RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 KIAA1456Q9P272 454 aa9.94□□□□□ -0.82
TRIM39-207ENST00000428404 PITPNC1Q9UKF7 332 aa9.94□□□□□ -0.82
TRIM39-207ENST00000428404 ZNF257Q9Y2Q1 563 aa9.94□□□□□ -0.82
TRIM39-207ENST00000428404 FN1P02751 2386 aaKnown RBP9.94□□□□□ -0.82
TRIM39-207ENST00000428404 TRAV14DV4A0A0A6YYC5 116 aa9.93□□□□□ -0.82
TRIM39-207ENST00000428404 TEX50A0A1B0GTY4 177 aa9.93□□□□□ -0.82
TRIM39-207ENST00000428404 NCBP2LA6PVI3 153 aaKnown RBP9.93□□□□□ -0.82
TRIM39-207ENST00000428404 H0YIZ8 118 aa9.93□□□□□ -0.82
TRIM39-207ENST00000428404 FGF16O43320 207 aa9.93□□□□□ -0.82
TRIM39-207ENST00000428404 PFDN1O60925 122 aa9.93□□□□□ -0.82
TRIM39-207ENST00000428404 MPC2O95563 127 aa9.93□□□□□ -0.82
TRIM39-207ENST00000428404 PSMB6P28072 239 aa9.93□□□□□ -0.82
TRIM39-207ENST00000428404 OR2B8PP59922 312 aa9.93□□□□□ -0.82
TRIM39-207ENST00000428404 SPCS3P61009 180 aa9.93□□□□□ -0.82
TRIM39-207ENST00000428404 SCGB2A2Q13296 93 aa9.93□□□□□ -0.82
TRIM39-207ENST00000428404 RAB32Q13637 225 aa9.93□□□□□ -0.82
TRIM39-207ENST00000428404 LY6EQ16553 131 aa9.93□□□□□ -0.82
TRIM39-207ENST00000428404 C16orf82Q7Z2V1 217 aa9.93□□□□□ -0.82
TRIM39-207ENST00000428404 TMEM219Q86XT9 240 aa9.93□□□□□ -0.82
TRIM39-207ENST00000428404 TMEM86BQ8N661 226 aa9.93□□□□□ -0.82
TRIM39-207ENST00000428404 C5orf56Q8N8D9 126 aa9.93□□□□□ -0.82
TRIM39-207ENST00000428404 OR2T35Q8NGX2 323 aa9.93□□□□□ -0.82
TRIM39-207ENST00000428404 OR5B3Q8NH48 314 aa9.93□□□□□ -0.82
TRIM39-207ENST00000428404 RNF126Q9BV68 326 aa9.93□□□□□ -0.82
TRIM39-207ENST00000428404 C11orf1Q9H5F2 150 aa9.93□□□□□ -0.82
TRIM39-207ENST00000428404 ZFP57Q9NU63 452 aa9.93□□□□□ -0.82
TRIM39-207ENST00000428404 OR51B2Q9Y5P1 312 aa9.93□□□□□ -0.82
TRIM39-207ENST00000428404 POMT1Q9Y6A1 747 aa9.93□□□□□ -0.82
TRIM39-207ENST00000428404 PLXNB1O43157 2135 aa9.92□□□□□ -0.82
TRIM39-207ENST00000428404 A0A1B0GW64 132 aa9.92□□□□□ -0.82
TRIM39-207ENST00000428404 CGB1A6NKQ9 187 aa9.92□□□□□ -0.82
TRIM39-207ENST00000428404 INAFM1C9JVW0 142 aa9.92□□□□□ -0.82
TRIM39-207ENST00000428404 E7EUB6 86 aa9.92□□□□□ -0.82
TRIM39-207ENST00000428404 K7EPK0 472 aa9.92□□□□□ -0.82
TRIM39-207ENST00000428404 HOXA3O43365 443 aaPredicted RBP9.92□□□□□ -0.82
TRIM39-207ENST00000428404 CHST1O43916 411 aa9.92□□□□□ -0.82
TRIM39-207ENST00000428404 HLA-DRB1P01911 266 aa9.92□□□□□ -0.82
TRIM39-207ENST00000428404 LYL1P12980 280 aa9.92□□□□□ -0.82
TRIM39-207ENST00000428404 MYOD1P15172 320 aa9.92□□□□□ -0.82
TRIM39-207ENST00000428404 SRD5A1P18405 259 aa9.92□□□□□ -0.82
TRIM39-207ENST00000428404 COMPP49747 757 aaPredicted RBP9.92□□□□□ -0.82
TRIM39-207ENST00000428404 ZNF562Q6V9R5 426 aa9.92□□□□□ -0.82
TRIM39-207ENST00000428404 Q71RC1 249 aaPredicted RBP9.92□□□□□ -0.82
TRIM39-207ENST00000428404 OR1L8Q8NGR8 309 aa9.92□□□□□ -0.82
TRIM39-207ENST00000428404 NDUFA4L2Q9NRX3 87 aa9.92□□□□□ -0.82
TRIM39-207ENST00000428404 VPREB3Q9UKI3 123 aa9.92□□□□□ -0.82
TRIM39-207ENST00000428404 RCL1Q9Y2P8 373 aaKnown RBP9.92□□□□□ -0.82
TRIM39-207ENST00000428404 MOB4Q9Y3A3 225 aa9.92□□□□□ -0.82
TRIM39-207ENST00000428404 SMLR1H3BR10 107 aa9.91□□□□□ -0.82
TRIM39-207ENST00000428404 M0QZK8 103 aa9.91□□□□□ -0.82
TRIM39-207ENST00000428404 SYNGR2O43760 224 aa9.91□□□□□ -0.82
TRIM39-207ENST00000428404 RBMXL2O75526 392 aaKnown RBP9.91□□□□□ -0.82
TRIM39-207ENST00000428404 DEDDO75618 318 aa9.91□□□□□ -0.82
TRIM39-207ENST00000428404 TMEM50AO95807 157 aa9.91□□□□□ -0.82
TRIM39-207ENST00000428404 SLC25A4P12235 298 aa9.91□□□□□ -0.82
TRIM39-207ENST00000428404 POLR2GP62487 172 aaKnown RBP eCLIP9.91□□□□□ -0.82
TRIM39-207ENST00000428404 CX3CL1P78423 397 aa9.91□□□□□ -0.82
TRIM39-207ENST00000428404 FGL1Q08830 312 aa9.91□□□□□ -0.82
TRIM39-207ENST00000428404 PLGLAQ15195 96 aa9.91□□□□□ -0.82
TRIM39-207ENST00000428404 CLCC1Q96S66 551 aa9.91□□□□□ -0.82
TRIM39-207ENST00000428404 RASL11BQ9BPW5 248 aa9.91□□□□□ -0.82
TRIM39-207ENST00000428404 COMMD5Q9GZQ3 224 aa9.91□□□□□ -0.82
TRIM39-207ENST00000428404 MAGT1Q9H0U3 335 aa9.91□□□□□ -0.82
TRIM39-207ENST00000428404 RBKSQ9H477 322 aa9.91□□□□□ -0.82
TRIM39-207ENST00000428404 NF1P21359 2839 aa9.91□□□□□ -0.82
TRIM39-207ENST00000428404 NIPBLQ6KC79 2804 aaeCLIP9.9□□□□□ -0.82
TRIM39-207ENST00000428404 IGHV7-81A0A0B4J1V7 117 aa9.9□□□□□ -0.82
TRIM39-207ENST00000428404 BTBD17A6NE02 478 aa9.9□□□□□ -0.82
TRIM39-207ENST00000428404 INS-IGF2F8WCM5 200 aa9.9□□□□□ -0.82
TRIM39-207ENST00000428404 CLDN34H7C241 214 aa9.9□□□□□ -0.82
TRIM39-207ENST00000428404 MED6O75586 246 aa9.9□□□□□ -0.82
TRIM39-207ENST00000428404 NXPH3O95157 252 aa9.9□□□□□ -0.82
TRIM39-207ENST00000428404 CA2P00918 260 aa9.9□□□□□ -0.82
TRIM39-207ENST00000428404 IFNA17P01571 189 aa9.9□□□□□ -0.82
TRIM39-207ENST00000428404 C1QBP02746 253 aa9.9□□□□□ -0.82
TRIM39-207ENST00000428404 VDAC2P45880 294 aaPredicted RBP9.9□□□□□ -0.82
TRIM39-207ENST00000428404 PAX9P55771 341 aa9.9□□□□□ -0.82
TRIM39-207ENST00000428404 PRCDQ00LT1 54 aa9.9□□□□□ -0.82
TRIM39-207ENST00000428404 LRRC37A5PQ49AS3 106 aa9.9□□□□□ -0.82
TRIM39-207ENST00000428404 C10orf55Q5SWW7 151 aa9.9□□□□□ -0.82
TRIM39-207ENST00000428404 C11orf87Q6NUJ2 197 aa9.9□□□□□ -0.82
TRIM39-207ENST00000428404 PRSS54Q6PEW0 395 aa9.9□□□□□ -0.82
TRIM39-207ENST00000428404 TMEM65Q6PI78 240 aa9.9□□□□□ -0.82
TRIM39-207ENST00000428404 RBMS3Q6XE24 437 aaKnown RBP9.9□□□□□ -0.82
TRIM39-207ENST00000428404 OR11H4Q8NGC9 324 aa9.9□□□□□ -0.82
TRIM39-207ENST00000428404 RAB40CQ96S21 281 aa9.9□□□□□ -0.82
TRIM39-207ENST00000428404 OR5AC2Q9NZP5 309 aa9.9□□□□□ -0.82
TRIM39-207ENST00000428404 ZFHX3Q15911 3703 aa9.9□□□□□ -0.82
TRIM39-207ENST00000428404 TEX22C9J3V5 150 aa9.89□□□□□ -0.83
TRIM39-207ENST00000428404 SSSCA1O60232 199 aa9.89□□□□□ -0.83
TRIM39-207ENST00000428404 CRLF1O75462 422 aa9.89□□□□□ -0.83
TRIM39-207ENST00000428404 SCGB1D2O95969 90 aa9.89□□□□□ -0.83
TRIM39-207ENST00000428404 OPN1MWP04001 364 aa9.89□□□□□ -0.83
TRIM39-207ENST00000428404 FAM157CP0CG43 387 aa9.89□□□□□ -0.83
TRIM39-207ENST00000428404 OPN1MW2P0DN77 364 aa9.89□□□□□ -0.83
TRIM39-207ENST00000428404 OPN1MW3P0DN78 364 aa9.89□□□□□ -0.83
TRIM39-207ENST00000428404 EGR2P11161 476 aaPredicted RBP9.89□□□□□ -0.83
TRIM39-207ENST00000428404 RPL27AP46776 148 aaKnown RBP9.89□□□□□ -0.83
TRIM39-207ENST00000428404 TAS2R30P59541 319 aa9.89□□□□□ -0.83
TRIM39-207ENST00000428404 S100A10P60903 97 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms