RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 ZNF257Q9Y2Q1 563 aa8.47□□□□□ -1.05
USP49-204ENST00000423567 CEPT1Q9Y6K0 416 aa8.47□□□□□ -1.05
USP49-204ENST00000423567 CMYA5Q8N3K9 4069 aa8.46□□□□□ -1.05
USP49-204ENST00000423567 IGHV4OR15-8A0A075B7B6 117 aa8.46□□□□□ -1.06
USP49-204ENST00000423567 A0A087WW49 117 aa8.46□□□□□ -1.06
USP49-204ENST00000423567 FAM223BA6NKX1 122 aa8.46□□□□□ -1.06
USP49-204ENST00000423567 MARCH11A6NNE9 402 aa8.46□□□□□ -1.06
USP49-204ENST00000423567 UPK2O00526 184 aa8.46□□□□□ -1.06
USP49-204ENST00000423567 OVOL1O14753 267 aa8.46□□□□□ -1.06
USP49-204ENST00000423567 RAB3DO95716 219 aa8.46□□□□□ -1.06
USP49-204ENST00000423567 ZP3P21754 424 aa8.46□□□□□ -1.06
USP49-204ENST00000423567 INSL3P51460 131 aa8.46□□□□□ -1.06
USP49-204ENST00000423567 DGCR2P98153 550 aa8.46□□□□□ -1.06
USP49-204ENST00000423567 EGFEM1PQ0D2K5 195 aa8.46□□□□□ -1.06
USP49-204ENST00000423567 MEF2DQ14814 521 aa8.46□□□□□ -1.06
USP49-204ENST00000423567 SCGB2B2Q4G0G5 96 aa8.46□□□□□ -1.06
USP49-204ENST00000423567 FAM223AQ8IWN6 122 aa8.46□□□□□ -1.06
USP49-204ENST00000423567 ADAD2Q8NCV1 583 aaKnown RBP8.46□□□□□ -1.06
USP49-204ENST00000423567 SMIM4Q8WVI0 70 aa8.46□□□□□ -1.06
USP49-204ENST00000423567 DCUN1D4Q92564 292 aa8.46□□□□□ -1.06
USP49-204ENST00000423567 ZNF486Q96H40 463 aaPredicted RBP8.46□□□□□ -1.06
USP49-204ENST00000423567 RSRP1Q9BUV0 290 aa8.46□□□□□ -1.06
USP49-204ENST00000423567 RSL24D1Q9UHA3 163 aaKnown RBP8.46□□□□□ -1.06
USP49-204ENST00000423567 ANKRD34BA5PLL1 514 aa8.45□□□□□ -1.06
USP49-204ENST00000423567 FABP12A6NFH5 140 aa8.45□□□□□ -1.06
USP49-204ENST00000423567 HMX3A6NHT5 357 aa8.45□□□□□ -1.06
USP49-204ENST00000423567 NPIPB5A8MRT5 1133 aa8.45□□□□□ -1.06
USP49-204ENST00000423567 DISC1C4P0D8 188 aa8.45□□□□□ -1.06
USP49-204ENST00000423567 CTDSPLO15194 276 aa8.45□□□□□ -1.06
USP49-204ENST00000423567 SNAPC5O75971 98 aa8.45□□□□□ -1.06
USP49-204ENST00000423567 KRASP01116 189 aa8.45□□□□□ -1.06
USP49-204ENST00000423567 CD74P04233 296 aa8.45□□□□□ -1.06
USP49-204ENST00000423567 IL6RP08887 468 aaPredicted RBP8.45□□□□□ -1.06
USP49-204ENST00000423567 ZNF735P0CB33 412 aa8.45□□□□□ -1.06
USP49-204ENST00000423567 DEFA4P12838 97 aa8.45□□□□□ -1.06
USP49-204ENST00000423567 RPA2P15927 270 aa8.45□□□□□ -1.06
USP49-204ENST00000423567 S100A5P33763 92 aa8.45□□□□□ -1.06
USP49-204ENST00000423567 PPP5CP53041 499 aa8.45□□□□□ -1.06
USP49-204ENST00000423567 SLURP1P55000 103 aa8.45□□□□□ -1.06
USP49-204ENST00000423567 RHOGP84095 191 aa8.45□□□□□ -1.06
USP49-204ENST00000423567 ATP5G2Q06055 141 aa8.45□□□□□ -1.06
USP49-204ENST00000423567 FAM209BQ5JX69 171 aa8.45□□□□□ -1.06
USP49-204ENST00000423567 THOC7Q6I9Y2 204 aaKnown RBP8.45□□□□□ -1.06
USP49-204ENST00000423567 STEAP1BQ6NZ63 245 aa8.45□□□□□ -1.06
USP49-204ENST00000423567 TBC1D26Q86UD7 250 aa8.45□□□□□ -1.06
USP49-204ENST00000423567 ZNF429Q86V71 674 aa8.45□□□□□ -1.06
USP49-204ENST00000423567 NECAP1Q8NC96 275 aa8.45□□□□□ -1.06
USP49-204ENST00000423567 ZFAND1Q8TCF1 268 aa8.45□□□□□ -1.06
USP49-204ENST00000423567 DLX4Q92988 240 aaPredicted RBP8.45□□□□□ -1.06
USP49-204ENST00000423567 TSC22D3Q99576 134 aa8.45□□□□□ -1.06
USP49-204ENST00000423567 ELOVL1Q9BW60 279 aa8.45□□□□□ -1.06
USP49-204ENST00000423567 SLIRPQ9GZT3 109 aaKnown RBP8.45□□□□□ -1.06
USP49-204ENST00000423567 SLC2A9Q9NRM0 540 aa8.45□□□□□ -1.06
USP49-204ENST00000423567 FAM212BQ9NTI7 297 aaPredicted RBP8.45□□□□□ -1.06
USP49-204ENST00000423567 ELOA3CA0A087WX78 387 aaPredicted RBP8.44□□□□□ -1.06
USP49-204ENST00000423567 TEX22C9J3V5 150 aa8.44□□□□□ -1.06
USP49-204ENST00000423567 SAP30O75446 220 aa8.44□□□□□ -1.06
USP49-204ENST00000423567 PRH1P02810 166 aa8.44□□□□□ -1.06
USP49-204ENST00000423567 SERPINE2P07093 398 aa8.44□□□□□ -1.06
USP49-204ENST00000423567 FGF2P09038 288 aa8.44□□□□□ -1.06
USP49-204ENST00000423567 AKAIN1P0CW23 69 aa8.44□□□□□ -1.06
USP49-204ENST00000423567 HIST1H1BP16401 226 aaKnown RBP8.44□□□□□ -1.06
USP49-204ENST00000423567 G6PCP35575 357 aa8.44□□□□□ -1.06
USP49-204ENST00000423567 ECI1P42126 302 aa8.44□□□□□ -1.06
USP49-204ENST00000423567 KRTAP10-11P60412 298 aa8.44□□□□□ -1.06
USP49-204ENST00000423567 DCTN2Q13561 401 aaKnown RBP8.44□□□□□ -1.06
USP49-204ENST00000423567 TATDN3Q17R31 274 aa8.44□□□□□ -1.06
USP49-204ENST00000423567 CCDC71LQ8N9Z2 235 aa8.44□□□□□ -1.06
USP49-204ENST00000423567 TERB2Q8NHR7 220 aa8.44□□□□□ -1.06
USP49-204ENST00000423567 NXF2Q9GZY0 626 aaKnown RBP8.44□□□□□ -1.06
USP49-204ENST00000423567 AKIP1Q9NQ31 210 aa8.44□□□□□ -1.06
USP49-204ENST00000423567 COPZ2Q9P299 210 aa8.44□□□□□ -1.06
USP49-204ENST00000423567 PEF1Q9UBV8 284 aaKnown RBP8.44□□□□□ -1.06
USP49-204ENST00000423567 TRAV3A0A0B4J244 114 aa8.43□□□□□ -1.06
USP49-204ENST00000423567 ZNF701M0R085 212 aaPredicted RBP8.43□□□□□ -1.06
USP49-204ENST00000423567 CYB5BO43169 146 aa8.43□□□□□ -1.06
USP49-204ENST00000423567 OR2J3O76001 311 aa8.43□□□□□ -1.06
USP49-204ENST00000423567 ATG12O94817 140 aa8.43□□□□□ -1.06
USP49-204ENST00000423567 TRAPPC2P0DI81 140 aa8.43□□□□□ -1.06
USP49-204ENST00000423567 TRAPPC2BP0DI82 140 aa8.43□□□□□ -1.06
USP49-204ENST00000423567 PSMB6P28072 239 aa8.43□□□□□ -1.06
USP49-204ENST00000423567 TNFSF8P32971 234 aa8.43□□□□□ -1.06
USP49-204ENST00000423567 PIGPP57054 158 aa8.43□□□□□ -1.06
USP49-204ENST00000423567 OR2B8PP59922 312 aa8.43□□□□□ -1.06
USP49-204ENST00000423567 RND3P61587 244 aa8.43□□□□□ -1.06
USP49-204ENST00000423567 DEFA5Q01523 94 aa8.43□□□□□ -1.06
USP49-204ENST00000423567 EXOSC2Q13868 293 aaKnown RBP8.43□□□□□ -1.06
USP49-204ENST00000423567 RPEL1Q2QD12 228 aa8.43□□□□□ -1.06
USP49-204ENST00000423567 DEFB121Q5J5C9 76 aa8.43□□□□□ -1.06
USP49-204ENST00000423567 ZNF343Q6P1L6 599 aa8.43□□□□□ -1.06
USP49-204ENST00000423567 H2BFWTQ7Z2G1 175 aa8.43□□□□□ -1.06
USP49-204ENST00000423567 HSD17B13Q7Z5P4 300 aaPredicted RBP8.43□□□□□ -1.06
USP49-204ENST00000423567 LHFPL1Q86WI0 220 aa8.43□□□□□ -1.06
USP49-204ENST00000423567 CADM3Q8N126 398 aa8.43□□□□□ -1.06
USP49-204ENST00000423567 OR4D10Q8NGI6 311 aa8.43□□□□□ -1.06
USP49-204ENST00000423567 OR1L8Q8NGR8 309 aa8.43□□□□□ -1.06
USP49-204ENST00000423567 OR4C12Q96R67 309 aa8.43□□□□□ -1.06
USP49-204ENST00000423567 PRRT1Q99946 306 aa8.43□□□□□ -1.06
USP49-204ENST00000423567 SRSF8Q9BRL6 282 aaKnown RBP8.43□□□□□ -1.06
USP49-204ENST00000423567 HINT2Q9BX68 163 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms