RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 TCRAP04437 139 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 IGF1P05019 195 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 ELANEP08246 267 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 FSTP19883 344 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 FKBP2P26885 142 aaKnown RBP4.47□□□□□ -1.69
PTPN4-203ENST00000430976 ADMP35318 185 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 ZNF136P52737 540 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 RTL8BQ17RB0 113 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 FAM201AQ5SY85 155 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 AMTNQ6UX39 209 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 CLDN19Q8N6F1 224 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 SUMF1Q8NBK3 374 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 TMEM170AQ8WVE7 144 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 FXYD5Q96DB9 178 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 VKORC1Q9BQB6 163 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 RTL8AQ9BWD3 113 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 DISP2A7MBM2 1401 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 NALCNQ8IZF0 1738 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 SCN9AQ15858 1988 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 SAA2-SAA4A0A096LPE2 208 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 RRHO14718 337 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 SOCS1O15524 211 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 PSPNO60542 156 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 CELA2BP08218 269 aaPredicted RBP4.47□□□□□ -1.69
PTPN4-203ENST00000430976 SEC11BP0C7V7 166 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 GATA2P23769 480 aaPredicted RBP4.47□□□□□ -1.69
PTPN4-203ENST00000430976 SAA4P35542 130 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 PPICP45877 212 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 LOXL3P58215 753 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 TIAL1Q01085 375 aaKnown RBP eCLIP4.47□□□□□ -1.69
PTPN4-203ENST00000430976 DIAPH2-AS1Q14236 149 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 VAX1Q5SQQ9 334 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 NMNAT3Q96T66 252 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 SMIM7Q9BQ49 75 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 ZNF286AQ9HBT8 521 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 ADGRB3O60242 1522 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 ATRNO75882 1429 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 ADGRB2O60241 1585 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 ABCA3Q99758 1704 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 TLCD2A6NGC4 264 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 TMEM250H0YL14 139 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 KLRB1Q12918 225 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 FOXC1Q12948 553 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 VGLL1Q99990 258 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 TMEM70Q9BUB7 260 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 OTORQ9NRC9 128 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 MAP2P11137 1827 aaKnown RBP4.47□□□□□ -1.69
PTPN4-203ENST00000430976 DNAJC13O75165 2243 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 UNC13CQ8NB66 2214 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 TRAV14DV4A0A0A6YYC5 116 aa4.46□□□□□ -1.69
PTPN4-203ENST00000430976 KBTBD11O94819 623 aa4.46□□□□□ -1.69
PTPN4-203ENST00000430976 SCGB1C2P0DMR2 95 aa4.46□□□□□ -1.69
PTPN4-203ENST00000430976 ZNF85Q03923 595 aa4.46□□□□□ -1.69
PTPN4-203ENST00000430976 TEX36Q5VZQ5 186 aa4.46□□□□□ -1.69
PTPN4-203ENST00000430976 PLAC1Q9HBJ0 212 aa4.46□□□□□ -1.69
PTPN4-203ENST00000430976 TRAV27A0A087WT01 109 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 C17orf112F2Z3M2 114 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 PAX4O43316 350 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 PFN3P60673 137 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 PRR20EP86478 221 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 PRR20CP86479 221 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 PRR20DP86480 221 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 PRR20BP86481 221 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 PRR20AP86496 221 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 RBM3P98179 157 aaKnown RBP4.46□□□□□ -1.7
PTPN4-203ENST00000430976 CIRBPQ14011 172 aaKnown RBP4.46□□□□□ -1.7
PTPN4-203ENST00000430976 ZNF141Q15928 474 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 RASL10AQ92737 203 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 MAL2Q969L2 176 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 MS4A6EQ96DS6 147 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 MYEOVQ96EZ4 313 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 ZNF503Q96F45 646 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 MDFIQ99750 246 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 TMEM191AQ9H0A3 160 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 OR2W1Q9Y3N9 320 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 DOCK11Q5JSL3 2073 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 UTRNP46939 3433 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 IGLV3-22A0A075B6J6 115 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 IGHV5-51A0A0C4DH38 117 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 RNF222A6NCQ9 220 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 H3BRM9 83 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 J3QLW9 94 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 CCL22O00626 93 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 WISP1O95388 367 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 HSPB1P04792 205 aaKnown RBP4.46□□□□□ -1.7
PTPN4-203ENST00000430976 ATP1B1P05026 303 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 EDNRAP25101 427 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 CNTFRP26992 372 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 ABCA11PQ4W5N1 156 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 FAM19A2Q8N3H0 131 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 LINC00482Q8N8I6 264 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 CNRIP1Q96F85 164 aaPredicted RBP4.46□□□□□ -1.7
PTPN4-203ENST00000430976 AMELYQ99218 206 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 TAF1P21675 1872 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 TMEM131LA2VDJ0 1609 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 TNS3Q68CZ2 1445 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 CRYBG1Q9Y4K1 1723 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 CEBPZOSA8MTT3 80 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 F5H697 171 aa4.46□□□□□ -1.7
PTPN4-203ENST00000430976 TNFRSF13BO14836 293 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms