RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 A0A1B0GW64 132 aa13.95□□□□□ -0.18
HERC3-205ENST00000426683 KRASP01116 189 aa13.95□□□□□ -0.18
HERC3-205ENST00000426683 OR8U8P0C7N1 319 aa13.95□□□□□ -0.18
HERC3-205ENST00000426683 G6PCP35575 357 aa13.95□□□□□ -0.18
HERC3-205ENST00000426683 DEFA5Q01523 94 aa13.95□□□□□ -0.18
HERC3-205ENST00000426683 PYDC2Q56P42 97 aa13.95□□□□□ -0.18
HERC3-205ENST00000426683 TTC9CQ8N5M4 171 aa13.95□□□□□ -0.18
HERC3-205ENST00000426683 OR13C8Q8NGS7 320 aa13.95□□□□□ -0.18
HERC3-205ENST00000426683 ZFAND1Q8TCF1 268 aa13.95□□□□□ -0.18
HERC3-205ENST00000426683 MARCH1Q8TCQ1 289 aa13.95□□□□□ -0.18
HERC3-205ENST00000426683 MRGPRFQ96AM1 343 aa13.95□□□□□ -0.18
HERC3-205ENST00000426683 MCRIP2Q9BUT9 160 aaKnown RBP13.95□□□□□ -0.18
HERC3-205ENST00000426683 NDUFA13Q9P0J0 144 aa13.95□□□□□ -0.18
HERC3-205ENST00000426683 IGHV4OR15-8A0A075B7B6 117 aa13.94□□□□□ -0.18
HERC3-205ENST00000426683 A0A087WW49 117 aa13.94□□□□□ -0.18
HERC3-205ENST00000426683 A0A0G2JLM5 398 aa13.94□□□□□ -0.18
HERC3-205ENST00000426683 DPPA5A6NC42 116 aa13.94□□□□□ -0.18
HERC3-205ENST00000426683 LINC01619G3V211 115 aa13.94□□□□□ -0.18
HERC3-205ENST00000426683 PRH1P02810 166 aa13.94□□□□□ -0.18
HERC3-205ENST00000426683 FOXB2Q5VYV0 432 aa13.94□□□□□ -0.18
HERC3-205ENST00000426683 CCDC190Q86UF4 302 aa13.94□□□□□ -0.18
HERC3-205ENST00000426683 SLC25A42Q86VD7 318 aa13.94□□□□□ -0.18
HERC3-205ENST00000426683 COMMD5Q9GZQ3 224 aa13.94□□□□□ -0.18
HERC3-205ENST00000426683 COPZ2Q9P299 210 aa13.94□□□□□ -0.18
HERC3-205ENST00000426683 CGB1A6NKQ9 187 aa13.93□□□□□ -0.18
HERC3-205ENST00000426683 CTSDP07339 412 aaPredicted RBP13.93□□□□□ -0.18
HERC3-205ENST00000426683 PTBP1P26599 531 aaKnown RBP eCLIP13.93□□□□□ -0.18
HERC3-205ENST00000426683 ECI1P42126 302 aa13.93□□□□□ -0.18
HERC3-205ENST00000426683 OR2B8PP59922 312 aa13.93□□□□□ -0.18
HERC3-205ENST00000426683 ZNF79Q15937 498 aa13.93□□□□□ -0.18
HERC3-205ENST00000426683 CCDC71LQ8N9Z2 235 aa13.93□□□□□ -0.18
HERC3-205ENST00000426683 OR51S1Q8NGJ8 323 aa13.93□□□□□ -0.18
HERC3-205ENST00000426683 PRRT1Q99946 306 aa13.93□□□□□ -0.18
HERC3-205ENST00000426683 GPR61Q9BZJ8 451 aa13.93□□□□□ -0.18
HERC3-205ENST00000426683 ZNF257Q9Y2Q1 563 aa13.93□□□□□ -0.18
HERC3-205ENST00000426683 NPIPB5A8MRT5 1133 aa13.92□□□□□ -0.18
HERC3-205ENST00000426683 H0Y980 276 aa13.92□□□□□ -0.18
HERC3-205ENST00000426683 RBMXL2O75526 392 aaKnown RBP13.92□□□□□ -0.18
HERC3-205ENST00000426683 IGKV1-39P01597 117 aa13.92□□□□□ -0.18
HERC3-205ENST00000426683 PRB2P02812 416 aaPredicted RBP13.92□□□□□ -0.18
HERC3-205ENST00000426683 IGKV1D-39P04432 117 aa13.92□□□□□ -0.18
HERC3-205ENST00000426683 HSPB1P04792 205 aaKnown RBP13.92□□□□□ -0.18
HERC3-205ENST00000426683 SERPINE2P07093 398 aa13.92□□□□□ -0.18
HERC3-205ENST00000426683 FGF2P09038 288 aa13.92□□□□□ -0.18
HERC3-205ENST00000426683 AREGP15514 252 aa13.92□□□□□ -0.18
HERC3-205ENST00000426683 SLURP1P55000 103 aa13.92□□□□□ -0.18
HERC3-205ENST00000426683 RHOGP84095 191 aa13.92□□□□□ -0.18
HERC3-205ENST00000426683 ZNF45Q02386 682 aa13.92□□□□□ -0.18
HERC3-205ENST00000426683 C19orf35Q6ZS72 473 aa13.92□□□□□ -0.18
HERC3-205ENST00000426683 CADM3Q8N126 398 aa13.92□□□□□ -0.18
HERC3-205ENST00000426683 Q8N402 240 aa13.92□□□□□ -0.18
HERC3-205ENST00000426683 OR6Q1Q8NGQ2 317 aa13.92□□□□□ -0.18
HERC3-205ENST00000426683 TRIM63Q969Q1 353 aa13.92□□□□□ -0.18
HERC3-205ENST00000426683 USMG5Q96IX5 58 aa13.92□□□□□ -0.18
HERC3-205ENST00000426683 MCUBQ9NWR8 336 aa13.92□□□□□ -0.18
HERC3-205ENST00000426683 C14orf166Q9Y224 244 aaKnown RBP13.92□□□□□ -0.18
HERC3-205ENST00000426683 NSG2Q9Y328 171 aa13.92□□□□□ -0.18
HERC3-205ENST00000426683 MEGF8Q7Z7M0 2845 aa13.92□□□□□ -0.18
HERC3-205ENST00000426683 TNCP24821 2201 aa13.91□□□□□ -0.18
HERC3-205ENST00000426683 C3orf85A0A1B0GTC6 90 aa13.91□□□□□ -0.18
HERC3-205ENST00000426683 ANKRD34BA5PLL1 514 aa13.91□□□□□ -0.18
HERC3-205ENST00000426683 WIPF1O43516 503 aa13.91□□□□□ -0.18
HERC3-205ENST00000426683 SNAPC5O75971 98 aa13.91□□□□□ -0.18
HERC3-205ENST00000426683 PSMB6P28072 239 aa13.91□□□□□ -0.18
HERC3-205ENST00000426683 SURF2Q15527 256 aaPredicted RBP13.91□□□□□ -0.18
HERC3-205ENST00000426683 SPANXN2Q5MJ10 180 aa13.91□□□□□ -0.18
HERC3-205ENST00000426683 DCUN1D4Q92564 292 aa13.91□□□□□ -0.18
HERC3-205ENST00000426683 SEC22AQ96IW7 307 aa13.91□□□□□ -0.18
HERC3-205ENST00000426683 TP53RKQ96S44 253 aa13.91□□□□□ -0.18
HERC3-205ENST00000426683 RTBDNQ9BSG5 229 aaPredicted RBP13.91□□□□□ -0.18
HERC3-205ENST00000426683 AKIP1Q9NQ31 210 aa13.91□□□□□ -0.18
HERC3-205ENST00000426683 SLC2A8Q9NY64 477 aa13.91□□□□□ -0.18
HERC3-205ENST00000426683 SCP2D1Q9UJQ7 156 aa13.91□□□□□ -0.18
HERC3-205ENST00000426683 TRBV9A0A0B4J1U6 114 aa13.9□□□□□ -0.18
HERC3-205ENST00000426683 TEX50A0A1B0GTY4 177 aa13.9□□□□□ -0.18
HERC3-205ENST00000426683 FAM223BA6NKX1 122 aa13.9□□□□□ -0.18
HERC3-205ENST00000426683 OR2J3O76001 311 aa13.9□□□□□ -0.18
HERC3-205ENST00000426683 REG1AP05451 166 aa13.9□□□□□ -0.18
HERC3-205ENST00000426683 CRYGCP07315 174 aa13.9□□□□□ -0.18
HERC3-205ENST00000426683 CTRB1P17538 263 aa13.9□□□□□ -0.18
HERC3-205ENST00000426683 HOXD3P31249 432 aaPredicted RBP13.9□□□□□ -0.18
HERC3-205ENST00000426683 ETV6P41212 452 aa13.9□□□□□ -0.18
HERC3-205ENST00000426683 KLF9Q13886 244 aaPredicted RBP13.9□□□□□ -0.18
HERC3-205ENST00000426683 SP6Q3SY56 376 aa13.9□□□□□ -0.18
HERC3-205ENST00000426683 CTRB2Q6GPI1 263 aa13.9□□□□□ -0.18
HERC3-205ENST00000426683 FAM223AQ8IWN6 122 aa13.9□□□□□ -0.18
HERC3-205ENST00000426683 TOMM5Q8N4H5 51 aa13.9□□□□□ -0.18
HERC3-205ENST00000426683 DLX4Q92988 240 aaPredicted RBP13.9□□□□□ -0.18
HERC3-205ENST00000426683 TSC22D3Q99576 134 aa13.9□□□□□ -0.18
HERC3-205ENST00000426683 QTRT1Q9BXR0 403 aaKnown RBP13.9□□□□□ -0.18
HERC3-205ENST00000426683 C5orf66Q9H5L9 145 aa13.9□□□□□ -0.18
HERC3-205ENST00000426683 RANGRFQ9HD47 186 aaPredicted RBP13.9□□□□□ -0.18
HERC3-205ENST00000426683 GPR132Q9UNW8 380 aa13.9□□□□□ -0.18
HERC3-205ENST00000426683 OR51B2Q9Y5P1 312 aa13.9□□□□□ -0.18
HERC3-205ENST00000426683 NOTCH3Q9UM47 2321 aa13.89□□□□□ -0.19
HERC3-205ENST00000426683 IGLC7A0M8Q6 106 aa13.89□□□□□ -0.19
HERC3-205ENST00000426683 SEC14L6B5MCN3 397 aa13.89□□□□□ -0.19
HERC3-205ENST00000426683 TRAPPC2P0DI81 140 aa13.89□□□□□ -0.19
HERC3-205ENST00000426683 TRAPPC2BP0DI82 140 aa13.89□□□□□ -0.19
HERC3-205ENST00000426683 AP3S2P59780 193 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms