RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 B3GALNT1O75752 331 aa14.49□□□□□ -0.09
PTCD3-204ENST00000418628 PF4V1P10720 104 aa14.49□□□□□ -0.09
PTCD3-204ENST00000418628 RPL27AP46776 148 aaKnown RBP14.49□□□□□ -0.09
PTCD3-204ENST00000418628 FHL3Q13643 280 aa14.49□□□□□ -0.09
PTCD3-204ENST00000418628 KLK9Q2XQG4 91 aa14.49□□□□□ -0.09
PTCD3-204ENST00000418628 C8orf86Q6ZUL3 223 aa14.49□□□□□ -0.09
PTCD3-204ENST00000418628 P2RX4Q99571 388 aa14.49□□□□□ -0.09
PTCD3-204ENST00000418628 SPIN2AQ99865 258 aa14.49□□□□□ -0.09
PTCD3-204ENST00000418628 SPIN2BQ9BPZ2 258 aa14.49□□□□□ -0.09
PTCD3-204ENST00000418628 SLA2Q9H6Q3 261 aa14.49□□□□□ -0.09
PTCD3-204ENST00000418628 MCUBQ9NWR8 336 aa14.49□□□□□ -0.09
PTCD3-204ENST00000418628 COPZ2Q9P299 210 aa14.49□□□□□ -0.09
PTCD3-204ENST00000418628 KLK9Q9UKQ9 250 aa14.49□□□□□ -0.09
PTCD3-204ENST00000418628 C14orf166Q9Y224 244 aaKnown RBP14.49□□□□□ -0.09
PTCD3-204ENST00000418628 C3orf85A0A1B0GTC6 90 aa14.48□□□□□ -0.09
PTCD3-204ENST00000418628 CRYM-AS1A6NIL9 109 aa14.48□□□□□ -0.09
PTCD3-204ENST00000418628 I3L521 148 aa14.48□□□□□ -0.09
PTCD3-204ENST00000418628 ACTL6BO94805 426 aa14.48□□□□□ -0.09
PTCD3-204ENST00000418628 OR9G9P0C7N8 305 aa14.48□□□□□ -0.09
PTCD3-204ENST00000418628 MYOD1P15172 320 aa14.48□□□□□ -0.09
PTCD3-204ENST00000418628 G6PCP35575 357 aa14.48□□□□□ -0.09
PTCD3-204ENST00000418628 OR2B8PP59922 312 aa14.48□□□□□ -0.09
PTCD3-204ENST00000418628 ERVK-16P61578 105 aa14.48□□□□□ -0.09
PTCD3-204ENST00000418628 DMBX1Q8NFW5 382 aa14.48□□□□□ -0.09
PTCD3-204ENST00000418628 CASTOR1Q8WTX7 329 aa14.48□□□□□ -0.09
PTCD3-204ENST00000418628 NAA60Q9H7X0 242 aa14.48□□□□□ -0.09
PTCD3-204ENST00000418628 GNB4Q9HAV0 340 aa14.48□□□□□ -0.09
PTCD3-204ENST00000418628 KRASP01116 189 aa14.47□□□□□ -0.09
PTCD3-204ENST00000418628 IL7P13232 177 aa14.47□□□□□ -0.09
PTCD3-204ENST00000418628 TTC9CQ8N5M4 171 aa14.47□□□□□ -0.09
PTCD3-204ENST00000418628 LINC00482Q8N8I6 264 aa14.47□□□□□ -0.09
PTCD3-204ENST00000418628 WFDC9Q8NEX5 89 aa14.47□□□□□ -0.09
PTCD3-204ENST00000418628 GALNT14Q96FL9 552 aa14.47□□□□□ -0.09
PTCD3-204ENST00000418628 RAX2Q96IS3 184 aa14.47□□□□□ -0.09
PTCD3-204ENST00000418628 TMEM222Q9H0R3 208 aa14.47□□□□□ -0.09
PTCD3-204ENST00000418628 IGLC7A0M8Q6 106 aa14.46□□□□□ -0.09
PTCD3-204ENST00000418628 C15orf61A6NNL5 157 aa14.46□□□□□ -0.09
PTCD3-204ENST00000418628 NPIPB5A8MRT5 1133 aa14.46□□□□□ -0.09
PTCD3-204ENST00000418628 RBMXL2O75526 392 aaKnown RBP14.46□□□□□ -0.09
PTCD3-204ENST00000418628 IGKV1-5P01602 117 aa14.46□□□□□ -0.09
PTCD3-204ENST00000418628 APELAP0DMC3 54 aa14.46□□□□□ -0.09
PTCD3-204ENST00000418628 BTCP35070 178 aa14.46□□□□□ -0.09
PTCD3-204ENST00000418628 TRIQKQ629K1 86 aa14.46□□□□□ -0.09
PTCD3-204ENST00000418628 THOC7Q6I9Y2 204 aaKnown RBP14.46□□□□□ -0.09
PTCD3-204ENST00000418628 TMEM65Q6PI78 240 aa14.46□□□□□ -0.09
PTCD3-204ENST00000418628 OR5T1Q8NG75 326 aa14.46□□□□□ -0.09
PTCD3-204ENST00000418628 LHFPL5Q8TAF8 219 aa14.46□□□□□ -0.09
PTCD3-204ENST00000418628 GLYATL2Q8WU03 294 aa14.46□□□□□ -0.09
PTCD3-204ENST00000418628 SCGB3A2Q96PL1 93 aa14.46□□□□□ -0.09
PTCD3-204ENST00000418628 PHB2Q99623 299 aa14.46□□□□□ -0.09
PTCD3-204ENST00000418628 SRSF8Q9BRL6 282 aaKnown RBP14.46□□□□□ -0.09
PTCD3-204ENST00000418628 TMEM14BQ9NUH8 114 aa14.46□□□□□ -0.09
PTCD3-204ENST00000418628 TRBV9A0A0B4J1U6 114 aa14.45□□□□□ -0.1
PTCD3-204ENST00000418628 HMX3A6NHT5 357 aa14.45□□□□□ -0.1
PTCD3-204ENST00000418628 NUDT19A8MXV4 375 aa14.45□□□□□ -0.1
PTCD3-204ENST00000418628 CDS2O95674 445 aa14.45□□□□□ -0.1
PTCD3-204ENST00000418628 SERPINE2P07093 398 aa14.45□□□□□ -0.1
PTCD3-204ENST00000418628 CRYGCP07315 174 aa14.45□□□□□ -0.1
PTCD3-204ENST00000418628 OR5AC1P0C628 307 aa14.45□□□□□ -0.1
PTCD3-204ENST00000418628 MYCNOSP40205 109 aa14.45□□□□□ -0.1
PTCD3-204ENST00000418628 SUPT4H1P63272 117 aaKnown RBP14.45□□□□□ -0.1
PTCD3-204ENST00000418628 DEFB136Q30KP8 78 aa14.45□□□□□ -0.1
PTCD3-204ENST00000418628 ZNF57Q68EA5 555 aaPredicted RBP14.45□□□□□ -0.1
PTCD3-204ENST00000418628 TSC22D3Q99576 134 aa14.45□□□□□ -0.1
PTCD3-204ENST00000418628 ZNF257Q9Y2Q1 563 aa14.45□□□□□ -0.1
PTCD3-204ENST00000418628 NAP1L6A6NFF2 107 aa14.44□□□□□ -0.1
PTCD3-204ENST00000418628 DBX1A6NMT0 343 aa14.44□□□□□ -0.1
PTCD3-204ENST00000418628 LGALS1P09382 135 aaKnown RBP14.44□□□□□ -0.1
PTCD3-204ENST00000418628 CTRB1P17538 263 aa14.44□□□□□ -0.1
PTCD3-204ENST00000418628 TPPP2P59282 170 aa14.44□□□□□ -0.1
PTCD3-204ENST00000418628 SP6Q3SY56 376 aa14.44□□□□□ -0.1
PTCD3-204ENST00000418628 CTRB2Q6GPI1 263 aa14.44□□□□□ -0.1
PTCD3-204ENST00000418628 MRPL41Q8IXM3 137 aaKnown RBP14.44□□□□□ -0.1
PTCD3-204ENST00000418628 SLC25A21Q9BQT8 299 aaPredicted RBP14.44□□□□□ -0.1
PTCD3-204ENST00000418628 C7orf50Q9BRJ6 194 aaKnown RBP14.44□□□□□ -0.1
PTCD3-204ENST00000418628 CCDC32Q9BV29 185 aa14.44□□□□□ -0.1
PTCD3-204ENST00000418628 QTRT1Q9BXR0 403 aaKnown RBP14.44□□□□□ -0.1
PTCD3-204ENST00000418628 NDUFA4L2Q9NRX3 87 aa14.44□□□□□ -0.1
PTCD3-204ENST00000418628 MEGF8Q7Z7M0 2845 aa14.44□□□□□ -0.1
PTCD3-204ENST00000418628 TEX13DA0A0J9YY54 714 aaPredicted RBP14.43□□□□□ -0.1
PTCD3-204ENST00000418628 CCL24O00175 119 aa14.43□□□□□ -0.1
PTCD3-204ENST00000418628 PF4P02776 101 aa14.43□□□□□ -0.1
PTCD3-204ENST00000418628 TRGV3P03979 118 aa14.43□□□□□ -0.1
PTCD3-204ENST00000418628 AREGP15514 252 aa14.43□□□□□ -0.1
PTCD3-204ENST00000418628 RBMS2Q15434 407 aaKnown RBP14.43□□□□□ -0.1
PTCD3-204ENST00000418628 SLC25A42Q86VD7 318 aa14.43□□□□□ -0.1
PTCD3-204ENST00000418628 OR5B3Q8NH48 314 aa14.43□□□□□ -0.1
PTCD3-204ENST00000418628 TMEM56Q96MV1 263 aa14.43□□□□□ -0.1
PTCD3-204ENST00000418628 MS4A10Q96PG2 267 aa14.43□□□□□ -0.1
PTCD3-204ENST00000418628 COMMD5Q9GZQ3 224 aa14.43□□□□□ -0.1
PTCD3-204ENST00000418628 COA4Q9NYJ1 87 aa14.43□□□□□ -0.1
PTCD3-204ENST00000418628 PRNDQ9UKY0 176 aa14.43□□□□□ -0.1
PTCD3-204ENST00000418628 NSG2Q9Y328 171 aa14.43□□□□□ -0.1
PTCD3-204ENST00000418628 TMEM56-RWDD3S4R434 201 aa14.43□□□□□ -0.1
PTCD3-204ENST00000418628 A0A0G2JRQ6 117 aa14.42□□□□□ -0.1
PTCD3-204ENST00000418628 TEX50A0A1B0GTY4 177 aa14.42□□□□□ -0.1
PTCD3-204ENST00000418628 PSMB6P28072 239 aa14.42□□□□□ -0.1
PTCD3-204ENST00000418628 CD40LGP29965 261 aa14.42□□□□□ -0.1
PTCD3-204ENST00000418628 DHODHQ02127 395 aa14.42□□□□□ -0.1
PTCD3-204ENST00000418628 TMEM187Q14656 261 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms