RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 FYTTD1Q96QD9 318 aaKnown RBP13.74□□□□□ -0.21
IGHV3-47-201ENST00000425060 HRASLSQ9HDD0 168 aa13.74□□□□□ -0.21
IGHV3-47-201ENST00000425060 FAM212BQ9NTI7 297 aaPredicted RBP13.74□□□□□ -0.21
IGHV3-47-201ENST00000425060 TMEM140Q9NV12 185 aa13.74□□□□□ -0.21
IGHV3-47-201ENST00000425060 ANKRD34BA5PLL1 514 aa13.73□□□□□ -0.21
IGHV3-47-201ENST00000425060 FAM223BA6NKX1 122 aa13.73□□□□□ -0.21
IGHV3-47-201ENST00000425060 MARCH11A6NNE9 402 aa13.73□□□□□ -0.21
IGHV3-47-201ENST00000425060 TRBV12-3P01733 135 aa13.73□□□□□ -0.21
IGHV3-47-201ENST00000425060 AREGP15514 252 aa13.73□□□□□ -0.21
IGHV3-47-201ENST00000425060 TBPP20226 339 aa13.73□□□□□ -0.21
IGHV3-47-201ENST00000425060 KLF5Q13887 457 aaPredicted RBP13.73□□□□□ -0.21
IGHV3-47-201ENST00000425060 PHLDA2Q53GA4 152 aa13.73□□□□□ -0.21
IGHV3-47-201ENST00000425060 C19orf35Q6ZS72 473 aa13.73□□□□□ -0.21
IGHV3-47-201ENST00000425060 FAM223AQ8IWN6 122 aa13.73□□□□□ -0.21
IGHV3-47-201ENST00000425060 SLC38A6Q8IZM9 456 aa13.73□□□□□ -0.21
IGHV3-47-201ENST00000425060 ARRDC1Q8N5I2 433 aa13.73□□□□□ -0.21
IGHV3-47-201ENST00000425060 TMEM229BQ8NBD8 167 aa13.73□□□□□ -0.21
IGHV3-47-201ENST00000425060 FANCD2OSQ96PS1 177 aa13.73□□□□□ -0.21
IGHV3-47-201ENST00000425060 NXF2Q9GZY0 626 aaKnown RBP13.73□□□□□ -0.21
IGHV3-47-201ENST00000425060 PEF1Q9UBV8 284 aaKnown RBP13.73□□□□□ -0.21
IGHV3-47-201ENST00000425060 DNAH9Q9NYC9 4486 aa13.72□□□□□ -0.21
IGHV3-47-201ENST00000425060 CTRB1P17538 263 aa13.72□□□□□ -0.21
IGHV3-47-201ENST00000425060 ZP3P21754 424 aa13.72□□□□□ -0.21
IGHV3-47-201ENST00000425060 PSMB6P28072 239 aa13.72□□□□□ -0.21
IGHV3-47-201ENST00000425060 MRPS10P82664 201 aaKnown RBP13.72□□□□□ -0.21
IGHV3-47-201ENST00000425060 SSBP1Q04837 148 aaKnown RBP13.72□□□□□ -0.21
IGHV3-47-201ENST00000425060 RNASE10Q5GAN6 216 aaKnown RBP13.72□□□□□ -0.21
IGHV3-47-201ENST00000425060 CTRB2Q6GPI1 263 aa13.72□□□□□ -0.21
IGHV3-47-201ENST00000425060 TBC1D26Q86UD7 250 aa13.72□□□□□ -0.21
IGHV3-47-201ENST00000425060 NECAP1Q8NC96 275 aa13.72□□□□□ -0.21
IGHV3-47-201ENST00000425060 DMBX1Q8NFW5 382 aa13.72□□□□□ -0.21
IGHV3-47-201ENST00000425060 OR4D10Q8NGI6 311 aa13.72□□□□□ -0.21
IGHV3-47-201ENST00000425060 DIRAS2Q96HU8 199 aa13.72□□□□□ -0.21
IGHV3-47-201ENST00000425060 CTDSPLO15194 276 aa13.71□□□□□ -0.21
IGHV3-47-201ENST00000425060 IFNA6P05013 189 aa13.71□□□□□ -0.21
IGHV3-47-201ENST00000425060 RPA2P15927 270 aa13.71□□□□□ -0.21
IGHV3-47-201ENST00000425060 ECI1P42126 302 aa13.71□□□□□ -0.21
IGHV3-47-201ENST00000425060 TAS2R19P59542 299 aa13.71□□□□□ -0.21
IGHV3-47-201ENST00000425060 ATP5G2Q06055 141 aa13.71□□□□□ -0.21
IGHV3-47-201ENST00000425060 DEFB121Q5J5C9 76 aa13.71□□□□□ -0.21
IGHV3-47-201ENST00000425060 SMIM4Q8WVI0 70 aa13.71□□□□□ -0.21
IGHV3-47-201ENST00000425060 SOSTQ9BQB4 213 aa13.71□□□□□ -0.21
IGHV3-47-201ENST00000425060 RABL2AQ9UBK7 228 aaPredicted RBP13.71□□□□□ -0.21
IGHV3-47-201ENST00000425060 RABL2BQ9UNT1 228 aa13.71□□□□□ -0.21
IGHV3-47-201ENST00000425060 LSM4Q9Y4Z0 139 aaKnown RBP13.71□□□□□ -0.21
IGHV3-47-201ENST00000425060 DMRT1Q9Y5R6 373 aa13.71□□□□□ -0.21
IGHV3-47-201ENST00000425060 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.7□□□□□ -0.22
IGHV3-47-201ENST00000425060 IGLC7A0M8Q6 106 aa13.7□□□□□ -0.22
IGHV3-47-201ENST00000425060 NOL3O60936 208 aaKnown RBP13.7□□□□□ -0.22
IGHV3-47-201ENST00000425060 SAP30O75446 220 aa13.7□□□□□ -0.22
IGHV3-47-201ENST00000425060 OR2J3O76001 311 aa13.7□□□□□ -0.22
IGHV3-47-201ENST00000425060 KRASP01116 189 aa13.7□□□□□ -0.22
IGHV3-47-201ENST00000425060 IGKV1-39P01597 117 aa13.7□□□□□ -0.22
IGHV3-47-201ENST00000425060 IGKV1D-39P04432 117 aa13.7□□□□□ -0.22
IGHV3-47-201ENST00000425060 PTBP1P26599 531 aaKnown RBP eCLIP13.7□□□□□ -0.22
IGHV3-47-201ENST00000425060 G6PCP35575 357 aa13.7□□□□□ -0.22
IGHV3-47-201ENST00000425060 RND3P61587 244 aa13.7□□□□□ -0.22
IGHV3-47-201ENST00000425060 IL34Q6ZMJ4 242 aa13.7□□□□□ -0.22
IGHV3-47-201ENST00000425060 ZNF486Q96H40 463 aaPredicted RBP13.7□□□□□ -0.22
IGHV3-47-201ENST00000425060 PRR25Q96S07 402 aa13.7□□□□□ -0.22
IGHV3-47-201ENST00000425060 SRSF8Q9BRL6 282 aaKnown RBP13.7□□□□□ -0.22
IGHV3-47-201ENST00000425060 COMMD5Q9GZQ3 224 aa13.7□□□□□ -0.22
IGHV3-47-201ENST00000425060 ZNF256Q9Y2P7 627 aaPredicted RBP13.7□□□□□ -0.22
IGHV3-47-201ENST00000425060 TEX50A0A1B0GTY4 177 aa13.69□□□□□ -0.22
IGHV3-47-201ENST00000425060 DPPA5A6NC42 116 aa13.69□□□□□ -0.22
IGHV3-47-201ENST00000425060 RAB3DO95716 219 aa13.69□□□□□ -0.22
IGHV3-47-201ENST00000425060 S100GP29377 79 aa13.69□□□□□ -0.22
IGHV3-47-201ENST00000425060 ERVK-16P61578 105 aa13.69□□□□□ -0.22
IGHV3-47-201ENST00000425060 EXOSC2Q13868 293 aaKnown RBP13.69□□□□□ -0.22
IGHV3-47-201ENST00000425060 C15orf32Q32M92 178 aa13.69□□□□□ -0.22
IGHV3-47-201ENST00000425060 STEAP1BQ6NZ63 245 aa13.69□□□□□ -0.22
IGHV3-47-201ENST00000425060 TERB2Q8NHR7 220 aa13.69□□□□□ -0.22
IGHV3-47-201ENST00000425060 MRGPRFQ96AM1 343 aa13.69□□□□□ -0.22
IGHV3-47-201ENST00000425060 SEC22AQ96IW7 307 aa13.69□□□□□ -0.22
IGHV3-47-201ENST00000425060 C6orf62Q9GZU0 229 aaPredicted RBP13.69□□□□□ -0.22
IGHV3-47-201ENST00000425060 RBM38Q9H0Z9 239 aaKnown RBP13.69□□□□□ -0.22
IGHV3-47-201ENST00000425060 SORL1Q92673 2214 aa13.68□□□□□ -0.22
IGHV3-47-201ENST00000425060 IGLV11-55A0A075B6I3 123 aa13.68□□□□□ -0.22
IGHV3-47-201ENST00000425060 BMPR1BO00238 502 aa13.68□□□□□ -0.22
IGHV3-47-201ENST00000425060 NDUFB8O95169 186 aa13.68□□□□□ -0.22
IGHV3-47-201ENST00000425060 REG1AP05451 166 aa13.68□□□□□ -0.22
IGHV3-47-201ENST00000425060 TNFSF8P32971 234 aa13.68□□□□□ -0.22
IGHV3-47-201ENST00000425060 IL18Q14116 193 aa13.68□□□□□ -0.22
IGHV3-47-201ENST00000425060 OR10W1Q8NGF6 305 aa13.68□□□□□ -0.22
IGHV3-47-201ENST00000425060 QTRT1Q9BXR0 403 aaKnown RBP13.68□□□□□ -0.22
IGHV3-47-201ENST00000425060 NDUFA4L2Q9NRX3 87 aa13.68□□□□□ -0.22
IGHV3-47-201ENST00000425060 FBXL7Q9UJT9 491 aa13.68□□□□□ -0.22
IGHV3-47-201ENST00000425060 NSG2Q9Y328 171 aa13.68□□□□□ -0.22
IGHV3-47-201ENST00000425060 GSTZ1O43708 216 aaPredicted RBP13.67□□□□□ -0.22
IGHV3-47-201ENST00000425060 TRAPPC2P0DI81 140 aa13.67□□□□□ -0.22
IGHV3-47-201ENST00000425060 TRAPPC2BP0DI82 140 aa13.67□□□□□ -0.22
IGHV3-47-201ENST00000425060 HIST1H1BP16401 226 aaKnown RBP13.67□□□□□ -0.22
IGHV3-47-201ENST00000425060 PI3P19957 117 aa13.67□□□□□ -0.22
IGHV3-47-201ENST00000425060 SYNJ2BPP57105 145 aa13.67□□□□□ -0.22
IGHV3-47-201ENST00000425060 THOC7Q6I9Y2 204 aaKnown RBP13.67□□□□□ -0.22
IGHV3-47-201ENST00000425060 OR9G4Q8NGQ1 327 aa13.67□□□□□ -0.22
IGHV3-47-201ENST00000425060 OR1L8Q8NGR8 309 aa13.67□□□□□ -0.22
IGHV3-47-201ENST00000425060 MCFD2Q8NI22 146 aa13.67□□□□□ -0.22
IGHV3-47-201ENST00000425060 OR4C12Q96R67 309 aa13.67□□□□□ -0.22
IGHV3-47-201ENST00000425060 ELOVL1Q9BW60 279 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms