RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 TOX4O94842 621 aa10.37□□□□□ -0.75
CDH3-202ENST00000429102 SPCS3P61009 180 aa10.37□□□□□ -0.75
CDH3-202ENST00000429102 TREML4Q6UXN2 200 aa10.37□□□□□ -0.75
CDH3-202ENST00000429102 ZCCHC24Q8N2G6 241 aaKnown RBP10.37□□□□□ -0.75
CDH3-202ENST00000429102 CDX2Q99626 313 aaPredicted RBP10.37□□□□□ -0.75
CDH3-202ENST00000429102 AHRRA9YTQ3 701 aa10.36□□□□□ -0.75
CDH3-202ENST00000429102 IGFBP2P18065 325 aa10.36□□□□□ -0.75
CDH3-202ENST00000429102 PRDX2P32119 198 aa10.36□□□□□ -0.75
CDH3-202ENST00000429102 AMTP48728 403 aa10.36□□□□□ -0.75
CDH3-202ENST00000429102 ACTL10Q5JWF8 245 aa10.36□□□□□ -0.75
CDH3-202ENST00000429102 MOGAT3Q86VF5 341 aa10.36□□□□□ -0.75
CDH3-202ENST00000429102 MRPL18Q9H0U6 180 aaKnown RBP10.36□□□□□ -0.75
CDH3-202ENST00000429102 OPN3Q9H1Y3 402 aaPredicted RBP10.36□□□□□ -0.75
CDH3-202ENST00000429102 HCFC1P51610 2035 aa10.36□□□□□ -0.75
CDH3-202ENST00000429102 SVEP1Q4LDE5 3571 aa10.36□□□□□ -0.75
CDH3-202ENST00000429102 NAV3Q8IVL0 2385 aa10.36□□□□□ -0.75
CDH3-202ENST00000429102 TECTAO75443 2155 aa10.36□□□□□ -0.75
CDH3-202ENST00000429102 ZNF134P52741 427 aa10.36□□□□□ -0.75
CDH3-202ENST00000429102 KRTCAP3Q53RY4 240 aa10.36□□□□□ -0.75
CDH3-202ENST00000429102 WDR82Q6UXN9 313 aa10.36□□□□□ -0.75
CDH3-202ENST00000429102 PQLC2Q6ZP29 291 aa10.36□□□□□ -0.75
CDH3-202ENST00000429102 Q6ZVH6 145 aa10.36□□□□□ -0.75
CDH3-202ENST00000429102 MIR17HGQ75NE6 70 aa10.36□□□□□ -0.75
CDH3-202ENST00000429102 C1orf210Q8IVY1 113 aa10.36□□□□□ -0.75
CDH3-202ENST00000429102 GBGT1Q8N5D6 347 aa10.36□□□□□ -0.75
CDH3-202ENST00000429102 CD177Q8N6Q3 437 aa10.36□□□□□ -0.75
CDH3-202ENST00000429102 LINC00479Q96M42 142 aa10.36□□□□□ -0.75
CDH3-202ENST00000429102 ADAMTS20P59510 1910 aa10.36□□□□□ -0.75
CDH3-202ENST00000429102 IGHV3-21A0A0B4J1V1 117 aa10.35□□□□□ -0.75
CDH3-202ENST00000429102 PMS2P5A8MQ11 134 aa10.35□□□□□ -0.75
CDH3-202ENST00000429102 H3BTX0 84 aa10.35□□□□□ -0.75
CDH3-202ENST00000429102 PROP1O75360 226 aa10.35□□□□□ -0.75
CDH3-202ENST00000429102 HPRT1P00492 218 aa10.35□□□□□ -0.75
CDH3-202ENST00000429102 TCTAP57738 103 aa10.35□□□□□ -0.75
CDH3-202ENST00000429102 SUMO1P63165 101 aaKnown RBP10.35□□□□□ -0.75
CDH3-202ENST00000429102 ACP7Q6ZNF0 438 aa10.35□□□□□ -0.75
CDH3-202ENST00000429102 OR5R1Q8NH85 324 aa10.35□□□□□ -0.75
CDH3-202ENST00000429102 ACY3Q96HD9 319 aa10.35□□□□□ -0.75
CDH3-202ENST00000429102 MGST2Q99735 147 aa10.35□□□□□ -0.75
CDH3-202ENST00000429102 SH3BGRL2Q9UJC5 107 aa10.35□□□□□ -0.75
CDH3-202ENST00000429102 LNP1A1A4G5 178 aa10.35□□□□□ -0.75
CDH3-202ENST00000429102 Q8IYB0 196 aa10.35□□□□□ -0.75
CDH3-202ENST00000429102 CISD2Q8N5K1 135 aaKnown RBP10.35□□□□□ -0.75
CDH3-202ENST00000429102 SIGLECL1Q8N7X8 197 aa10.35□□□□□ -0.75
CDH3-202ENST00000429102 CIB3Q96Q77 187 aaPredicted RBP10.35□□□□□ -0.75
CDH3-202ENST00000429102 MBNL3Q9NUK0 354 aaKnown RBP10.35□□□□□ -0.75
CDH3-202ENST00000429102 TMEM140Q9NV12 185 aa10.35□□□□□ -0.75
CDH3-202ENST00000429102 CLCF1Q9UBD9 225 aa10.35□□□□□ -0.75
CDH3-202ENST00000429102 KLF13Q9Y2Y9 288 aaPredicted RBP10.35□□□□□ -0.75
CDH3-202ENST00000429102 NPSP0C0P6 89 aa10.35□□□□□ -0.75
CDH3-202ENST00000429102 COX5BP10606 129 aa10.35□□□□□ -0.75
CDH3-202ENST00000429102 NUTF2P61970 127 aaKnown RBP10.35□□□□□ -0.75
CDH3-202ENST00000429102 ZNF146Q15072 292 aa10.35□□□□□ -0.75
CDH3-202ENST00000429102 LINC00596Q86U02 117 aa10.35□□□□□ -0.75
CDH3-202ENST00000429102 UHRF2Q96PU4 802 aa10.35□□□□□ -0.75
CDH3-202ENST00000429102 TAAR6Q96RI8 345 aa10.35□□□□□ -0.75
CDH3-202ENST00000429102 GOLT1BQ9Y3E0 138 aa10.35□□□□□ -0.75
CDH3-202ENST00000429102 GCGP01275 180 aa10.34□□□□□ -0.75
CDH3-202ENST00000429102 IRF2P14316 349 aa10.34□□□□□ -0.75
CDH3-202ENST00000429102 ATP6V1FQ16864 119 aa10.34□□□□□ -0.75
CDH3-202ENST00000429102 MRPL37Q9BZE1 423 aaKnown RBP10.34□□□□□ -0.75
CDH3-202ENST00000429102 M0R1B8 84 aa10.34□□□□□ -0.75
CDH3-202ENST00000429102 CECR9P0C854 216 aa10.34□□□□□ -0.75
CDH3-202ENST00000429102 ERVK11-1P61568 191 aa10.34□□□□□ -0.75
CDH3-202ENST00000429102 ELOVL5Q9NYP7 299 aa10.34□□□□□ -0.75
CDH3-202ENST00000429102 RAB29O14966 203 aa10.34□□□□□ -0.75
CDH3-202ENST00000429102 SRSF7Q16629 238 aaKnown RBP eCLIP10.34□□□□□ -0.75
CDH3-202ENST00000429102 STPG3Q8N7X2 389 aa10.34□□□□□ -0.75
CDH3-202ENST00000429102 Q8TCH9 128 aa10.34□□□□□ -0.75
CDH3-202ENST00000429102 NOL4LQ96MY1 436 aaPredicted RBP10.34□□□□□ -0.75
CDH3-202ENST00000429102 IL6RP08887 468 aaPredicted RBP10.33□□□□□ -0.76
CDH3-202ENST00000429102 TNFSF10P50591 281 aa10.33□□□□□ -0.76
CDH3-202ENST00000429102 C1orf229Q6ZS94 237 aaPredicted RBP10.33□□□□□ -0.76
CDH3-202ENST00000429102 Q6ZWC4 215 aa10.33□□□□□ -0.76
CDH3-202ENST00000429102 TGIF2LYQ8IUE0 185 aa10.33□□□□□ -0.76
CDH3-202ENST00000429102 TCF19Q9Y242 345 aa10.33□□□□□ -0.76
CDH3-202ENST00000429102 CEP295Q9C0D2 2601 aa10.33□□□□□ -0.76
CDH3-202ENST00000429102 GGCTO75223 188 aaKnown RBP10.33□□□□□ -0.76
CDH3-202ENST00000429102 SMIM21Q3B7S5 101 aa10.33□□□□□ -0.76
CDH3-202ENST00000429102 C11orf53Q8IXP5 236 aa10.33□□□□□ -0.76
CDH3-202ENST00000429102 GGTLC1Q9BX51 225 aa10.33□□□□□ -0.76
CDH3-202ENST00000429102 RNF24Q9Y225 148 aa10.33□□□□□ -0.76
CDH3-202ENST00000429102 WDR83OSQ9Y284 106 aa10.33□□□□□ -0.76
CDH3-202ENST00000429102 WIPI2Q9Y4P8 454 aa10.33□□□□□ -0.76
CDH3-202ENST00000429102 APC2O95996 2303 aa10.33□□□□□ -0.76
CDH3-202ENST00000429102 TRBV6-6A0A0A6YYG2 114 aa10.33□□□□□ -0.76
CDH3-202ENST00000429102 TRAV5A0A0B4J249 113 aa10.33□□□□□ -0.76
CDH3-202ENST00000429102 CA2P00918 260 aa10.33□□□□□ -0.76
CDH3-202ENST00000429102 DUTP33316 252 aaKnown RBP10.33□□□□□ -0.76
CDH3-202ENST00000429102 CAMPP49913 170 aa10.33□□□□□ -0.76
CDH3-202ENST00000429102 DCAF16Q9NXF7 216 aa10.33□□□□□ -0.76
CDH3-202ENST00000429102 FAM90A26D6RGX4 464 aa10.32□□□□□ -0.76
CDH3-202ENST00000429102 K7EN84 100 aa10.32□□□□□ -0.76
CDH3-202ENST00000429102 SRP14P37108 136 aaKnown RBP10.32□□□□□ -0.76
CDH3-202ENST00000429102 HINT1P49773 126 aaPredicted RBP10.32□□□□□ -0.76
CDH3-202ENST00000429102 TPPP2P59282 170 aa10.32□□□□□ -0.76
CDH3-202ENST00000429102 ETFRF1Q6IPR1 90 aa10.32□□□□□ -0.76
CDH3-202ENST00000429102 ST6GALNAC6Q969X2 333 aa10.32□□□□□ -0.76
CDH3-202ENST00000429102 MAP1AP78559 2803 aaPredicted RBP10.32□□□□□ -0.76
CDH3-202ENST00000429102 A8MXE2 369 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms