RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 A0A087WW49 117 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 TEX50A0A1B0GTY4 177 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 C13orf42A0A1B0GVH6 325 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 DISC1C4P0D8 188 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 UPK2O00526 184 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 CTDSPLO15194 276 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 TPPPO94811 219 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 CD74P04233 296 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 REG1AP05451 166 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 IL6RP08887 468 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 ZNF735P0CB33 412 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 NQO2P16083 231 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 S100GP29377 79 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 HOXD3P31249 432 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 RPL27AP46776 148 aaKnown RBP4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 CRIP2P52943 208 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 UCP3P55916 312 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 PIGPP57054 158 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 TAS2R31P59538 309 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 SRSF3P84103 164 aaKnown RBP4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 MSMO1Q15800 293 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 SP6Q3SY56 376 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 ZNF585BQ52M93 769 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 C19orf54Q5BKX5 351 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 CFAP161Q6P656 301 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 C19orf35Q6ZS72 473 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 SLC38A6Q8IZM9 456 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 TCTEX1D1Q8N7M0 179 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 LINC00482Q8N8I6 264 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 RNF152Q8N8N0 203 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 TERB2Q8NHR7 220 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 VSTM2AQ8TAG5 236 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 TMEM167AQ8TBQ9 72 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 SMIM4Q8WVI0 70 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 C4orf3Q8WVX3 66 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 TRIM63Q969Q1 353 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 P2RX4Q99571 388 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 AIFM2Q9BRQ8 373 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 HINT2Q9BX68 163 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 CDIP1Q9H305 208 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 TMEM140Q9NV12 185 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 MCUBQ9NWR8 336 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 ZNF580Q9UK33 172 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 S4R3C0 116 aa4.47□□□□□ -1.69
HMGB3P24-201ENST00000433260 C3orf85A0A1B0GTC6 90 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 LINC00854A0A1B0GVQ3 168 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 A0A1B0GW64 132 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 I3L521 148 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 PAX4O43316 350 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 CREBL2O60519 120 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 RBMXL2O75526 392 aaKnown RBP4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 OR2J3O76001 311 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 IGHV3-23P01764 117 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 OR9G9P0C7N8 305 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 AKAIN1P0CW23 69 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 AREGP15514 252 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 HLA-GP17693 338 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 MAS1LP35410 378 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 SLURP1P55000 103 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 ERVK-16P61578 105 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 RPL8P62917 257 aaKnown RBP4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 MRPS10P82664 201 aaKnown RBP4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 ZNF45Q02386 682 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 SSBP1Q04837 148 aaKnown RBP4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 ATP5G2Q06055 141 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 ZNF616Q08AN1 781 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 MEF2DQ14814 521 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 IZUMO4Q1ZYL8 232 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 BEAN1Q3B7T3 259 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 DEFB121Q5J5C9 76 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 MZT2BQ6NZ67 158 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 LHFPL1Q86WI0 220 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 ARRDC1Q8N5I2 433 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 TTC9CQ8N5M4 171 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 ARL6IP6Q8N6S5 226 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 OR10W1Q8NGF6 305 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 OR51S1Q8NGJ8 323 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 OR4C16Q8NGL9 310 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 OR13C8Q8NGS7 320 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 OR4A5Q8NH83 315 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 ZFAND1Q8TCF1 268 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 CD300LFQ8TDQ1 290 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 DCUN1D4Q92564 292 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 DLX4Q92988 240 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 TMEM68Q96MH6 324 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 SPIN2AQ99865 258 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 SPIN2BQ9BPZ2 258 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 SOSTQ9BQB4 213 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 COMMD5Q9GZQ3 224 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 SLA2Q9H6Q3 261 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 PLEKHA2Q9HB19 425 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 SLC2A9Q9NRM0 540 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 BET1LQ9NYM9 111 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 COPZ2Q9P299 210 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 RABL2AQ9UBK7 228 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 RABL2BQ9UNT1 228 aa4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 C14orf166Q9Y224 244 aaKnown RBP4.46□□□□□ -1.7
HMGB3P24-201ENST00000433260 A0A0G2JLM5 398 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 TEX13DA0A0J9YY54 714 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 ANKRD20A5PA0PJZ0 165 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms