RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 HNF1AP20823 631 aa9.72□□□□□ -0.85
CD44-209ENST00000433892 IL3RAP26951 378 aa9.72□□□□□ -0.85
CD44-209ENST00000433892 GPX4P36969 197 aaPredicted RBP9.72□□□□□ -0.85
CD44-209ENST00000433892 ARSJQ5FYB0 599 aaPredicted RBP9.72□□□□□ -0.85
CD44-209ENST00000433892 COA6Q5JTJ3 125 aaKnown RBP9.72□□□□□ -0.85
CD44-209ENST00000433892 OR4A47Q6IF82 309 aa9.72□□□□□ -0.85
CD44-209ENST00000433892 NPVFQ9HCQ7 196 aa9.72□□□□□ -0.85
CD44-209ENST00000433892 SEPSECSQ9HD40 501 aaKnown RBP9.72□□□□□ -0.85
CD44-209ENST00000433892 LSM4Q9Y4Z0 139 aaKnown RBP9.72□□□□□ -0.85
CD44-209ENST00000433892 AKAP13Q12802 2813 aa9.72□□□□□ -0.85
CD44-209ENST00000433892 KBTBD11-OT1A0A1B0GTJ5 212 aa9.71□□□□□ -0.85
CD44-209ENST00000433892 SCO2A0A1W2PP80 73 aa9.71□□□□□ -0.85
CD44-209ENST00000433892 F6UZH7 168 aa9.71□□□□□ -0.85
CD44-209ENST00000433892 CXorf1O96002 111 aa9.71□□□□□ -0.85
CD44-209ENST00000433892 TYMSP04818 313 aa9.71□□□□□ -0.85
CD44-209ENST00000433892 IL6RP08887 468 aaPredicted RBP9.71□□□□□ -0.85
CD44-209ENST00000433892 GZMBP10144 247 aa9.71□□□□□ -0.85
CD44-209ENST00000433892 GLRXP35754 106 aa9.71□□□□□ -0.85
CD44-209ENST00000433892 KIR2DS2P43631 304 aa9.71□□□□□ -0.85
CD44-209ENST00000433892 RAB7AP51149 207 aa9.71□□□□□ -0.85
CD44-209ENST00000433892 TIMM23BQ5SRD1 257 aa9.71□□□□□ -0.85
CD44-209ENST00000433892 DNLZQ5SXM8 178 aa9.71□□□□□ -0.85
CD44-209ENST00000433892 SPATA31B1PQ5VZV4 182 aa9.71□□□□□ -0.85
CD44-209ENST00000433892 LYG1Q8N1E2 194 aa9.71□□□□□ -0.85
CD44-209ENST00000433892 CISD2Q8N5K1 135 aaKnown RBP9.71□□□□□ -0.85
CD44-209ENST00000433892 LINC00469Q8N7U9 141 aa9.71□□□□□ -0.85
CD44-209ENST00000433892 ACY3Q96HD9 319 aa9.71□□□□□ -0.85
CD44-209ENST00000433892 HINT2Q9BX68 163 aa9.71□□□□□ -0.85
CD44-209ENST00000433892 PARD6AQ9NPB6 346 aa9.71□□□□□ -0.85
CD44-209ENST00000433892 BSNQ9UPA5 3926 aa9.71□□□□□ -0.86
CD44-209ENST00000433892 TRGV8A0A0C4DH27 118 aa9.71□□□□□ -0.86
CD44-209ENST00000433892 A0A0U1RQK1 487 aa9.71□□□□□ -0.86
CD44-209ENST00000433892 ZNF320A2RRD8 509 aa9.71□□□□□ -0.86
CD44-209ENST00000433892 DVL1O14640 695 aa9.71□□□□□ -0.86
CD44-209ENST00000433892 CD99P14209 185 aa9.71□□□□□ -0.86
CD44-209ENST00000433892 NPY1RP25929 384 aa9.71□□□□□ -0.86
CD44-209ENST00000433892 GNG10P50151 68 aa9.71□□□□□ -0.86
CD44-209ENST00000433892 JOSD1Q15040 202 aaPredicted RBP9.71□□□□□ -0.86
CD44-209ENST00000433892 UNQ6494/PRO21346Q6UXR6 183 aa9.71□□□□□ -0.86
CD44-209ENST00000433892 SLC24A4Q8NFF2 622 aa9.71□□□□□ -0.86
CD44-209ENST00000433892 FAM216AQ8WUB2 273 aa9.71□□□□□ -0.86
CD44-209ENST00000433892 SFRP2Q96HF1 295 aa9.71□□□□□ -0.86
CD44-209ENST00000433892 TMEM14BQ9NUH8 114 aa9.71□□□□□ -0.86
CD44-209ENST00000433892 YTHDF2Q9Y5A9 579 aaKnown RBP9.71□□□□□ -0.86
CD44-209ENST00000433892 FOXH1O75593 365 aa9.7□□□□□ -0.86
CD44-209ENST00000433892 CA2P00918 260 aa9.7□□□□□ -0.86
CD44-209ENST00000433892 PDLIM4P50479 330 aa9.7□□□□□ -0.86
CD44-209ENST00000433892 HSPE1P61604 102 aaKnown RBP9.7□□□□□ -0.86
CD44-209ENST00000433892 PKIAP61925 76 aa9.7□□□□□ -0.86
CD44-209ENST00000433892 LCN2P80188 198 aa9.7□□□□□ -0.86
CD44-209ENST00000433892 MRPS11P82912 194 aaKnown RBP9.7□□□□□ -0.86
CD44-209ENST00000433892 EFNB3Q15768 340 aa9.7□□□□□ -0.86
CD44-209ENST00000433892 TEPPQ6URK8 271 aa9.7□□□□□ -0.86
CD44-209ENST00000433892 ZADH2Q8N4Q0 377 aa9.7□□□□□ -0.86
CD44-209ENST00000433892 STPG3Q8N7X2 389 aa9.7□□□□□ -0.86
CD44-209ENST00000433892 OR5R1Q8NH85 324 aa9.7□□□□□ -0.86
CD44-209ENST00000433892 SGMS2Q8NHU3 365 aa9.7□□□□□ -0.86
CD44-209ENST00000433892 RNASEH2CQ8TDP1 164 aaKnown RBP9.7□□□□□ -0.86
CD44-209ENST00000433892 C14orf144Q96I85 54 aa9.7□□□□□ -0.86
CD44-209ENST00000433892 GCM1Q9NP62 436 aa9.7□□□□□ -0.86
CD44-209ENST00000433892 FAM215AQ9Y5M1 114 aa9.7□□□□□ -0.86
CD44-209ENST00000433892 ZNF292O60281 2723 aa9.7□□□□□ -0.86
CD44-209ENST00000433892 TRGV10A0A0A0MS01 117 aa9.7□□□□□ -0.86
CD44-209ENST00000433892 TSTD3H0UI37 97 aa9.7□□□□□ -0.86
CD44-209ENST00000433892 C22orf34Q6ZV56 151 aa9.7□□□□□ -0.86
CD44-209ENST00000433892 CCL13Q99616 98 aa9.7□□□□□ -0.86
CD44-209ENST00000433892 ENY2Q9NPA8 101 aa9.7□□□□□ -0.86
CD44-209ENST00000433892 IDI2-AS1Q9NZ38 188 aa9.7□□□□□ -0.86
CD44-209ENST00000433892 FOXA2Q9Y261 457 aaPredicted RBP9.7□□□□□ -0.86
CD44-209ENST00000433892 TNCP24821 2201 aa9.7□□□□□ -0.86
CD44-209ENST00000433892 IGLV3-9A0A075B6K5 115 aa9.69□□□□□ -0.86
CD44-209ENST00000433892 MMP23AO75900 390 aa9.69□□□□□ -0.86
CD44-209ENST00000433892 DDTP30046 118 aa9.69□□□□□ -0.86
CD44-209ENST00000433892 GCHFRP30047 84 aa9.69□□□□□ -0.86
CD44-209ENST00000433892 THBS3P49746 956 aa9.69□□□□□ -0.86
CD44-209ENST00000433892 TCF23Q7RTU1 214 aa9.69□□□□□ -0.86
CD44-209ENST00000433892 TMEM144Q7Z5S9 345 aa9.69□□□□□ -0.86
CD44-209ENST00000433892 OCC1Q8TAD7 63 aa9.69□□□□□ -0.86
CD44-209ENST00000433892 SNRNP40Q96DI7 357 aaKnown RBP9.69□□□□□ -0.86
CD44-209ENST00000433892 FAM122AQ96E09 287 aa9.69□□□□□ -0.86
CD44-209ENST00000433892 ZNRD1Q9P1U0 126 aa9.69□□□□□ -0.86
CD44-209ENST00000433892 RNF7Q9UBF6 113 aa9.69□□□□□ -0.86
CD44-209ENST00000433892 TRAPPC1Q9Y5R8 145 aa9.69□□□□□ -0.86
CD44-209ENST00000433892 DSCAML1Q8TD84 2053 aa9.69□□□□□ -0.86
CD44-209ENST00000433892 MDFIC2A0A1B0GVS7 189 aa9.68□□□□□ -0.86
CD44-209ENST00000433892 ITGB1BP1O14713 200 aa9.68□□□□□ -0.86
CD44-209ENST00000433892 IGFBP2P18065 325 aa9.68□□□□□ -0.86
CD44-209ENST00000433892 CNN1P51911 297 aaKnown RBP9.68□□□□□ -0.86
CD44-209ENST00000433892 RPL15P61313 204 aaKnown RBP9.68□□□□□ -0.86
CD44-209ENST00000433892 TNFAIP6P98066 277 aaPredicted RBP9.68□□□□□ -0.86
CD44-209ENST00000433892 FOXL1Q12952 345 aa9.68□□□□□ -0.86
CD44-209ENST00000433892 FAM216BQ8N7L0 139 aa9.68□□□□□ -0.86
CD44-209ENST00000433892 ZCCHC14Q8WYQ9 949 aaKnown RBP9.68□□□□□ -0.86
CD44-209ENST00000433892 WFIKKN1Q96NZ8 548 aa9.68□□□□□ -0.86
CD44-209ENST00000433892 OR51B2Q9Y5P1 312 aa9.68□□□□□ -0.86
CD44-209ENST00000433892 YLPM1P49750 1951 aaKnown RBP9.68□□□□□ -0.86
CD44-209ENST00000433892 ROS1P08922 2347 aa9.68□□□□□ -0.86
CD44-209ENST00000433892 A0A087X0M5 115 aa9.68□□□□□ -0.86
CD44-209ENST00000433892 A0A1B0GX30 115 aa9.68□□□□□ -0.86
CD44-209ENST00000433892 ZNF705GA8MUZ8 300 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms