RNA–Protein interactions for RNA: ENST00000433224.1

LRRTM1-206, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-206ENST00000433224 FAM90A18PA6NE21 464 aa10.48□□□□□ -0.73
LRRTM1-206ENST00000433224 FAM90A16PA6NEW6 464 aa10.48□□□□□ -0.73
LRRTM1-206ENST00000433224 FAM90A20PA6NIJ5 464 aa10.48□□□□□ -0.73
LRRTM1-206ENST00000433224 FAM90A8PA6NJQ4 464 aa10.48□□□□□ -0.73
LRRTM1-206ENST00000433224 FAM90A7PA6NKC0 464 aa10.48□□□□□ -0.73
LRRTM1-206ENST00000433224 FAM90A22PA8MWA6 464 aa10.48□□□□□ -0.73
LRRTM1-206ENST00000433224 FAM90A12PA8MX19 464 aa10.48□□□□□ -0.73
LRRTM1-206ENST00000433224 FAM90A5PA8MXJ8 464 aa10.48□□□□□ -0.73
LRRTM1-206ENST00000433224 FAM90A23PA8MXZ1 464 aa10.48□□□□□ -0.73
LRRTM1-206ENST00000433224 FAM90A15PP0C7V4 464 aa10.48□□□□□ -0.73
LRRTM1-206ENST00000433224 FAM90A13PP0C7W8 464 aa10.48□□□□□ -0.73
LRRTM1-206ENST00000433224 FAM90A14PP0C7W9 464 aa10.48□□□□□ -0.73
LRRTM1-206ENST00000433224 FAM90A24PP0C7X0 464 aa10.48□□□□□ -0.73
LRRTM1-206ENST00000433224 NPY1RP25929 384 aa10.48□□□□□ -0.73
LRRTM1-206ENST00000433224 SRSF4Q08170 494 aaKnown RBP10.48□□□□□ -0.73
LRRTM1-206ENST00000433224 ICAM4Q14773 271 aa10.48□□□□□ -0.73
LRRTM1-206ENST00000433224 PYY3Q5JQD4 70 aa10.48□□□□□ -0.73
LRRTM1-206ENST00000433224 MRPL54Q6P161 138 aaKnown RBP10.48□□□□□ -0.73
LRRTM1-206ENST00000433224 PARLQ9H300 379 aa10.48□□□□□ -0.73
LRRTM1-206ENST00000433224 TUBA4BQ9H853 241 aa10.48□□□□□ -0.73
LRRTM1-206ENST00000433224 VPS13AQ96RL7 3174 aa10.48□□□□□ -0.73
LRRTM1-206ENST00000433224 IQCF6A8MYZ5 107 aa10.48□□□□□ -0.73
LRRTM1-206ENST00000433224 AGAP20933 346 aa10.48□□□□□ -0.73
LRRTM1-206ENST00000433224 HNRNPA3P51991 378 aaKnown RBP10.48□□□□□ -0.73
LRRTM1-206ENST00000433224 HEPN1Q6WQI6 88 aa10.48□□□□□ -0.73
LRRTM1-206ENST00000433224 TMEM171Q8WVE6 324 aa10.48□□□□□ -0.73
LRRTM1-206ENST00000433224 ELOVL1Q9BW60 279 aa10.48□□□□□ -0.73
LRRTM1-206ENST00000433224 MANBALQ9NQG1 85 aa10.48□□□□□ -0.73
LRRTM1-206ENST00000433224 PAX5Q02548 391 aa10.47□□□□□ -0.73
LRRTM1-206ENST00000433224 Q6ZS92 163 aa10.47□□□□□ -0.73
LRRTM1-206ENST00000433224 A0A0G2JNJ9 132 aa10.47□□□□□ -0.73
LRRTM1-206ENST00000433224 UCP3P55916 312 aa10.47□□□□□ -0.73
LRRTM1-206ENST00000433224 ELOBQ15370 118 aa10.47□□□□□ -0.73
LRRTM1-206ENST00000433224 Q56UQ5 140 aa10.47□□□□□ -0.73
LRRTM1-206ENST00000433224 ZNF645Q8N7E2 425 aa10.47□□□□□ -0.73
LRRTM1-206ENST00000433224 TMEM106BQ9NUM4 274 aa10.47□□□□□ -0.73
LRRTM1-206ENST00000433224 Q9UFV3 132 aa10.47□□□□□ -0.73
LRRTM1-206ENST00000433224 ETV2O00321 342 aaPredicted RBP10.47□□□□□ -0.73
LRRTM1-206ENST00000433224 ZNF253O75346 499 aa10.47□□□□□ -0.73
LRRTM1-206ENST00000433224 UBE2G1P62253 170 aa10.47□□□□□ -0.73
LRRTM1-206ENST00000433224 OR5I1Q13606 314 aa10.47□□□□□ -0.73
LRRTM1-206ENST00000433224 VAMP3Q15836 100 aa10.47□□□□□ -0.73
LRRTM1-206ENST00000433224 TMEM183BQ1AE95 376 aa10.47□□□□□ -0.73
LRRTM1-206ENST00000433224 DNM1P46Q6ZS02 220 aa10.47□□□□□ -0.73
LRRTM1-206ENST00000433224 REC114Q7Z4M0 266 aa10.47□□□□□ -0.73
LRRTM1-206ENST00000433224 OR4P4Q8NGL7 312 aa10.47□□□□□ -0.73
LRRTM1-206ENST00000433224 CLDND2Q8NHS1 167 aa10.47□□□□□ -0.73
LRRTM1-206ENST00000433224 ANAPC16Q96DE5 110 aa10.47□□□□□ -0.73
LRRTM1-206ENST00000433224 DCAF16Q9NXF7 216 aa10.47□□□□□ -0.73
LRRTM1-206ENST00000433224 SNURFLB1AK76 121 aa10.46□□□□□ -0.73
LRRTM1-206ENST00000433224 CCKARP32238 428 aa10.46□□□□□ -0.73
LRRTM1-206ENST00000433224 CAMPP49913 170 aa10.46□□□□□ -0.73
LRRTM1-206ENST00000433224 ATP6V1FQ16864 119 aa10.46□□□□□ -0.73
LRRTM1-206ENST00000433224 TMEM140Q9NV12 185 aa10.46□□□□□ -0.73
LRRTM1-206ENST00000433224 S4R3C0 116 aa10.46□□□□□ -0.73
LRRTM1-206ENST00000433224 ARL2-SNX15V9GYD0 113 aa10.46□□□□□ -0.73
LRRTM1-206ENST00000433224 RAMP3O60896 148 aa10.46□□□□□ -0.73
LRRTM1-206ENST00000433224 GNG4P50150 75 aa10.46□□□□□ -0.73
LRRTM1-206ENST00000433224 LYZP61626 148 aa10.46□□□□□ -0.73
LRRTM1-206ENST00000433224 PLSCR4Q9NRQ2 329 aa10.46□□□□□ -0.73
LRRTM1-206ENST00000433224 HIF1ANQ9NWT6 349 aa10.46□□□□□ -0.73
LRRTM1-206ENST00000433224 OR51B2Q9Y5P1 312 aa10.46□□□□□ -0.73
LRRTM1-206ENST00000433224 CLEC3BP05452 202 aa10.46□□□□□ -0.74
LRRTM1-206ENST00000433224 C20orf204Q6ZNR8 217 aa10.46□□□□□ -0.74
LRRTM1-206ENST00000433224 PIP4P1Q86T03 277 aa10.46□□□□□ -0.74
LRRTM1-206ENST00000433224 FAM216AQ8WUB2 273 aa10.46□□□□□ -0.74
LRRTM1-206ENST00000433224 HSPB9Q9BQS6 159 aa10.46□□□□□ -0.74
LRRTM1-206ENST00000433224 SH2D2AQ9NP31 389 aa10.46□□□□□ -0.74
LRRTM1-206ENST00000433224 IL19Q9UHD0 177 aa10.46□□□□□ -0.74
LRRTM1-206ENST00000433224 PPIAL4CA0A0B4J2A2 164 aa10.45□□□□□ -0.74
LRRTM1-206ENST00000433224 C17orf100A8MU93 164 aa10.45□□□□□ -0.74
LRRTM1-206ENST00000433224 PPIAL4GP0DN37 164 aa10.45□□□□□ -0.74
LRRTM1-206ENST00000433224 C1orf162Q8NEQ5 155 aaPredicted RBP10.45□□□□□ -0.74
LRRTM1-206ENST00000433224 OR1B1Q8NGR6 318 aa10.45□□□□□ -0.74
LRRTM1-206ENST00000433224 MLNRO43193 412 aa10.45□□□□□ -0.74
LRRTM1-206ENST00000433224 UCP1P25874 307 aa10.45□□□□□ -0.74
LRRTM1-206ENST00000433224 SSX7Q7RTT5 188 aa10.45□□□□□ -0.74
LRRTM1-206ENST00000433224 PNKDQ8N490 385 aa10.45□□□□□ -0.74
LRRTM1-206ENST00000433224 ADTRPQ96IZ2 230 aa10.45□□□□□ -0.74
LRRTM1-206ENST00000433224 C18orf12Q96KH6 178 aa10.45□□□□□ -0.74
LRRTM1-206ENST00000433224 VSIRQ9H7M9 311 aa10.45□□□□□ -0.74
LRRTM1-206ENST00000433224 PPP1R14DQ9NXH3 145 aa10.45□□□□□ -0.74
LRRTM1-206ENST00000433224 JMJD1CQ15652 2540 aa10.45□□□□□ -0.74
LRRTM1-206ENST00000433224 SOD3P08294 240 aa10.45□□□□□ -0.74
LRRTM1-206ENST00000433224 FOLR2P14207 255 aa10.45□□□□□ -0.74
LRRTM1-206ENST00000433224 TAS2R45P59539 299 aa10.45□□□□□ -0.74
LRRTM1-206ENST00000433224 PSG5Q15238 335 aa10.45□□□□□ -0.74
LRRTM1-206ENST00000433224 ECSCRQ19T08 205 aa10.45□□□□□ -0.74
LRRTM1-206ENST00000433224 EAF1Q96JC9 268 aaPredicted RBP10.45□□□□□ -0.74
LRRTM1-206ENST00000433224 CHODLQ9H9P2 273 aa10.45□□□□□ -0.74
LRRTM1-206ENST00000433224 C20orf202A1L168 122 aa10.44□□□□□ -0.74
LRRTM1-206ENST00000433224 H3BTX0 84 aa10.44□□□□□ -0.74
LRRTM1-206ENST00000433224 HPRT1P00492 218 aa10.44□□□□□ -0.74
LRRTM1-206ENST00000433224 PRB4P10163 310 aaPredicted RBP10.44□□□□□ -0.74
LRRTM1-206ENST00000433224 KIAA1644Q3SXP7 199 aa10.44□□□□□ -0.74
LRRTM1-206ENST00000433224 RNASEKQ6P5S7 137 aaKnown RBP10.44□□□□□ -0.74
LRRTM1-206ENST00000433224 OR5AU1Q8NGC0 362 aa10.44□□□□□ -0.74
LRRTM1-206ENST00000433224 CORO2AQ92828 525 aa10.44□□□□□ -0.74
LRRTM1-206ENST00000433224 HIST1H1BP16401 226 aaKnown RBP10.44□□□□□ -0.74
LRRTM1-206ENST00000433224 APOBEC3AP31941 199 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms