RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 TNFRSF9Q07011 255 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 SELENOHQ8IZQ5 122 aaKnown RBP7.62□□□□□ -1.19
CTNND1-208ENST00000428599 OR11H1Q8NG94 326 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 OR11H2Q8NH07 326 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 NPIPB3Q92617 1050 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 GPR146Q96CH1 333 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 MRPL18Q9H0U6 180 aaKnown RBP7.62□□□□□ -1.19
CTNND1-208ENST00000428599 TCRBV4S1A1TA0A5B7 111 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 NPIPB4C9JG80 1138 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 H3BTX0 84 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 SMIM10L1P0DMW3 83 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 PHLDA1Q8WV24 401 aaPredicted RBP7.61□□□□□ -1.19
CTNND1-208ENST00000428599 ARPC1AQ92747 370 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 SMIM10Q96HG1 83 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 KLHDC2Q9Y2U9 406 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 F11RQ9Y624 299 aaKnown RBP7.61□□□□□ -1.19
CTNND1-208ENST00000428599 CDK2AP2O75956 126 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 EFEMP2O95967 443 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 GLIPR1P48060 266 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 NPBWR2P48146 333 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 FAM209BQ5JX69 171 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 LEMD1Q68G75 181 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 SLC25A34Q6PIV7 304 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 LINC00305Q7Z4B0 112 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 FDCSPQ8NFU4 85 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 FAM57AQ8TBR7 257 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 TRAV24A0A0B4J272 114 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 TM4SF5O14894 197 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 SMIM6P0DI80 62 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 RCC1P18754 421 aaPredicted RBP7.61□□□□□ -1.19
CTNND1-208ENST00000428599 RNASE4P34096 147 aaKnown RBP7.61□□□□□ -1.19
CTNND1-208ENST00000428599 GLRXP35754 106 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 TMEM42Q69YG0 159 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 COLCA1Q6ZS62 124 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 CBLN2Q8IUK8 224 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 ZPLD1Q8TCW7 415 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 C11orf68Q9H3H3 251 aaKnown RBP7.61□□□□□ -1.19
CTNND1-208ENST00000428599 GP6Q9HCN6 339 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 HSPB1P04792 205 aaKnown RBP7.61□□□□□ -1.19
CTNND1-208ENST00000428599 ZIC4Q8N9L1 334 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 SPSB2Q99619 263 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 RPRMQ9NS64 109 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 ZG16O60844 167 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 MOSP00540 346 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 NSUN5P1Q3KNT7 163 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 SFRP2Q96HF1 295 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 FOXC2Q99958 501 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 NABP2Q9BQ15 211 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 SRXN1Q9BYN0 137 aa7.61□□□□□ -1.19
CTNND1-208ENST00000428599 CRYBB3P26998 211 aa7.6□□□□□ -1.19
CTNND1-208ENST00000428599 LDLRAD2Q5SZI1 272 aa7.6□□□□□ -1.19
CTNND1-208ENST00000428599 CYP2G1PQ6ZSU1 146 aa7.6□□□□□ -1.19
CTNND1-208ENST00000428599 OR11H4Q8NGC9 324 aa7.6□□□□□ -1.19
CTNND1-208ENST00000428599 ALX4Q9H161 411 aaPredicted RBP7.6□□□□□ -1.19
CTNND1-208ENST00000428599 PARLQ9H300 379 aa7.6□□□□□ -1.19
CTNND1-208ENST00000428599 ABCA7Q8IZY2 2146 aa7.6□□□□□ -1.19
CTNND1-208ENST00000428599 FUT5Q11128 374 aa7.6□□□□□ -1.19
CTNND1-208ENST00000428599 SNAI3Q3KNW1 292 aa7.6□□□□□ -1.19
CTNND1-208ENST00000428599 ZNF385CQ66K41 422 aaPredicted RBP7.6□□□□□ -1.19
CTNND1-208ENST00000428599 C21orf62Q9NYP8 219 aa7.6□□□□□ -1.19
CTNND1-208ENST00000428599 IGHV3-49A0A0A0MS15 119 aa7.6□□□□□ -1.19
CTNND1-208ENST00000428599 BSPH1Q075Z2 132 aa7.6□□□□□ -1.19
CTNND1-208ENST00000428599 CLEC19AQ6UXS0 136 aa7.6□□□□□ -1.19
CTNND1-208ENST00000428599 TEX45Q8NA69 505 aa7.6□□□□□ -1.19
CTNND1-208ENST00000428599 ABHD17AQ96GS6 310 aa7.6□□□□□ -1.19
CTNND1-208ENST00000428599 TMEM160Q9NX00 188 aa7.6□□□□□ -1.19
CTNND1-208ENST00000428599 SVILO95425 2214 aa7.6□□□□□ -1.19
CTNND1-208ENST00000428599 TRBV9A0A0B4J1U6 114 aa7.6□□□□□ -1.19
CTNND1-208ENST00000428599 GPR183P32249 361 aa7.6□□□□□ -1.19
CTNND1-208ENST00000428599 TMEM167AQ8TBQ9 72 aa7.6□□□□□ -1.19
CTNND1-208ENST00000428599 MBD3L1Q8WWY6 194 aa7.6□□□□□ -1.19
CTNND1-208ENST00000428599 HIST1H2BAQ96A08 127 aa7.6□□□□□ -1.19
CTNND1-208ENST00000428599 V9GYH0 126 aa7.6□□□□□ -1.19
CTNND1-208ENST00000428599 TCF21O43680 179 aa7.59□□□□□ -1.19
CTNND1-208ENST00000428599 NAT1P18440 290 aa7.59□□□□□ -1.19
CTNND1-208ENST00000428599 CA7P43166 264 aa7.59□□□□□ -1.19
CTNND1-208ENST00000428599 ICAM4Q14773 271 aa7.59□□□□□ -1.19
CTNND1-208ENST00000428599 TCF23Q7RTU1 214 aa7.59□□□□□ -1.19
CTNND1-208ENST00000428599 OSR1Q8TAX0 266 aaPredicted RBP7.59□□□□□ -1.19
CTNND1-208ENST00000428599 GATAD1Q8WUU5 269 aa7.59□□□□□ -1.19
CTNND1-208ENST00000428599 FOXA2Q9Y261 457 aaPredicted RBP7.59□□□□□ -1.19
CTNND1-208ENST00000428599 A0A1W2PP11 408 aa7.59□□□□□ -1.19
CTNND1-208ENST00000428599 FAM27E3Q08E93 113 aa7.59□□□□□ -1.19
CTNND1-208ENST00000428599 WDR82Q6UXN9 313 aa7.59□□□□□ -1.19
CTNND1-208ENST00000428599 FBXL15Q9H469 300 aa7.59□□□□□ -1.19
CTNND1-208ENST00000428599 RRHO14718 337 aa7.59□□□□□ -1.19
CTNND1-208ENST00000428599 DUSP14O95147 198 aaKnown RBP7.59□□□□□ -1.19
CTNND1-208ENST00000428599 CMC4P56277 68 aaPredicted RBP7.59□□□□□ -1.19
CTNND1-208ENST00000428599 HBBP68871 147 aa7.59□□□□□ -1.19
CTNND1-208ENST00000428599 DEFB121Q5J5C9 76 aa7.59□□□□□ -1.19
CTNND1-208ENST00000428599 VKORC1L1Q8N0U8 176 aa7.59□□□□□ -1.19
CTNND1-208ENST00000428599 TMEM54Q969K7 222 aa7.59□□□□□ -1.19
CTNND1-208ENST00000428599 SCGB3A1Q96QR1 104 aa7.59□□□□□ -1.19
CTNND1-208ENST00000428599 PLSCR2Q9NRY7 297 aa7.59□□□□□ -1.19
CTNND1-208ENST00000428599 AHCTF1Q8WYP5 2266 aa7.59□□□□□ -1.19
CTNND1-208ENST00000428599 EIF3GO75821 320 aaKnown RBP eCLIP7.59□□□□□ -1.19
CTNND1-208ENST00000428599 IL6RP08887 468 aaPredicted RBP7.59□□□□□ -1.19
CTNND1-208ENST00000428599 PPP1R32Q7Z5V6 425 aa7.59□□□□□ -1.19
CTNND1-208ENST00000428599 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.59□□□□□ -1.19
CTNND1-208ENST00000428599 OR5P3Q8WZ94 311 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms