RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 LMO1P25800 156 aa12.9□□□□□ -0.34
SCARF1-203ENST00000434376 MOB1BQ7L9L4 216 aa12.9□□□□□ -0.34
SCARF1-203ENST00000434376 MOB3BQ86TA1 216 aa12.9□□□□□ -0.34
SCARF1-203ENST00000434376 DYNLRB1Q9NP97 96 aa12.9□□□□□ -0.34
SCARF1-203ENST00000434376 LRRK2Q5S007 2527 aa12.9□□□□□ -0.34
SCARF1-203ENST00000434376 PROP1O75360 226 aa12.9□□□□□ -0.34
SCARF1-203ENST00000434376 MBP02144 154 aa12.9□□□□□ -0.34
SCARF1-203ENST00000434376 GATA2P23769 480 aaPredicted RBP12.9□□□□□ -0.34
SCARF1-203ENST00000434376 S1PR3Q99500 378 aa12.9□□□□□ -0.34
SCARF1-203ENST00000434376 MBNL3Q9NUK0 354 aaKnown RBP12.9□□□□□ -0.34
SCARF1-203ENST00000434376 GRIFINA4D1Z8 144 aa12.9□□□□□ -0.35
SCARF1-203ENST00000434376 PGPEP1LA6NFU8 196 aa12.9□□□□□ -0.35
SCARF1-203ENST00000434376 PSMB3P49720 205 aa12.9□□□□□ -0.35
SCARF1-203ENST00000434376 BSPH1Q075Z2 132 aa12.9□□□□□ -0.35
SCARF1-203ENST00000434376 CISD1Q9NZ45 108 aaKnown RBP12.9□□□□□ -0.35
SCARF1-203ENST00000434376 NAT8Q9UHE5 227 aa12.9□□□□□ -0.35
SCARF1-203ENST00000434376 A0A0G2JNJ9 132 aa12.89□□□□□ -0.35
SCARF1-203ENST00000434376 TMEM210A6NLX4 147 aa12.89□□□□□ -0.35
SCARF1-203ENST00000434376 LRRC30A6NM36 301 aa12.89□□□□□ -0.35
SCARF1-203ENST00000434376 TMEM41BQ5BJD5 291 aa12.89□□□□□ -0.35
SCARF1-203ENST00000434376 ACSM6Q6P461 480 aa12.89□□□□□ -0.35
SCARF1-203ENST00000434376 TEX38Q6PEX7 206 aa12.89□□□□□ -0.35
SCARF1-203ENST00000434376 LINC00596Q86U02 117 aa12.89□□□□□ -0.35
SCARF1-203ENST00000434376 DOLPP1Q86YN1 238 aa12.89□□□□□ -0.35
SCARF1-203ENST00000434376 OR51G1Q8NGK1 321 aa12.89□□□□□ -0.35
SCARF1-203ENST00000434376 C2orf88Q9BSF0 95 aa12.89□□□□□ -0.35
SCARF1-203ENST00000434376 SNHG12Q9BXW3 62 aa12.89□□□□□ -0.35
SCARF1-203ENST00000434376 CALYQ9NYX4 217 aa12.89□□□□□ -0.35
SCARF1-203ENST00000434376 Q9UFV3 132 aa12.89□□□□□ -0.35
SCARF1-203ENST00000434376 DOPEY2Q9Y3R5 2298 aa12.89□□□□□ -0.35
SCARF1-203ENST00000434376 DVL1O14640 695 aa12.89□□□□□ -0.35
SCARF1-203ENST00000434376 PAGE4O60829 102 aa12.89□□□□□ -0.35
SCARF1-203ENST00000434376 CEACAM1P13688 526 aa12.89□□□□□ -0.35
SCARF1-203ENST00000434376 CD40P25942 277 aa12.89□□□□□ -0.35
SCARF1-203ENST00000434376 ERVK-16P61578 105 aa12.89□□□□□ -0.35
SCARF1-203ENST00000434376 NUTF2P61970 127 aaKnown RBP12.89□□□□□ -0.35
SCARF1-203ENST00000434376 MLANAQ16655 118 aa12.89□□□□□ -0.35
SCARF1-203ENST00000434376 TAF15Q92804 592 aaKnown RBP eCLIP12.89□□□□□ -0.35
SCARF1-203ENST00000434376 PARLQ9H300 379 aa12.89□□□□□ -0.35
SCARF1-203ENST00000434376 SRD5A3Q9H8P0 318 aa12.89□□□□□ -0.35
SCARF1-203ENST00000434376 NOTCH3Q9UM47 2321 aa12.89□□□□□ -0.35
SCARF1-203ENST00000434376 RRHO14718 337 aa12.88□□□□□ -0.35
SCARF1-203ENST00000434376 ENSAO43768 121 aaKnown RBP12.88□□□□□ -0.35
SCARF1-203ENST00000434376 CGAP01215 116 aa12.88□□□□□ -0.35
SCARF1-203ENST00000434376 NUBP1P53384 320 aa12.88□□□□□ -0.35
SCARF1-203ENST00000434376 MEF2BQ02080 365 aaPredicted RBP12.88□□□□□ -0.35
SCARF1-203ENST00000434376 TOMM20LQ6UXN7 152 aa12.88□□□□□ -0.35
SCARF1-203ENST00000434376 RPP25LQ8N5L8 163 aaKnown RBP12.88□□□□□ -0.35
SCARF1-203ENST00000434376 OR2T10Q8NGZ9 312 aa12.88□□□□□ -0.35
SCARF1-203ENST00000434376 OR5R1Q8NH85 324 aa12.88□□□□□ -0.35
SCARF1-203ENST00000434376 FKBP11Q9NYL4 201 aa12.88□□□□□ -0.35
SCARF1-203ENST00000434376 RNF212BA8MTL3 300 aa12.88□□□□□ -0.35
SCARF1-203ENST00000434376 GRNP28799 593 aaKnown RBP12.88□□□□□ -0.35
SCARF1-203ENST00000434376 PINX1Q96BK5 328 aaKnown RBP12.88□□□□□ -0.35
SCARF1-203ENST00000434376 GCM1Q9NP62 436 aa12.88□□□□□ -0.35
SCARF1-203ENST00000434376 EPG5Q9HCE0 2579 aa12.88□□□□□ -0.35
SCARF1-203ENST00000434376 C1QTNF9BB2RNN3 333 aa12.88□□□□□ -0.35
SCARF1-203ENST00000434376 SLC25A6P12236 298 aa12.88□□□□□ -0.35
SCARF1-203ENST00000434376 ASPHD1Q5U4P2 390 aa12.88□□□□□ -0.35
SCARF1-203ENST00000434376 MRGPRGQ86SM5 289 aa12.88□□□□□ -0.35
SCARF1-203ENST00000434376 TMEM256Q8N2U0 113 aa12.88□□□□□ -0.35
SCARF1-203ENST00000434376 OR10G4Q8NGN3 311 aa12.88□□□□□ -0.35
SCARF1-203ENST00000434376 OR10G9Q8NGN4 311 aa12.88□□□□□ -0.35
SCARF1-203ENST00000434376 OR10G7Q8NGN6 311 aa12.88□□□□□ -0.35
SCARF1-203ENST00000434376 IGHV1-46P01743 117 aa12.87□□□□□ -0.35
SCARF1-203ENST00000434376 RPL23P62829 140 aaKnown RBP12.87□□□□□ -0.35
SCARF1-203ENST00000434376 SLC35E4Q6ICL7 350 aa12.87□□□□□ -0.35
SCARF1-203ENST00000434376 MS4A10Q96PG2 267 aa12.87□□□□□ -0.35
SCARF1-203ENST00000434376 LRFN3Q9BTN0 628 aa12.87□□□□□ -0.35
SCARF1-203ENST00000434376 PAM16Q9Y3D7 125 aa12.87□□□□□ -0.35
SCARF1-203ENST00000434376 DYSFO75923 2080 aa12.87□□□□□ -0.35
SCARF1-203ENST00000434376 FLNCQ14315 2725 aa12.87□□□□□ -0.35
SCARF1-203ENST00000434376 TRBV24-1A0A075B6N3 115 aa12.87□□□□□ -0.35
SCARF1-203ENST00000434376 M0R143 59 aa12.87□□□□□ -0.35
SCARF1-203ENST00000434376 IQCJQ1A5X6 159 aa12.87□□□□□ -0.35
SCARF1-203ENST00000434376 MORN2Q502X0 79 aa12.87□□□□□ -0.35
SCARF1-203ENST00000434376 Q6ZS92 163 aa12.87□□□□□ -0.35
SCARF1-203ENST00000434376 TCF23Q7RTU1 214 aa12.87□□□□□ -0.35
SCARF1-203ENST00000434376 PPP1R35Q8TAP8 253 aa12.87□□□□□ -0.35
SCARF1-203ENST00000434376 NOL4LQ96MY1 436 aaPredicted RBP12.87□□□□□ -0.35
SCARF1-203ENST00000434376 MRPS11P82912 194 aaKnown RBP12.87□□□□□ -0.35
SCARF1-203ENST00000434376 MIC13Q5XKP0 118 aa12.87□□□□□ -0.35
SCARF1-203ENST00000434376 TBX15Q96SF7 602 aa12.87□□□□□ -0.35
SCARF1-203ENST00000434376 TRAPPC1Q9Y5R8 145 aa12.87□□□□□ -0.35
SCARF1-203ENST00000434376 A8MXE2 369 aa12.86□□□□□ -0.35
SCARF1-203ENST00000434376 SRRM5B3KS81 715 aa12.86□□□□□ -0.35
SCARF1-203ENST00000434376 C16orf97H3BN30 126 aa12.86□□□□□ -0.35
SCARF1-203ENST00000434376 PLAUP00749 431 aa12.86□□□□□ -0.35
SCARF1-203ENST00000434376 CD81P60033 236 aa12.86□□□□□ -0.35
SCARF1-203ENST00000434376 DIAPH2-AS1Q14236 149 aa12.86□□□□□ -0.35
SCARF1-203ENST00000434376 PDLIM3Q53GG5 364 aaPredicted RBP12.86□□□□□ -0.35
SCARF1-203ENST00000434376 TIMM23BQ5SRD1 257 aa12.86□□□□□ -0.35
SCARF1-203ENST00000434376 Q6ZS49 121 aa12.86□□□□□ -0.35
SCARF1-203ENST00000434376 WDR61Q9GZS3 305 aaKnown RBP12.86□□□□□ -0.35
SCARF1-203ENST00000434376 RNF7Q9UBF6 113 aa12.86□□□□□ -0.35
SCARF1-203ENST00000434376 SPINK4O60575 86 aa12.86□□□□□ -0.35
SCARF1-203ENST00000434376 IGKV1-16P04430 117 aa12.86□□□□□ -0.35
SCARF1-203ENST00000434376 CCKARP32238 428 aa12.86□□□□□ -0.35
SCARF1-203ENST00000434376 RND2P52198 227 aa12.86□□□□□ -0.35
SCARF1-203ENST00000434376 SPACA3Q8IXA5 215 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms