RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 RBM38Q9H0Z9 239 aaKnown RBP13.73□□□□□ -0.21
NCSTN-208ENST00000438008 RANGRFQ9HD47 186 aaPredicted RBP13.73□□□□□ -0.21
NCSTN-208ENST00000438008 TMEM140Q9NV12 185 aa13.73□□□□□ -0.21
NCSTN-208ENST00000438008 ZNF257Q9Y2Q1 563 aa13.73□□□□□ -0.21
NCSTN-208ENST00000438008 TRAV3A0A0B4J244 114 aa13.72□□□□□ -0.21
NCSTN-208ENST00000438008 HMX3A6NHT5 357 aa13.72□□□□□ -0.21
NCSTN-208ENST00000438008 FAM223BA6NKX1 122 aa13.72□□□□□ -0.21
NCSTN-208ENST00000438008 OVOL1O14753 267 aa13.72□□□□□ -0.21
NCSTN-208ENST00000438008 RBMXL2O75526 392 aaKnown RBP13.72□□□□□ -0.21
NCSTN-208ENST00000438008 CRYGCP07315 174 aa13.72□□□□□ -0.21
NCSTN-208ENST00000438008 INSL3P51460 131 aa13.72□□□□□ -0.21
NCSTN-208ENST00000438008 SLURP1P55000 103 aa13.72□□□□□ -0.21
NCSTN-208ENST00000438008 ERVK-16P61578 105 aa13.72□□□□□ -0.21
NCSTN-208ENST00000438008 ZNF45Q02386 682 aa13.72□□□□□ -0.21
NCSTN-208ENST00000438008 STEAP1BQ6NZ63 245 aa13.72□□□□□ -0.21
NCSTN-208ENST00000438008 ZNF343Q6P1L6 599 aa13.72□□□□□ -0.21
NCSTN-208ENST00000438008 TBC1D26Q86UD7 250 aa13.72□□□□□ -0.21
NCSTN-208ENST00000438008 FAM223AQ8IWN6 122 aa13.72□□□□□ -0.21
NCSTN-208ENST00000438008 OR4D10Q8NGI6 311 aa13.72□□□□□ -0.21
NCSTN-208ENST00000438008 ZNF486Q96H40 463 aaPredicted RBP13.72□□□□□ -0.21
NCSTN-208ENST00000438008 FYTTD1Q96QD9 318 aaKnown RBP13.72□□□□□ -0.21
NCSTN-208ENST00000438008 RSL24D1Q9UHA3 163 aaKnown RBP13.72□□□□□ -0.21
NCSTN-208ENST00000438008 CGB1A6NKQ9 187 aa13.71□□□□□ -0.21
NCSTN-208ENST00000438008 MARCH11A6NNE9 402 aa13.71□□□□□ -0.21
NCSTN-208ENST00000438008 ZNF701M0R085 212 aaPredicted RBP13.71□□□□□ -0.21
NCSTN-208ENST00000438008 GSTZ1O43708 216 aaPredicted RBP13.71□□□□□ -0.21
NCSTN-208ENST00000438008 RAB3DO95716 219 aa13.71□□□□□ -0.21
NCSTN-208ENST00000438008 PTBP1P26599 531 aaKnown RBP eCLIP13.71□□□□□ -0.21
NCSTN-208ENST00000438008 TNFSF8P32971 234 aa13.71□□□□□ -0.21
NCSTN-208ENST00000438008 OR2B8PP59922 312 aa13.71□□□□□ -0.21
NCSTN-208ENST00000438008 RND3P61587 244 aa13.71□□□□□ -0.21
NCSTN-208ENST00000438008 RHOGP84095 191 aa13.71□□□□□ -0.21
NCSTN-208ENST00000438008 KLK9Q2XQG4 91 aa13.71□□□□□ -0.21
NCSTN-208ENST00000438008 TERB2Q8NHR7 220 aa13.71□□□□□ -0.21
NCSTN-208ENST00000438008 MRAPQ8TCY5 172 aa13.71□□□□□ -0.21
NCSTN-208ENST00000438008 SRSF8Q9BRL6 282 aaKnown RBP13.71□□□□□ -0.21
NCSTN-208ENST00000438008 KLK9Q9UKQ9 250 aa13.71□□□□□ -0.21
NCSTN-208ENST00000438008 CCDC160A6NGH7 325 aa13.7□□□□□ -0.22
NCSTN-208ENST00000438008 PRH1P02810 166 aa13.7□□□□□ -0.22
NCSTN-208ENST00000438008 MYOD1P15172 320 aa13.7□□□□□ -0.22
NCSTN-208ENST00000438008 ZP3P21754 424 aa13.7□□□□□ -0.22
NCSTN-208ENST00000438008 PSMB6P28072 239 aa13.7□□□□□ -0.22
NCSTN-208ENST00000438008 MEF2DQ14814 521 aa13.7□□□□□ -0.22
NCSTN-208ENST00000438008 NECAP1Q8NC96 275 aa13.7□□□□□ -0.22
NCSTN-208ENST00000438008 COMMD5Q9GZQ3 224 aa13.7□□□□□ -0.22
NCSTN-208ENST00000438008 AKIP1Q9NQ31 210 aa13.7□□□□□ -0.22
NCSTN-208ENST00000438008 PEF1Q9UBV8 284 aaKnown RBP13.7□□□□□ -0.22
NCSTN-208ENST00000438008 DPPA5A6NC42 116 aa13.69□□□□□ -0.22
NCSTN-208ENST00000438008 FABP12A6NFH5 140 aa13.69□□□□□ -0.22
NCSTN-208ENST00000438008 K7EIL1 84 aa13.69□□□□□ -0.22
NCSTN-208ENST00000438008 KRASP01116 189 aa13.69□□□□□ -0.22
NCSTN-208ENST00000438008 PGAM2P15259 253 aa13.69□□□□□ -0.22
NCSTN-208ENST00000438008 AREGP15514 252 aa13.69□□□□□ -0.22
NCSTN-208ENST00000438008 CTRB1P17538 263 aa13.69□□□□□ -0.22
NCSTN-208ENST00000438008 DEFA5Q01523 94 aa13.69□□□□□ -0.22
NCSTN-208ENST00000438008 ATP5G2Q06055 141 aa13.69□□□□□ -0.22
NCSTN-208ENST00000438008 CTRB2Q6GPI1 263 aa13.69□□□□□ -0.22
NCSTN-208ENST00000438008 ZNF429Q86V71 674 aa13.69□□□□□ -0.22
NCSTN-208ENST00000438008 WI2-2373I1.2A0A1W2PRP0 233 aa13.68□□□□□ -0.22
NCSTN-208ENST00000438008 ANKRD34BA5PLL1 514 aa13.68□□□□□ -0.22
NCSTN-208ENST00000438008 DHFRP00374 187 aa13.68□□□□□ -0.22
NCSTN-208ENST00000438008 RPA2P15927 270 aa13.68□□□□□ -0.22
NCSTN-208ENST00000438008 G6PCP35575 357 aa13.68□□□□□ -0.22
NCSTN-208ENST00000438008 THOC7Q6I9Y2 204 aaKnown RBP13.68□□□□□ -0.22
NCSTN-208ENST00000438008 ACSM6Q6P461 480 aa13.68□□□□□ -0.22
NCSTN-208ENST00000438008 ZFAND1Q8TCF1 268 aa13.68□□□□□ -0.22
NCSTN-208ENST00000438008 FANCD2OSQ96PS1 177 aa13.68□□□□□ -0.22
NCSTN-208ENST00000438008 QTRT1Q9BXR0 403 aaKnown RBP13.68□□□□□ -0.22
NCSTN-208ENST00000438008 IGLC7A0M8Q6 106 aa13.67□□□□□ -0.22
NCSTN-208ENST00000438008 DISC1C4P0D8 188 aa13.67□□□□□ -0.22
NCSTN-208ENST00000438008 OR2J3O76001 311 aa13.67□□□□□ -0.22
NCSTN-208ENST00000438008 AKAIN1P0CW23 69 aa13.67□□□□□ -0.22
NCSTN-208ENST00000438008 PI3P19957 117 aa13.67□□□□□ -0.22
NCSTN-208ENST00000438008 ECI1P42126 302 aa13.67□□□□□ -0.22
NCSTN-208ENST00000438008 PIGPP57054 158 aa13.67□□□□□ -0.22
NCSTN-208ENST00000438008 KLF5Q13887 457 aaPredicted RBP13.67□□□□□ -0.22
NCSTN-208ENST00000438008 SCGB2B2Q4G0G5 96 aa13.67□□□□□ -0.22
NCSTN-208ENST00000438008 FAM209BQ5JX69 171 aa13.67□□□□□ -0.22
NCSTN-208ENST00000438008 OR1L8Q8NGR8 309 aa13.67□□□□□ -0.22
NCSTN-208ENST00000438008 MRGPRFQ96AM1 343 aa13.67□□□□□ -0.22
NCSTN-208ENST00000438008 SEC22AQ96IW7 307 aa13.67□□□□□ -0.22
NCSTN-208ENST00000438008 TSC22D3Q99576 134 aa13.67□□□□□ -0.22
NCSTN-208ENST00000438008 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.66□□□□□ -0.22
NCSTN-208ENST00000438008 TEX50A0A1B0GTY4 177 aa13.66□□□□□ -0.22
NCSTN-208ENST00000438008 ANKRD20A5PA0PJZ0 165 aa13.66□□□□□ -0.22
NCSTN-208ENST00000438008 H0Y980 276 aa13.66□□□□□ -0.22
NCSTN-208ENST00000438008 SNAPC5O75971 98 aa13.66□□□□□ -0.22
NCSTN-208ENST00000438008 IGKV1-39P01597 117 aa13.66□□□□□ -0.22
NCSTN-208ENST00000438008 TRBV12-3P01733 135 aa13.66□□□□□ -0.22
NCSTN-208ENST00000438008 IGKV1D-39P04432 117 aa13.66□□□□□ -0.22
NCSTN-208ENST00000438008 CTSDP07339 412 aaPredicted RBP13.66□□□□□ -0.22
NCSTN-208ENST00000438008 TRAPPC2P0DI81 140 aa13.66□□□□□ -0.22
NCSTN-208ENST00000438008 TRAPPC2BP0DI82 140 aa13.66□□□□□ -0.22
NCSTN-208ENST00000438008 HIST1H1BP16401 226 aaKnown RBP13.66□□□□□ -0.22
NCSTN-208ENST00000438008 PPP5CP53041 499 aa13.66□□□□□ -0.22
NCSTN-208ENST00000438008 EXOSC2Q13868 293 aaKnown RBP13.66□□□□□ -0.22
NCSTN-208ENST00000438008 C15orf32Q32M92 178 aa13.66□□□□□ -0.22
NCSTN-208ENST00000438008 C19orf35Q6ZS72 473 aa13.66□□□□□ -0.22
NCSTN-208ENST00000438008 HSD17B13Q7Z5P4 300 aaPredicted RBP13.66□□□□□ -0.22
NCSTN-208ENST00000438008 OR4C16Q8NGL9 310 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms