RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 SPANXN1Q5VSR9 72 aa16.6■□□□□ 0.25
HCG18-235ENST00000426882 CYP2G1PQ6ZSU1 146 aa16.6■□□□□ 0.25
HCG18-235ENST00000426882 TRAV24A0A0B4J272 114 aa16.6■□□□□ 0.25
HCG18-235ENST00000426882 LOC389332A0A1B0GUA5 103 aa16.6■□□□□ 0.25
HCG18-235ENST00000426882 TMPRSS3P57727 454 aa16.6■□□□□ 0.25
HCG18-235ENST00000426882 OR4A47Q6IF82 309 aa16.6■□□□□ 0.25
HCG18-235ENST00000426882 RALYQ9UKM9 306 aaKnown RBP16.6■□□□□ 0.25
HCG18-235ENST00000426882 FOXG1P55316 489 aaPredicted RBP16.59■□□□□ 0.25
HCG18-235ENST00000426882 WFIKKN1Q96NZ8 548 aa16.59■□□□□ 0.25
HCG18-235ENST00000426882 PEAR1Q5VY43 1037 aaPredicted RBP16.59■□□□□ 0.25
HCG18-235ENST00000426882 LHFPL1Q86WI0 220 aa16.59■□□□□ 0.25
HCG18-235ENST00000426882 GTF3AQ92664 365 aaKnown RBP16.59■□□□□ 0.25
HCG18-235ENST00000426882 MRPL32Q9BYC8 188 aaKnown RBP16.59■□□□□ 0.25
HCG18-235ENST00000426882 FGF16O43320 207 aa16.59■□□□□ 0.25
HCG18-235ENST00000426882 RPLP1P05386 114 aaKnown RBP16.59■□□□□ 0.25
HCG18-235ENST00000426882 SFTPCP11686 197 aa16.59■□□□□ 0.25
HCG18-235ENST00000426882 MUC15Q8N387 334 aa16.59■□□□□ 0.25
HCG18-235ENST00000426882 CLDND2Q8NHS1 167 aa16.59■□□□□ 0.25
HCG18-235ENST00000426882 SLC25A33Q9BSK2 321 aa16.59■□□□□ 0.25
HCG18-235ENST00000426882 ELOVL5Q9NYP7 299 aa16.59■□□□□ 0.25
HCG18-235ENST00000426882 GRIFINA4D1Z8 144 aa16.59■□□□□ 0.25
HCG18-235ENST00000426882 CENPWQ5EE01 88 aa16.59■□□□□ 0.25
HCG18-235ENST00000426882 UNQ5815/PRO19632Q6UWF5 114 aa16.59■□□□□ 0.25
HCG18-235ENST00000426882 WFDC3Q8IUB2 231 aa16.59■□□□□ 0.25
HCG18-235ENST00000426882 PNKDQ8N490 385 aa16.59■□□□□ 0.25
HCG18-235ENST00000426882 OSR1Q8TAX0 266 aaPredicted RBP16.59■□□□□ 0.25
HCG18-235ENST00000426882 MRPL37Q9BZE1 423 aaKnown RBP16.59■□□□□ 0.25
HCG18-235ENST00000426882 KBTBD11-OT1A0A1B0GTJ5 212 aa16.58■□□□□ 0.25
HCG18-235ENST00000426882 IFITM10A6NMD0 228 aa16.58■□□□□ 0.25
HCG18-235ENST00000426882 MGPP08493 103 aa16.58■□□□□ 0.25
HCG18-235ENST00000426882 SRIP30626 198 aa16.58■□□□□ 0.25
HCG18-235ENST00000426882 MFAP4P55083 255 aa16.58■□□□□ 0.25
HCG18-235ENST00000426882 GGNQ86UU5 652 aa16.58■□□□□ 0.25
HCG18-235ENST00000426882 GGACTQ9BVM4 153 aa16.58■□□□□ 0.25
HCG18-235ENST00000426882 MOSP00540 346 aa16.58■□□□□ 0.24
HCG18-235ENST00000426882 PGLYRP4Q96LB8 373 aa16.58■□□□□ 0.24
HCG18-235ENST00000426882 TMEM106BQ9NUM4 274 aa16.58■□□□□ 0.24
HCG18-235ENST00000426882 FNDC1Q4ZHG4 1894 aaPredicted RBP16.58■□□□□ 0.24
HCG18-235ENST00000426882 SCN8AQ9UQD0 1980 aa16.58■□□□□ 0.24
HCG18-235ENST00000426882 B9A039 149 aa16.58■□□□□ 0.24
HCG18-235ENST00000426882 LOXL3P58215 753 aa16.58■□□□□ 0.24
HCG18-235ENST00000426882 RELBQ01201 579 aa16.58■□□□□ 0.24
HCG18-235ENST00000426882 AMY1AP04745 511 aa16.57■□□□□ 0.24
HCG18-235ENST00000426882 HTN1P15515 57 aa16.57■□□□□ 0.24
HCG18-235ENST00000426882 ID3Q02535 119 aa16.57■□□□□ 0.24
HCG18-235ENST00000426882 LIPFP07098 398 aa16.57■□□□□ 0.24
HCG18-235ENST00000426882 IGFBP2P18065 325 aa16.57■□□□□ 0.24
HCG18-235ENST00000426882 TWIST1Q15672 202 aa16.57■□□□□ 0.24
HCG18-235ENST00000426882 LBHQ53QV2 105 aaPredicted RBP16.57■□□□□ 0.24
HCG18-235ENST00000426882 DNM1P46Q6ZS02 220 aa16.57■□□□□ 0.24
HCG18-235ENST00000426882 LOC105371267A0A1B0GV96 52 aa16.57■□□□□ 0.24
HCG18-235ENST00000426882 SUPT4H1P63272 117 aaKnown RBP16.57■□□□□ 0.24
HCG18-235ENST00000426882 TMEM78Q5T7P6 136 aa16.57■□□□□ 0.24
HCG18-235ENST00000426882 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.57■□□□□ 0.24
HCG18-235ENST00000426882 SSBP3Q9BWW4 388 aaPredicted RBP16.57■□□□□ 0.24
HCG18-235ENST00000426882 C5orf63A6NC05 138 aa16.57■□□□□ 0.24
HCG18-235ENST00000426882 FAM209BQ5JX69 171 aa16.57■□□□□ 0.24
HCG18-235ENST00000426882 LINC01560Q8TB33 94 aa16.57■□□□□ 0.24
HCG18-235ENST00000426882 IFI27L2Q9H2X8 130 aa16.57■□□□□ 0.24
HCG18-235ENST00000426882 DDTP30046 118 aa16.56■□□□□ 0.24
HCG18-235ENST00000426882 FHL1Q13642 323 aa16.56■□□□□ 0.24
HCG18-235ENST00000426882 ZMAT5Q9UDW3 170 aaKnown RBP16.56■□□□□ 0.24
HCG18-235ENST00000426882 NBASA2RRP1 2371 aa16.56■□□□□ 0.24
HCG18-235ENST00000426882 CBLN1P23435 193 aa16.56■□□□□ 0.24
HCG18-235ENST00000426882 KIR2DL2P43627 348 aaPredicted RBP16.56■□□□□ 0.24
HCG18-235ENST00000426882 ELOVL1Q9BW60 279 aa16.56■□□□□ 0.24
HCG18-235ENST00000426882 IGKV3D-15A0A087WSY6 115 aa16.56■□□□□ 0.24
HCG18-235ENST00000426882 CGAP01215 116 aa16.56■□□□□ 0.24
HCG18-235ENST00000426882 ZNF497Q6ZNH5 498 aa16.56■□□□□ 0.24
HCG18-235ENST00000426882 RBPMS2Q6ZRY4 209 aaKnown RBP16.56■□□□□ 0.24
HCG18-235ENST00000426882 CDC42EP3Q9UKI2 254 aa16.56■□□□□ 0.24
HCG18-235ENST00000426882 TM4SF5O14894 197 aa16.56■□□□□ 0.24
HCG18-235ENST00000426882 RNF144BQ7Z419 303 aa16.56■□□□□ 0.24
HCG18-235ENST00000426882 RSPO3Q9BXY4 272 aaPredicted RBP16.56■□□□□ 0.24
HCG18-235ENST00000426882 IGKV1-27A0A075B6S5 117 aa16.55■□□□□ 0.24
HCG18-235ENST00000426882 SS18L1O75177 396 aaPredicted RBP16.55■□□□□ 0.24
HCG18-235ENST00000426882 PTPRDP23468 1912 aa16.55■□□□□ 0.24
HCG18-235ENST00000426882 TSC2P49815 1807 aa16.55■□□□□ 0.24
HCG18-235ENST00000426882 RPL7P18124 248 aaKnown RBP16.55■□□□□ 0.24
HCG18-235ENST00000426882 DGAT2L7PQ6IED9 249 aa16.55■□□□□ 0.24
HCG18-235ENST00000426882 SCGB1D4Q6XE38 83 aa16.55■□□□□ 0.24
HCG18-235ENST00000426882 CA7P43166 264 aa16.55■□□□□ 0.24
HCG18-235ENST00000426882 ATP5G3P48201 142 aa16.55■□□□□ 0.24
HCG18-235ENST00000426882 MYOZ3Q8TDC0 251 aa16.55■□□□□ 0.24
HCG18-235ENST00000426882 SRSF12Q8WXF0 261 aaKnown RBP16.55■□□□□ 0.24
HCG18-235ENST00000426882 ZCCHC14Q8WYQ9 949 aaKnown RBP16.55■□□□□ 0.24
HCG18-235ENST00000426882 INTS1Q8N201 2190 aaKnown RBP16.55■□□□□ 0.24
HCG18-235ENST00000426882 MGAMO43451 1857 aa16.55■□□□□ 0.24
HCG18-235ENST00000426882 LOC105371242A0A075B767 164 aa16.54■□□□□ 0.24
HCG18-235ENST00000426882 TFF1P04155 84 aa16.54■□□□□ 0.24
HCG18-235ENST00000426882 WDR82Q6UXN9 313 aa16.54■□□□□ 0.24
HCG18-235ENST00000426882 FAM90A1Q86YD7 464 aa16.54■□□□□ 0.24
HCG18-235ENST00000426882 LRTM2Q8N967 370 aa16.54■□□□□ 0.24
HCG18-235ENST00000426882 PNRC2Q9NPJ4 139 aaKnown RBP16.54■□□□□ 0.24
HCG18-235ENST00000426882 TRAV30A0A087WSZ9 112 aa16.54■□□□□ 0.24
HCG18-235ENST00000426882 APOBEC3AP31941 199 aaPredicted RBP16.54■□□□□ 0.24
HCG18-235ENST00000426882 CLEC2AQ6UVW9 174 aa16.54■□□□□ 0.24
HCG18-235ENST00000426882 OR4B1Q8NGF8 309 aa16.54■□□□□ 0.24
HCG18-235ENST00000426882 OR4D5Q8NGN0 318 aa16.54■□□□□ 0.24
HCG18-235ENST00000426882 LINC00305Q7Z4B0 112 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms