RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 ARL6Q9H0F7 186 aa10.19□□□□□ -0.78
HMGB3P4-201ENST00000428776 ZC4H2Q9NQZ6 224 aa10.19□□□□□ -0.78
HMGB3P4-201ENST00000428776 NUP50Q9UKX7 468 aa10.19□□□□□ -0.78
HMGB3P4-201ENST00000428776 SIGLEC9Q9Y336 463 aa10.19□□□□□ -0.78
HMGB3P4-201ENST00000428776 FAM96BQ9Y3D0 163 aa10.19□□□□□ -0.78
HMGB3P4-201ENST00000428776 BOLA1Q9Y3E2 137 aa10.19□□□□□ -0.78
HMGB3P4-201ENST00000428776 OR51B2Q9Y5P1 312 aa10.19□□□□□ -0.78
HMGB3P4-201ENST00000428776 VPS13CQ709C8 3753 aa10.19□□□□□ -0.78
HMGB3P4-201ENST00000428776 PLXNB1O43157 2135 aa10.18□□□□□ -0.78
HMGB3P4-201ENST00000428776 A0A0U1RQK1 487 aa10.18□□□□□ -0.78
HMGB3P4-201ENST00000428776 TEX50A0A1B0GTY4 177 aa10.18□□□□□ -0.78
HMGB3P4-201ENST00000428776 MSGN1A6NI15 193 aa10.18□□□□□ -0.78
HMGB3P4-201ENST00000428776 RRHO14718 337 aa10.18□□□□□ -0.78
HMGB3P4-201ENST00000428776 SMAD7O15105 426 aaKnown RBP10.18□□□□□ -0.78
HMGB3P4-201ENST00000428776 NBR2O15453 112 aa10.18□□□□□ -0.78
HMGB3P4-201ENST00000428776 TSC22D2O75157 780 aa10.18□□□□□ -0.78
HMGB3P4-201ENST00000428776 CNTFRP26992 372 aa10.18□□□□□ -0.78
HMGB3P4-201ENST00000428776 CAV2P51636 162 aa10.18□□□□□ -0.78
HMGB3P4-201ENST00000428776 HNF4GQ14541 408 aa10.18□□□□□ -0.78
HMGB3P4-201ENST00000428776 OPCMLQ14982 345 aa10.18□□□□□ -0.78
HMGB3P4-201ENST00000428776 PPP1R27Q86WC6 154 aa10.18□□□□□ -0.78
HMGB3P4-201ENST00000428776 MMD2Q8IY49 270 aa10.18□□□□□ -0.78
HMGB3P4-201ENST00000428776 TEX29Q8N6K0 151 aa10.18□□□□□ -0.78
HMGB3P4-201ENST00000428776 OR8H1Q8NGG4 311 aa10.18□□□□□ -0.78
HMGB3P4-201ENST00000428776 NANPQ8TBE9 248 aa10.18□□□□□ -0.78
HMGB3P4-201ENST00000428776 CLCC1Q96S66 551 aa10.18□□□□□ -0.78
HMGB3P4-201ENST00000428776 COMMD5Q9GZQ3 224 aa10.18□□□□□ -0.78
HMGB3P4-201ENST00000428776 ZNF430Q9H8G1 570 aaPredicted RBP10.18□□□□□ -0.78
HMGB3P4-201ENST00000428776 PSENENQ9NZ42 101 aa10.18□□□□□ -0.78
HMGB3P4-201ENST00000428776 KIAA1456Q9P272 454 aa10.18□□□□□ -0.78
HMGB3P4-201ENST00000428776 METTL1Q9UBP6 276 aaKnown RBP10.18□□□□□ -0.78
HMGB3P4-201ENST00000428776 TCF19Q9Y242 345 aa10.18□□□□□ -0.78
HMGB3P4-201ENST00000428776 KANTRA0A1W2PQU2 76 aa10.17□□□□□ -0.78
HMGB3P4-201ENST00000428776 FAM24AA6NFZ4 105 aa10.17□□□□□ -0.78
HMGB3P4-201ENST00000428776 NDUFA3O95167 84 aa10.17□□□□□ -0.78
HMGB3P4-201ENST00000428776 FSHBP01225 129 aa10.17□□□□□ -0.78
HMGB3P4-201ENST00000428776 FBP1P09467 338 aa10.17□□□□□ -0.78
HMGB3P4-201ENST00000428776 IAPPP10997 89 aa10.17□□□□□ -0.78
HMGB3P4-201ENST00000428776 TMEM11P17152 192 aa10.17□□□□□ -0.78
HMGB3P4-201ENST00000428776 CD24P25063 80 aa10.17□□□□□ -0.78
HMGB3P4-201ENST00000428776 F2RL1P55085 397 aa10.17□□□□□ -0.78
HMGB3P4-201ENST00000428776 PRCDQ00LT1 54 aa10.17□□□□□ -0.78
HMGB3P4-201ENST00000428776 MMDQ15546 238 aa10.17□□□□□ -0.78
HMGB3P4-201ENST00000428776 PRSS8Q16651 343 aa10.17□□□□□ -0.78
HMGB3P4-201ENST00000428776 MRGPRG-AS1Q2M3A8 158 aa10.17□□□□□ -0.78
HMGB3P4-201ENST00000428776 TMEM252Q8N6L7 170 aa10.17□□□□□ -0.78
HMGB3P4-201ENST00000428776 OR1L8Q8NGR8 309 aa10.17□□□□□ -0.78
HMGB3P4-201ENST00000428776 ZDHHC16Q969W1 377 aa10.17□□□□□ -0.78
HMGB3P4-201ENST00000428776 GON7Q9BXV9 100 aa10.17□□□□□ -0.78
HMGB3P4-201ENST00000428776 HIPK2Q9H2X6 1198 aa10.17□□□□□ -0.78
HMGB3P4-201ENST00000428776 HEYLQ9NQ87 328 aaPredicted RBP10.17□□□□□ -0.78
HMGB3P4-201ENST00000428776 C1RLQ9NZP8 487 aa10.17□□□□□ -0.78
HMGB3P4-201ENST00000428776 CSPG4Q6UVK1 2322 aa10.17□□□□□ -0.78
HMGB3P4-201ENST00000428776 IGSF23A1L1A6 192 aa10.16□□□□□ -0.78
HMGB3P4-201ENST00000428776 TAAR5O14804 337 aa10.16□□□□□ -0.78
HMGB3P4-201ENST00000428776 BCL2L11O43521 198 aa10.16□□□□□ -0.78
HMGB3P4-201ENST00000428776 ACTL6BO94805 426 aa10.16□□□□□ -0.78
HMGB3P4-201ENST00000428776 VDAC2P45880 294 aaPredicted RBP10.16□□□□□ -0.78
HMGB3P4-201ENST00000428776 RPP30P78346 268 aaKnown RBP10.16□□□□□ -0.78
HMGB3P4-201ENST00000428776 EWSR1Q01844 656 aaKnown RBP eCLIP10.16□□□□□ -0.78
HMGB3P4-201ENST00000428776 BAXQ07812 192 aa10.16□□□□□ -0.78
HMGB3P4-201ENST00000428776 PJVKQ0ZLH3 352 aa10.16□□□□□ -0.78
HMGB3P4-201ENST00000428776 PLGLAQ15195 96 aa10.16□□□□□ -0.78
HMGB3P4-201ENST00000428776 AANATQ16613 207 aa10.16□□□□□ -0.78
HMGB3P4-201ENST00000428776 FAM120AOSQ5T036 256 aa10.16□□□□□ -0.78
HMGB3P4-201ENST00000428776 ARPC5LQ9BPX5 153 aa10.16□□□□□ -0.78
HMGB3P4-201ENST00000428776 FBXL15Q9H469 300 aa10.16□□□□□ -0.78
HMGB3P4-201ENST00000428776 ENY2Q9NPA8 101 aa10.16□□□□□ -0.78
HMGB3P4-201ENST00000428776 TPSG1Q9NRR2 321 aa10.16□□□□□ -0.78
HMGB3P4-201ENST00000428776 NDUFA4L2Q9NRX3 87 aa10.16□□□□□ -0.78
HMGB3P4-201ENST00000428776 ITGB1BP2Q9UKP3 347 aa10.16□□□□□ -0.78
HMGB3P4-201ENST00000428776 STRAPQ9Y3F4 350 aaKnown RBP10.16□□□□□ -0.78
HMGB3P4-201ENST00000428776 MYO9AB2RTY4 2548 aa10.16□□□□□ -0.78
HMGB3P4-201ENST00000428776 MXRA5Q9NR99 2828 aa10.15□□□□□ -0.78
HMGB3P4-201ENST00000428776 NBPF19A0A087WUL8 3843 aa10.15□□□□□ -0.78
HMGB3P4-201ENST00000428776 INS-IGF2F8WCM5 200 aa10.15□□□□□ -0.78
HMGB3P4-201ENST00000428776 SCAF4O95104 1147 aaKnown RBP10.15□□□□□ -0.78
HMGB3P4-201ENST00000428776 MYOD1P15172 320 aa10.15□□□□□ -0.78
HMGB3P4-201ENST00000428776 HOXA1P49639 335 aaPredicted RBP10.15□□□□□ -0.78
HMGB3P4-201ENST00000428776 SULT1A1P50225 295 aa10.15□□□□□ -0.78
HMGB3P4-201ENST00000428776 NHLH2Q02577 135 aa10.15□□□□□ -0.78
HMGB3P4-201ENST00000428776 C5orf64Q2M2E5 130 aa10.15□□□□□ -0.78
HMGB3P4-201ENST00000428776 LRRC75BQ2VPJ9 315 aa10.15□□□□□ -0.78
HMGB3P4-201ENST00000428776 SPINK9Q5DT21 86 aa10.15□□□□□ -0.78
HMGB3P4-201ENST00000428776 SPANXN5Q5MJ07 72 aa10.15□□□□□ -0.78
HMGB3P4-201ENST00000428776 C9orf139Q6ZV77 190 aa10.15□□□□□ -0.78
HMGB3P4-201ENST00000428776 STX12Q86Y82 276 aa10.15□□□□□ -0.78
HMGB3P4-201ENST00000428776 HINT2Q9BX68 163 aa10.15□□□□□ -0.78
HMGB3P4-201ENST00000428776 SLA2Q9H6Q3 261 aa10.15□□□□□ -0.78
HMGB3P4-201ENST00000428776 PLEKHA3Q9HB20 300 aa10.15□□□□□ -0.78
HMGB3P4-201ENST00000428776 A0A1W2PN81 502 aa10.14□□□□□ -0.79
HMGB3P4-201ENST00000428776 NCBP2LA6PVI3 153 aaKnown RBP10.14□□□□□ -0.79
HMGB3P4-201ENST00000428776 H3BP45 60 aa10.14□□□□□ -0.79
HMGB3P4-201ENST00000428776 CD5LO43866 347 aa10.14□□□□□ -0.79
HMGB3P4-201ENST00000428776 OPN1MWP04001 364 aa10.14□□□□□ -0.79
HMGB3P4-201ENST00000428776 OPN1MW2P0DN77 364 aa10.14□□□□□ -0.79
HMGB3P4-201ENST00000428776 OPN1MW3P0DN78 364 aa10.14□□□□□ -0.79
HMGB3P4-201ENST00000428776 CHRNA7P36544 502 aa10.14□□□□□ -0.79
HMGB3P4-201ENST00000428776 COMPP49747 757 aaPredicted RBP10.14□□□□□ -0.79
HMGB3P4-201ENST00000428776 ATP5IP56385 69 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms