RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 ASCL4Q6XD76 172 aa9.55□□□□□ -0.88
SCN4A-201ENST00000435607 CYP2G1PQ6ZSU1 146 aa9.55□□□□□ -0.88
SCN4A-201ENST00000435607 NPIPB3Q92617 1050 aa9.55□□□□□ -0.88
SCN4A-201ENST00000435607 MRPL18Q9H0U6 180 aaKnown RBP9.55□□□□□ -0.88
SCN4A-201ENST00000435607 F11RQ9Y624 299 aaKnown RBP9.55□□□□□ -0.88
SCN4A-201ENST00000435607 CDCP2Q5VXM1 449 aa9.55□□□□□ -0.88
SCN4A-201ENST00000435607 DMRTA2Q96SC8 542 aa9.55□□□□□ -0.88
SCN4A-201ENST00000435607 SLC25A15Q9Y619 301 aa9.55□□□□□ -0.88
SCN4A-201ENST00000435607 PKD1L3Q7Z443 1732 aa9.55□□□□□ -0.88
SCN4A-201ENST00000435607 LTBRP36941 435 aa9.55□□□□□ -0.88
SCN4A-201ENST00000435607 HBBP68871 147 aa9.55□□□□□ -0.88
SCN4A-201ENST00000435607 SLC25A38Q96DW6 304 aa9.55□□□□□ -0.88
SCN4A-201ENST00000435607 ABHD17AQ96GS6 310 aa9.55□□□□□ -0.88
SCN4A-201ENST00000435607 PLSCR2Q9NRY7 297 aa9.55□□□□□ -0.88
SCN4A-201ENST00000435607 UQCR10Q9UDW1 63 aa9.55□□□□□ -0.88
SCN4A-201ENST00000435607 TCF19Q9Y242 345 aa9.55□□□□□ -0.88
SCN4A-201ENST00000435607 FXYD1O00168 92 aa9.55□□□□□ -0.88
SCN4A-201ENST00000435607 OR10S1Q8NGN2 331 aa9.55□□□□□ -0.88
SCN4A-201ENST00000435607 IGHV3-66A0A0C4DH42 116 aa9.55□□□□□ -0.88
SCN4A-201ENST00000435607 CELA2AP08217 269 aa9.55□□□□□ -0.88
SCN4A-201ENST00000435607 PEAR1Q5VY43 1037 aaPredicted RBP9.55□□□□□ -0.88
SCN4A-201ENST00000435607 RNF182Q8N6D2 247 aa9.55□□□□□ -0.88
SCN4A-201ENST00000435607 NAPSAO96009 420 aa9.55□□□□□ -0.88
SCN4A-201ENST00000435607 WNT10AQ9GZT5 417 aa9.55□□□□□ -0.88
SCN4A-201ENST00000435607 DDX60LQ5H9U9 1706 aaKnown RBP9.55□□□□□ -0.88
SCN4A-201ENST00000435607 TRAV21A0A0B4J279 112 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 CD7P09564 240 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 COX6A1P12074 109 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 ZNF345Q14585 488 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 ZNF506Q5JVG8 444 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 NCMAPQ5T1S8 102 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 Q6AWC8 147 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 TEX45Q8NA69 505 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 ISOC2Q96AB3 205 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 IGHV3-49A0A0A0MS15 119 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 A0A1B0GW15 77 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 PGLYRP1O75594 196 aaPredicted RBP9.54□□□□□ -0.88
SCN4A-201ENST00000435607 OR10J3Q5JRS4 329 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 FOXA2Q9Y261 457 aaPredicted RBP9.54□□□□□ -0.88
SCN4A-201ENST00000435607 HS3ST3B1Q9Y662 390 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 LOC101059948A0A1B0GTJ6 334 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 SAA1P0DJI8 122 aaPredicted RBP9.54□□□□□ -0.88
SCN4A-201ENST00000435607 FAM89BQ8N5H3 189 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 RARRES2Q99969 163 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 CHCHD5Q9BSY4 110 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 JPT2Q9H910 190 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 MVDP53602 400 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 SLC25A47Q6Q0C1 308 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 SP7Q8TDD2 431 aaPredicted RBP9.54□□□□□ -0.88
SCN4A-201ENST00000435607 SLIRPQ9GZT3 109 aaKnown RBP9.54□□□□□ -0.88
SCN4A-201ENST00000435607 IGHV3OR16-13A0A075B7E8 117 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 IGHV3-74A0A0B4J1X5 117 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 HOXD3P31249 432 aaPredicted RBP9.54□□□□□ -0.88
SCN4A-201ENST00000435607 FAM166AQ6J272 317 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 NABP2Q9BQ15 211 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 NRN1Q9NPD7 142 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 CACNA1DQ01668 2161 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 PEX7O00628 323 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 IGHV3-23P01764 117 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 SMIM6P0DI80 62 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 BCORQ6W2J9 1755 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 SAP30O75446 220 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 LEAP2Q969E1 77 aa9.54□□□□□ -0.88
SCN4A-201ENST00000435607 FSTP19883 344 aa9.53□□□□□ -0.88
SCN4A-201ENST00000435607 RGPD3A6NKT7 1758 aaPredicted RBP9.53□□□□□ -0.88
SCN4A-201ENST00000435607 SPNP16150 400 aa9.53□□□□□ -0.88
SCN4A-201ENST00000435607 KLK2P20151 261 aa9.53□□□□□ -0.88
SCN4A-201ENST00000435607 PPP1R32Q7Z5V6 425 aa9.53□□□□□ -0.88
SCN4A-201ENST00000435607 SLC25A45Q8N413 288 aa9.53□□□□□ -0.88
SCN4A-201ENST00000435607 FBXL15Q9H469 300 aa9.53□□□□□ -0.88
SCN4A-201ENST00000435607 VKORC1L1Q8N0U8 176 aa9.53□□□□□ -0.88
SCN4A-201ENST00000435607 FMC1Q96HJ9 113 aa9.53□□□□□ -0.88
SCN4A-201ENST00000435607 ASCL2Q99929 193 aa9.53□□□□□ -0.88
SCN4A-201ENST00000435607 SLC50A1Q9BRV3 221 aa9.53□□□□□ -0.88
SCN4A-201ENST00000435607 NPCDR1Q9BY65 106 aa9.53□□□□□ -0.88
SCN4A-201ENST00000435607 A0A1B0GTL3 188 aa9.53□□□□□ -0.88
SCN4A-201ENST00000435607 HSPB1P04792 205 aaKnown RBP9.53□□□□□ -0.88
SCN4A-201ENST00000435607 PARLQ9H300 379 aa9.53□□□□□ -0.88
SCN4A-201ENST00000435607 SIRT4Q9Y6E7 314 aaPredicted RBP9.53□□□□□ -0.88
SCN4A-201ENST00000435607 RREB1Q92766 1687 aa9.53□□□□□ -0.88
SCN4A-201ENST00000435607 CRYBB3P26998 211 aa9.53□□□□□ -0.88
SCN4A-201ENST00000435607 SELENOHQ8IZQ5 122 aaKnown RBP9.53□□□□□ -0.88
SCN4A-201ENST00000435607 CYB561D1Q8N8Q1 229 aa9.53□□□□□ -0.88
SCN4A-201ENST00000435607 ST20Q9HBF5 79 aa9.53□□□□□ -0.88
SCN4A-201ENST00000435607 A0A1W2PP11 408 aa9.52□□□□□ -0.88
SCN4A-201ENST00000435607 ASPDHA6ND91 283 aa9.52□□□□□ -0.88
SCN4A-201ENST00000435607 GGTLC3B5MD39 225 aa9.52□□□□□ -0.88
SCN4A-201ENST00000435607 WNT2P09544 360 aa9.52□□□□□ -0.89
SCN4A-201ENST00000435607 C1QTNF4Q9BXJ3 329 aa9.52□□□□□ -0.89
SCN4A-201ENST00000435607 GPR132Q9UNW8 380 aa9.52□□□□□ -0.89
SCN4A-201ENST00000435607 ABCA7Q8IZY2 2146 aa9.52□□□□□ -0.89
SCN4A-201ENST00000435607 TRAV8-6A0A0B4J262 113 aa9.52□□□□□ -0.89
SCN4A-201ENST00000435607 E9PQ18 207 aa9.52□□□□□ -0.89
SCN4A-201ENST00000435607 NBEAP1P0C6P0 100 aa9.52□□□□□ -0.89
SCN4A-201ENST00000435607 TMEM252Q8N6L7 170 aa9.52□□□□□ -0.89
SCN4A-201ENST00000435607 RNASEH2CQ8TDP1 164 aaKnown RBP9.52□□□□□ -0.89
SCN4A-201ENST00000435607 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.52□□□□□ -0.89
SCN4A-201ENST00000435607 TTC9CQ8N5M4 171 aa9.52□□□□□ -0.89
SCN4A-201ENST00000435607 MYOFQ9NZM1 2061 aa9.52□□□□□ -0.89
SCN4A-201ENST00000435607 ERGP11308 486 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms