RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 GZMHP20718 246 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 HIST1H1TP22492 207 aaPredicted RBP1.3□□□□□ -2.2
PTPN4-205ENST00000433888 RPL27AP46776 148 aaKnown RBP1.3□□□□□ -2.2
PTPN4-205ENST00000433888 CSN1S1P47710 185 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 SNRPD2P62316 118 aaKnown RBP1.3□□□□□ -2.2
PTPN4-205ENST00000433888 HBA1P69905 142 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 HOXC5Q00444 222 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 TAF9Q16594 264 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 BPIFA4PQ86YQ2 179 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 ZNF283Q8N7M2 679 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 OR52R1Q8NGF1 315 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 OR8B12Q8NGG6 310 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 ZNF675Q8TD23 568 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 GPR119Q8TDV5 335 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 TVP23CQ96ET8 276 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 TM2D3Q9BRN9 247 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 OR8D2Q9GZM6 311 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 WDR61Q9GZS3 305 aaKnown RBP1.3□□□□□ -2.2
PTPN4-205ENST00000433888 EFCAB1Q9HAE3 211 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 GID8Q9NWU2 228 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 TXNL4BQ9NX01 149 aaKnown RBP1.3□□□□□ -2.2
PTPN4-205ENST00000433888 IDI2-AS1Q9NZ38 188 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 CYSLTR1Q9Y271 337 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 TIMM22Q9Y584 194 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 NYNRINQ9P2P1 1898 aaKnown RBP1.3□□□□□ -2.2
PTPN4-205ENST00000433888 ABCC12Q96J65 1359 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 DOCK3Q8IZD9 2030 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 ARHGAP32A7KAX9 2087 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 TRAV26-2A0A0B4J265 109 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 A0A1B0GVG6 124 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 hADV38S2A0JD32 116 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 SIGLEC16A6NMB1 481 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 PLXNB1O43157 2135 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 GNRH2O43555 120 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 PSCAO43653 123 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 ZNF73O43830 326 aaPredicted RBP1.29□□□□□ -2.2
PTPN4-205ENST00000433888 PDE6DO43924 150 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 TTRP02766 147 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 PPBPP02775 128 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 ZNF728P0DKX0 622 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 RPL28P46779 137 aaKnown RBP1.29□□□□□ -2.2
PTPN4-205ENST00000433888 EIF2B2P49770 351 aaKnown RBP1.29□□□□□ -2.2
PTPN4-205ENST00000433888 RBM11P57052 281 aaKnown RBP1.29□□□□□ -2.2
PTPN4-205ENST00000433888 PSME3P61289 254 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 EDDM3AQ14507 147 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 TMED2Q15363 201 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 ZNF705AQ6ZN79 300 aaPredicted RBP1.29□□□□□ -2.2
PTPN4-205ENST00000433888 C1orf158Q8N1D5 194 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 ZNF676Q8N7Q3 588 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 OR4X2Q8NGF9 303 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 OR51A2Q8NGJ7 313 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 OR4X1Q8NH49 305 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 SLC25A40Q8TBP6 338 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 HOPXQ9BPY8 73 aaPredicted RBP1.29□□□□□ -2.2
PTPN4-205ENST00000433888 CMSS1Q9BQ75 279 aaKnown RBP1.29□□□□□ -2.2
PTPN4-205ENST00000433888 KIFC1Q9BW19 673 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 MND1Q9BWT6 205 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 TRIM4Q9C037 500 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 TLNRD1Q9H1K6 362 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 OPTCQ9UBM4 332 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 FUT9Q9Y231 359 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 UTP11Q9Y3A2 253 aaKnown RBP1.29□□□□□ -2.2
PTPN4-205ENST00000433888 ZBED9Q6R2W3 1325 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 SORL1Q92673 2214 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 SPATA31E1Q6ZUB1 1445 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 PCF11O94913 1555 aaKnown RBP1.29□□□□□ -2.2
PTPN4-205ENST00000433888 LTBP2Q14767 1821 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 SLX4Q8IY92 1834 aa1.29□□□□□ -2.2
PTPN4-205ENST00000433888 PTPRSQ13332 1948 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 GREB1Q4ZG55 1949 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 SCN9AQ15858 1988 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 HEATR5AQ86XA9 2040 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 hCG_1818297A0A087WSY0 165 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 IGHV3-15A0A0B4J1V0 119 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 A8MT66 165 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 H3BPC8 53 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 UBFD1O14562 309 aaKnown RBP1.28□□□□□ -2.2
PTPN4-205ENST00000433888 SULT1B1O43704 296 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 S1PR2O95136 353 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 SRP19P09132 144 aaKnown RBP1.28□□□□□ -2.2
PTPN4-205ENST00000433888 CCL5P13501 91 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 CBR1P16152 277 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 BLVRBP30043 206 aaPredicted RBP1.28□□□□□ -2.2
PTPN4-205ENST00000433888 PEBP1P30086 187 aaKnown RBP1.28□□□□□ -2.2
PTPN4-205ENST00000433888 CA5AP35218 305 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 XCL1P47992 114 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 FXYD7P58549 80 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 TAS2R20P59543 309 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 VBP1P61758 197 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 RELAQ04206 551 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 LIN52Q52LA3 116 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 TMEM97Q5BJF2 176 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.28□□□□□ -2.2
PTPN4-205ENST00000433888 AADACL3Q5VUY0 350 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 GLT8D1Q68CQ7 371 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 ZFAND6Q6FIF0 208 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 SMARCD3Q6STE5 483 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 Q6ZS49 121 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 TMPPEQ6ZT21 453 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 LRRC28Q86X40 367 aaPredicted RBP1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms