RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 RAB7AP51149 207 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 HFEQ30201 348 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 FFAR4Q5NUL3 377 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 OR13D1Q8NGV5 346 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 OR4S2Q8NH73 311 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 NGBQ9NPG2 151 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 KIAA1456Q9P272 454 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 NDRG3Q9UGV2 375 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 LAMP3Q9UQV4 416 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 LINC00312Q9Y6C7 94 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 PIGBOS1A0A0B4J2F0 54 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 A0A1W2PPH5 198 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 MAP1LC3B2A6NCE7 125 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 FAM24BQ8N5W8 94 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 SSMEM1Q8WWF3 244 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 MAP1LC3BQ9GZQ8 125 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 MS4A5Q9H3V2 200 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 URGCP-MRPS24S4R325 110 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 COLCA2A8K830 154 aa7.17□□□□□ -1.26
SNCA-206ENST00000420646 H3BQ15 152 aa7.17□□□□□ -1.26
SNCA-206ENST00000420646 CHRNB4P30926 498 aa7.17□□□□□ -1.26
SNCA-206ENST00000420646 VDAC2P45880 294 aaPredicted RBP7.17□□□□□ -1.26
SNCA-206ENST00000420646 UQCRFS1P47985 274 aa7.17□□□□□ -1.26
SNCA-206ENST00000420646 C10orf55Q5SWW7 151 aa7.17□□□□□ -1.26
SNCA-206ENST00000420646 C1orf87Q8N0U7 546 aa7.17□□□□□ -1.26
SNCA-206ENST00000420646 Q8N7P7 452 aa7.17□□□□□ -1.26
SNCA-206ENST00000420646 OR10G4Q8NGN3 311 aa7.17□□□□□ -1.26
SNCA-206ENST00000420646 OR10G9Q8NGN4 311 aa7.17□□□□□ -1.26
SNCA-206ENST00000420646 OR10G7Q8NGN6 311 aa7.17□□□□□ -1.26
SNCA-206ENST00000420646 LHX4Q969G2 390 aa7.17□□□□□ -1.26
SNCA-206ENST00000420646 TMEM147Q9BVK8 224 aa7.17□□□□□ -1.26
SNCA-206ENST00000420646 SLC35D1Q9NTN3 355 aa7.17□□□□□ -1.26
SNCA-206ENST00000420646 SLC39A9Q9NUM3 307 aa7.17□□□□□ -1.26
SNCA-206ENST00000420646 hCG_1809904A0A1W2PP81 198 aa7.17□□□□□ -1.26
SNCA-206ENST00000420646 A0A1W2PR64 198 aa7.17□□□□□ -1.26
SNCA-206ENST00000420646 A0A1W2PRV1 198 aa7.17□□□□□ -1.26
SNCA-206ENST00000420646 TNFRSF13BO14836 293 aaPredicted RBP7.17□□□□□ -1.26
SNCA-206ENST00000420646 CD1BP29016 333 aa7.17□□□□□ -1.26
SNCA-206ENST00000420646 SPCS3P61009 180 aa7.17□□□□□ -1.26
SNCA-206ENST00000420646 TMEM41BQ5BJD5 291 aa7.17□□□□□ -1.26
SNCA-206ENST00000420646 LRRC10Q5BKY1 277 aa7.17□□□□□ -1.26
SNCA-206ENST00000420646 COMMD1Q8N668 190 aa7.17□□□□□ -1.26
SNCA-206ENST00000420646 OR10X1Q8NGY0 326 aa7.17□□□□□ -1.26
SNCA-206ENST00000420646 CORO2AQ92828 525 aa7.17□□□□□ -1.26
SNCA-206ENST00000420646 TMEM204Q9BSN7 226 aa7.17□□□□□ -1.26
SNCA-206ENST00000420646 VSTM5A8MXK1 200 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 OR8U8P0C7N1 319 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 KIAA0141Q14154 515 aaPredicted RBP7.16□□□□□ -1.26
SNCA-206ENST00000420646 ZNF343Q6P1L6 599 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 HEPN1Q6WQI6 88 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 ZNF429Q86V71 674 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 C11orf42Q8N5U0 333 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 TCTEX1D1Q8N7M0 179 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 LFNGQ8NES3 379 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 C1orf159Q96HA4 380 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 DIRC2Q96SL1 478 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 HIPK2Q9H2X6 1198 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 SEBOXQ9HB31 216 aaPredicted RBP7.16□□□□□ -1.26
SNCA-206ENST00000420646 TRBV23-1A0A0A0MS06 115 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 A0A1W2PPR1 153 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 C15orf61A6NNL5 157 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 NDUFS7O75251 213 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 CA2P00918 260 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 SAA1P0DJI8 122 aaPredicted RBP7.16□□□□□ -1.26
SNCA-206ENST00000420646 THBS3P49746 956 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 UCNP55089 124 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 MIC13Q5XKP0 118 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 TREML4Q6UXN2 200 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 RAB24Q969Q5 203 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 PINX1Q96BK5 328 aaKnown RBP7.16□□□□□ -1.26
SNCA-206ENST00000420646 RAB39BQ96DA2 213 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 CIB3Q96Q77 187 aaPredicted RBP7.16□□□□□ -1.26
SNCA-206ENST00000420646 GAL3ST2Q9H3Q3 398 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 TPSG1Q9NRR2 321 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 OR51B2Q9Y5P1 312 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 RBFOX2O43251 390 aaKnown RBP eCLIP7.16□□□□□ -1.26
SNCA-206ENST00000420646 SOD3P08294 240 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 GATA2P23769 480 aaPredicted RBP7.16□□□□□ -1.26
SNCA-206ENST00000420646 SERF2P84101 59 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 ZNF674Q2M3X9 581 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 C19orf35Q6ZS72 473 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 ST6GALNAC3Q8NDV1 305 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 PSMG3Q9BT73 122 aaPredicted RBP7.16□□□□□ -1.26
SNCA-206ENST00000420646 LINC00574Q9H8X3 128 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 MLXQ9UH92 298 aa7.16□□□□□ -1.26
SNCA-206ENST00000420646 LOC102723971A0A1B0GUV8 181 aa7.15□□□□□ -1.26
SNCA-206ENST00000420646 B9A039 149 aa7.15□□□□□ -1.26
SNCA-206ENST00000420646 J3QR06 171 aa7.15□□□□□ -1.26
SNCA-206ENST00000420646 ENSAO43768 121 aaKnown RBP7.15□□□□□ -1.26
SNCA-206ENST00000420646 BCL2P10415 239 aa7.15□□□□□ -1.26
SNCA-206ENST00000420646 COX7A1P24310 79 aa7.15□□□□□ -1.26
SNCA-206ENST00000420646 LGALS4P56470 323 aa7.15□□□□□ -1.26
SNCA-206ENST00000420646 UBE2G2P60604 165 aa7.15□□□□□ -1.26
SNCA-206ENST00000420646 GNB2P62879 340 aa7.15□□□□□ -1.26
SNCA-206ENST00000420646 DLK1P80370 383 aa7.15□□□□□ -1.26
SNCA-206ENST00000420646 ARSJQ5FYB0 599 aaPredicted RBP7.15□□□□□ -1.26
SNCA-206ENST00000420646 ZNF506Q5JVG8 444 aa7.15□□□□□ -1.26
SNCA-206ENST00000420646 ZNF709Q8N972 641 aa7.15□□□□□ -1.26
SNCA-206ENST00000420646 HARBI1Q96MB7 349 aa7.15□□□□□ -1.26
SNCA-206ENST00000420646 TMEM14BQ9NUH8 114 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms