RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 TMEM159Q96B96 161 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 CMBLQ96DG6 245 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 PRSS27Q9BQR3 290 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 ANAPC13Q9BS18 74 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 OR8D2Q9GZM6 311 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 CHST6Q9GZX3 395 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 GTSF1LQ9H1H1 148 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 EDA2RQ9HAV5 297 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 UBQLN4Q9NRR5 601 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 CYSLTR1Q9Y271 337 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 WASHC3Q9Y3C0 194 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 TECPR2O15040 1411 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 RALGAPA2Q2PPJ7 1873 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 MBD5Q9P267 1494 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 MAP3K1Q13233 1512 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 NUP205Q92621 2012 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 LRRIQ1Q96JM4 1722 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 hCG_1818297A0A087WSY0 165 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 IGKV1-8A0A0C4DH67 115 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 LINC00862A6NCI5 91 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 KNCNA6PVL3 124 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 A8MT66 165 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 AGPAT2O15120 278 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 SS18L1O75177 396 aaPredicted RBP1.77□□□□□ -2.13
CLK1-204ENST00000432425 NDUFC2O95298 119 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 CA2P00918 260 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 NRASP01111 189 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 HBZP02008 142 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 SOD3P08294 240 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 LINC00694P0DN24 101 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 EVI2AP22794 236 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 MYL9P24844 172 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 CXCL12P48061 93 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 ZNF138P52744 262 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 TAS2R46P59540 309 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 CDK6Q00534 326 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 MMDQ15546 238 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 ABCA11PQ4W5N1 156 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 Q5XG85 94 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 LCN12Q6JVE5 192 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 LCN8Q6JVE9 175 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 KRTAP5-7Q6L8G8 165 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 DNAJC24Q6P3W2 148 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 UGT2A3Q6UWM9 527 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 TCTEX1D1Q8N7M0 179 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 UBALD1Q8TB05 177 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 RXFP4Q8TDU9 374 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 CT55Q8WUE5 264 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 FRZBQ92765 325 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 SMIM8Q96KF7 97 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 IGF2BP2-AS1Q96M15 143 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 PRADC1Q9BSG0 188 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 PRO1933Q9H354 126 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 EFCAB1Q9HAE3 211 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 TAF9BQ9HBM6 251 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 KCNIP2Q9NS61 270 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 TVP23BQ9NYZ1 205 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 OR5AC2Q9NZP5 309 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 METTL1Q9UBP6 276 aaKnown RBP1.77□□□□□ -2.13
CLK1-204ENST00000432425 RPUSD1Q9UJJ7 312 aaKnown RBP1.77□□□□□ -2.13
CLK1-204ENST00000432425 SIGLEC7Q9Y286 467 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 MED31Q9Y3C7 131 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 F11RQ9Y624 299 aaKnown RBP1.77□□□□□ -2.13
CLK1-204ENST00000432425 PXMP4Q9Y6I8 212 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 HSPE1-MOB4S4R3N1 261 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 MED23Q9ULK4 1368 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 OVOS2A0A0G2JMS6 1433 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 KIAA1107Q9UPP5 1409 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 IFT140Q96RY7 1462 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 ARHGEF11O15085 1522 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 SYNJ1O43426 1573 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 SIGLEC1Q9BZZ2 1709 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 KIF13AQ9H1H9 1805 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 IGLV2-18A0A075B6J9 118 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 A0A0J9YXV3 536 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 A0A1B0GV50 99 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 DHRS12A0PJE2 317 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 C5orf49A4QMS7 147 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 RIIAD1A6NNX1 92 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 DNASE2O00115 360 aaPredicted RBP1.76□□□□□ -2.13
CLK1-204ENST00000432425 ANGPTL7O43827 346 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 SNAPC5O75971 98 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 MPC2O95563 127 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 HLA-DRB1P01911 266 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 MT-ND4LP03901 98 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 CSRP1P21291 193 aaKnown RBP1.76□□□□□ -2.13
CLK1-204ENST00000432425 BRS3P32247 399 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 PPP1CCP36873 323 aaKnown RBP1.76□□□□□ -2.13
CLK1-204ENST00000432425 CCL23P55773 120 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 GFERP55789 205 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 RBM11P57052 281 aaKnown RBP1.76□□□□□ -2.13
CLK1-204ENST00000432425 S100A10P60903 97 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 RPS21P63220 83 aaKnown RBP1.76□□□□□ -2.13
CLK1-204ENST00000432425 LAMTOR4Q0VGL1 99 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 CCL15Q16663 113 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 UBE2SQ16763 222 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 AVPI1Q5T686 147 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 GLT8D1Q68CQ7 371 aa1.76□□□□□ -2.13
CLK1-204ENST00000432425 GLYATQ6IB77 296 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms