ8N7L0 139 aa11.7□□□□□ -0.54
LIMD1-202ENST00000440097 CCL17Q92583 94 aa11.7□□□□□ -0.54
LIMD1-202ENST00000440097 LEAP2Q969E1 77 aa11.7□□□□□ -0.54
LIMD1-202ENST00000440097 LSM10Q969L4 123 aaKnown RBP11.7□□□□□ -0.54
LIMD1-202ENST00000440097 PARLQ9H300 379 aa11.7□□□□□ -0.54
LIMD1-202ENST00000440097 SLC39A9Q9NUM3 307 aa11.7□□□□□ -0.54
LIMD1-202ENST00000440097 DYSFO75923 2080 aa11.7□□□□□ -0.54
LIMD1-202ENST00000440097 KIR2DL5BA0A0G2JN68 375 aa11.7□□□□□ -0.54
LIMD1-202ENST00000440097 KIR2DL5BA0A0G2JPC4 375 aa11.7□□□□□ -0.54
LIMD1-202ENST00000440097 RPL29P47914 159 aaKnown RBP11.7□□□□□ -0.54
LIMD1-202ENST00000440097 SERF2P84101 59 aa11.7□□□□□ -0.54
LIMD1-202ENST00000440097 KIR2DL5AQ8N109 375 aa11.7□□□□□ -0.54
LIMD1-202ENST00000440097 C5orf30Q96GV9 206 aa11.7□□□□□ -0.54
LIMD1-202ENST00000440097 TMEM208Q9BTX3 173 aa11.7□□□□□ -0.54
LIMD1-202ENST00000440097 PSENENQ9NZ42 101 aa11.7□□□□□ -0.54
LIMD1-202ENST00000440097 C17orf98A8MV24 154 aa11.69□□□□□ -0.54
LIMD1-202ENST00000440097 S1PR2O95136 353 aa11.69□□□□□ -0.54
LIMD1-202ENST00000440097 HTD2P86397 168 aa11.69□□□□□ -0.54
LIMD1-202ENST00000440097 NEUROG1Q92886 237 aa11.69□□□□□ -0.54
LIMD1-202ENST00000440097 CALYQ9NYX4 217 aa11.69□□□□□ -0.54
LIMD1-202ENST00000440097 FLNCQ14315 2725 aa11.69□□□□□ -0.54
LIMD1-202ENST00000440097 TRGV10A0A0A0MS01 117 aa11.69□□□□□ -0.54
LIMD1-202ENST00000440097 A0A1B0GUS0 222 aa11.69□□□□□ -0.54
LIMD1-202ENST00000440097 DLEU1O43261 78 aa11.69□□□□□ -0.54
LIMD1-202ENST00000440097 SYNGR2O43760 224 aa11.69□□□□□ -0.54
LIMD1-202ENST00000440097 GGCTO75223 188 aaKnown RBP11.69□□□□□ -0.54
LIMD1-202ENST00000440097 CLDN14O95500 239 aa11.69□□□□□ -0.54
LIMD1-202ENST00000440097 IGKV1D-33P01593 117 aa11.69□□□□□ -0.54
LIMD1-202ENST00000440097 IGKV1-33P01594 117 aa11.69□□□□□ -0.54
LIMD1-202ENST00000440097 CNN1P51911 297 aaKnown RBP11.69□□□□□ -0.54
LIMD1-202ENST00000440097 LINC01560Q8TB33 94 aa11.69□□□□□ -0.54
LIMD1-202ENST00000440097 GATAD1Q8WUU5 269 aa11.69□□□□□ -0.54
LIMD1-202ENST00000440097 NAGKQ9UJ70 344 aa11.69□□□□□ -0.54
LIMD1-202ENST00000440097 GOLT1BQ9Y3E0 138 aa11.69□□□□□ -0.54
LIMD1-202ENST00000440097 ANKHD1Q8IWZ3 2542 aaKnown RBP11.69□□□□□ -0.54
LIMD1-202ENST00000440097 NPSP0C0P6 89 aa11.68□□□□□ -0.54
LIMD1-202ENST00000440097 MORN2Q502X0 79 aa11.68□□□□□ -0.54
LIMD1-202ENST00000440097 STUMQ69YW2 141 aa11.68□□□□□ -0.54
LIMD1-202ENST00000440097 ZNF705AQ6ZN79 300 aaPredicted RBP11.68□□□□□ -0.54
LIMD1-202ENST00000440097 SSX8Q7RTT4 187 aa11.68□□□□□ -0.54
LIMD1-202ENST00000440097 RPP25LQ8N5L8 163 aaKnown RBP11.68□□□□□ -0.54
LIMD1-202ENST00000440097 OR4C12Q96R67 309 aa11.68□□□□□ -0.54
LIMD1-202ENST00000440097 WDR61Q9GZS3 305 aaKnown RBP11.68□□□□□ -0.54
LIMD1-202ENST00000440097 JPT1Q9UK76 154 aa11.68□□□□□ -0.54
LIMD1-202ENST00000440097 SLC25A6P12236 298 aa11.68□□□□□ -0.54
LIMD1-202ENST00000440097 OR5T1Q8NG75 326 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms