RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 LINC01560Q8TB33 94 aa9.48□□□□□ -0.89
CLDN4-202ENST00000431918 OR9G9P0C7N8 305 aa9.48□□□□□ -0.89
CLDN4-202ENST00000431918 NPY1RP25929 384 aa9.48□□□□□ -0.89
CLDN4-202ENST00000431918 LRRC75BQ2VPJ9 315 aa9.48□□□□□ -0.89
CLDN4-202ENST00000431918 ZNF880Q6PDB4 577 aa9.48□□□□□ -0.89
CLDN4-202ENST00000431918 MRGPRGQ86SM5 289 aa9.48□□□□□ -0.89
CLDN4-202ENST00000431918 HARBI1Q96MB7 349 aa9.48□□□□□ -0.89
CLDN4-202ENST00000431918 GAL3ST2Q9H3Q3 398 aa9.48□□□□□ -0.89
CLDN4-202ENST00000431918 RNF115Q9Y4L5 304 aa9.48□□□□□ -0.89
CLDN4-202ENST00000431918 A0A1W2PRD5 423 aa9.48□□□□□ -0.89
CLDN4-202ENST00000431918 A0A1W2PRF3 423 aa9.48□□□□□ -0.89
CLDN4-202ENST00000431918 A0A1W2PRM7 423 aa9.48□□□□□ -0.89
CLDN4-202ENST00000431918 M0QZK8 103 aa9.48□□□□□ -0.89
CLDN4-202ENST00000431918 GGCTO75223 188 aaKnown RBP9.48□□□□□ -0.89
CLDN4-202ENST00000431918 SRP19P09132 144 aaKnown RBP9.48□□□□□ -0.89
CLDN4-202ENST00000431918 MIC13Q5XKP0 118 aa9.48□□□□□ -0.89
CLDN4-202ENST00000431918 C11orf42Q8N5U0 333 aa9.48□□□□□ -0.89
CLDN4-202ENST00000431918 ZNRD1Q9P1U0 126 aa9.48□□□□□ -0.89
CLDN4-202ENST00000431918 DSPP15924 2871 aaKnown RBP9.47□□□□□ -0.89
CLDN4-202ENST00000431918 HIST1H2BKO60814 126 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 HIST1H2BJP06899 126 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 CD3EP07766 207 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 HIST1H2BOP23527 126 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 DUTP33316 252 aaKnown RBP9.47□□□□□ -0.89
CLDN4-202ENST00000431918 HIST1H2BBP33778 126 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 CHRNA7P36544 502 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 HIST1H2BDP58876 126 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 HIST1H2BCP62807 126 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 HIST2H2BEQ16778 126 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.47□□□□□ -0.89
CLDN4-202ENST00000431918 HIST3H2BBQ8N257 126 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 HIST1H2BHQ93079 126 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 HIST1H2BNQ99877 126 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 HIST1H2BMQ99879 126 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 TCF19Q9Y242 345 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 A0A0G2JNJ9 132 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 CTXND1A0A1B0GTU2 59 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.47□□□□□ -0.89
CLDN4-202ENST00000431918 J3QR06 171 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 IGHV3-48P01763 117 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 TRGC1P0CF51 173 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 TIMP3P35625 211 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 MSMPQ1L6U9 139 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 IGFL2Q6UWQ7 119 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 ASCL5Q7RTU5 278 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 BEND2Q8NDZ0 799 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 DNAJC4Q9NNZ3 241 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 Q9UFV3 132 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 CCL21O00585 134 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 HSPB1P04792 205 aaKnown RBP9.47□□□□□ -0.89
CLDN4-202ENST00000431918 IQCJQ1A5X6 159 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 TMEM241Q24JQ0 296 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 TGIF2LYQ8IUE0 185 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 OR13D1Q8NGV5 346 aa9.47□□□□□ -0.89
CLDN4-202ENST00000431918 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.47□□□□□ -0.89
CLDN4-202ENST00000431918 TRAV3A0A0B4J244 114 aa9.46□□□□□ -0.89
CLDN4-202ENST00000431918 TM4SF5O14894 197 aa9.46□□□□□ -0.89
CLDN4-202ENST00000431918 THBS3P49746 956 aa9.46□□□□□ -0.89
CLDN4-202ENST00000431918 ICAM4Q14773 271 aa9.46□□□□□ -0.89
CLDN4-202ENST00000431918 MOB3BQ86TA1 216 aa9.46□□□□□ -0.89
CLDN4-202ENST00000431918 CLDND2Q8NHS1 167 aa9.46□□□□□ -0.89
CLDN4-202ENST00000431918 FAM210BQ96KR6 192 aa9.46□□□□□ -0.89
CLDN4-202ENST00000431918 IDI2-AS1Q9NZ38 188 aa9.46□□□□□ -0.89
CLDN4-202ENST00000431918 IL19Q9UHD0 177 aa9.46□□□□□ -0.89
CLDN4-202ENST00000431918 SAA2-SAA4A0A096LPE2 208 aa9.46□□□□□ -0.89
CLDN4-202ENST00000431918 C11orf94C9JXX5 98 aa9.46□□□□□ -0.89
CLDN4-202ENST00000431918 CLDN34H7C241 214 aa9.46□□□□□ -0.89
CLDN4-202ENST00000431918 IGLV1-44P01699 117 aa9.46□□□□□ -0.89
CLDN4-202ENST00000431918 SAA2P0DJI9 122 aaPredicted RBP9.46□□□□□ -0.89
CLDN4-202ENST00000431918 GCSAMLQ5JQS6 135 aa9.46□□□□□ -0.89
CLDN4-202ENST00000431918 FAM122AQ96E09 287 aa9.46□□□□□ -0.89
CLDN4-202ENST00000431918 KBTBD11-OT1A0A1B0GTJ5 212 aa9.46□□□□□ -0.9
CLDN4-202ENST00000431918 NPIPB11E5RHQ5 1161 aa9.46□□□□□ -0.9
CLDN4-202ENST00000431918 SLC35E3Q7Z769 313 aa9.46□□□□□ -0.9
CLDN4-202ENST00000431918 OR5R1Q8NH85 324 aa9.46□□□□□ -0.9
CLDN4-202ENST00000431918 SERTAD4Q9NUC0 356 aa9.46□□□□□ -0.9
CLDN4-202ENST00000431918 OR51B2Q9Y5P1 312 aa9.46□□□□□ -0.9
CLDN4-202ENST00000431918 CACNA1AO00555 2505 aa9.46□□□□□ -0.9
CLDN4-202ENST00000431918 TGIF2-C20orf24A0A0A6YYL0 155 aa9.46□□□□□ -0.9
CLDN4-202ENST00000431918 LYNX1G3V0Z9 82 aa9.46□□□□□ -0.9
CLDN4-202ENST00000431918 LYNX1P0DP58 116 aa9.46□□□□□ -0.9
CLDN4-202ENST00000431918 MYOD1P15172 320 aa9.46□□□□□ -0.9
CLDN4-202ENST00000431918 LMO1P25800 156 aa9.46□□□□□ -0.9
CLDN4-202ENST00000431918 ERHP84090 104 aaKnown RBP9.46□□□□□ -0.9
CLDN4-202ENST00000431918 MEF2BQ02080 365 aaPredicted RBP9.46□□□□□ -0.9
CLDN4-202ENST00000431918 PAX5Q02548 391 aa9.46□□□□□ -0.9
CLDN4-202ENST00000431918 RTP5Q14D33 572 aa9.46□□□□□ -0.9
CLDN4-202ENST00000431918 SLC24A4Q8NFF2 622 aa9.46□□□□□ -0.9
CLDN4-202ENST00000431918 PRR7Q8TB68 274 aa9.46□□□□□ -0.9
CLDN4-202ENST00000431918 ZNF714Q96N38 554 aa9.46□□□□□ -0.9
CLDN4-202ENST00000431918 HSPB7Q9UBY9 170 aa9.46□□□□□ -0.9
CLDN4-202ENST00000431918 LOC102723971A0A1B0GUV8 181 aa9.45□□□□□ -0.9
CLDN4-202ENST00000431918 KIR2DS2P43631 304 aa9.45□□□□□ -0.9
CLDN4-202ENST00000431918 FAM78BQ5VT40 261 aa9.45□□□□□ -0.9
CLDN4-202ENST00000431918 SPSB3Q6PJ21 355 aa9.45□□□□□ -0.9
CLDN4-202ENST00000431918 HEPN1Q6WQI6 88 aa9.45□□□□□ -0.9
CLDN4-202ENST00000431918 SLC35E1Q96K37 410 aa9.45□□□□□ -0.9
CLDN4-202ENST00000431918 DMDP11532 3685 aa9.45□□□□□ -0.9
CLDN4-202ENST00000431918 IFITM10A6NMD0 228 aa9.45□□□□□ -0.9
CLDN4-202ENST00000431918 C17orf100A8MU93 164 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms