RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 TBR1Q16650 682 aa17.1■□□□□ 0.33
AP1S3-205ENST00000415298 C1orf140Q5VVS0 124 aa17.1■□□□□ 0.33
AP1S3-205ENST00000415298 YRDCQ86U90 279 aaKnown RBP17.1■□□□□ 0.33
AP1S3-205ENST00000415298 OR5P3Q8WZ94 311 aa17.1■□□□□ 0.33
AP1S3-205ENST00000415298 CITED2Q99967 270 aaPredicted RBP17.1■□□□□ 0.33
AP1S3-205ENST00000415298 MS4A5Q9H3V2 200 aa17.1■□□□□ 0.33
AP1S3-205ENST00000415298 ELOVL3Q9HB03 270 aa17.1■□□□□ 0.33
AP1S3-205ENST00000415298 DECR2Q9NUI1 292 aa17.1■□□□□ 0.33
AP1S3-205ENST00000415298 LRP5LA4QPB2 252 aa17.1■□□□□ 0.33
AP1S3-205ENST00000415298 SNU13P55769 128 aaKnown RBP17.1■□□□□ 0.33
AP1S3-205ENST00000415298 SP6Q3SY56 376 aa17.1■□□□□ 0.33
AP1S3-205ENST00000415298 FADS6Q8N9I5 356 aa17.1■□□□□ 0.33
AP1S3-205ENST00000415298 KCNG3Q8TAE7 436 aa17.1■□□□□ 0.33
AP1S3-205ENST00000415298 RCHY1Q96PM5 261 aa17.1■□□□□ 0.33
AP1S3-205ENST00000415298 ST6GALNAC5Q9BVH7 336 aa17.1■□□□□ 0.33
AP1S3-205ENST00000415298 FBLN5Q9UBX5 448 aa17.1■□□□□ 0.33
AP1S3-205ENST00000415298 SPCS1Q9Y6A9 102 aa17.1■□□□□ 0.33
AP1S3-205ENST00000415298 SNAI2O43623 268 aa17.09■□□□□ 0.33
AP1S3-205ENST00000415298 SP1P08047 785 aa17.09■□□□□ 0.33
AP1S3-205ENST00000415298 IGLV3-32A0A0A0MS00 114 aa17.09■□□□□ 0.33
AP1S3-205ENST00000415298 TRBV9A0A0B4J1U6 114 aa17.09■□□□□ 0.33
AP1S3-205ENST00000415298 IGFL2Q6UWQ7 119 aa17.09■□□□□ 0.33
AP1S3-205ENST00000415298 SPATA12Q7Z6I5 190 aa17.09■□□□□ 0.33
AP1S3-205ENST00000415298 OR4F5Q8NH21 305 aa17.09■□□□□ 0.33
AP1S3-205ENST00000415298 VSIRQ9H7M9 311 aa17.09■□□□□ 0.33
AP1S3-205ENST00000415298 NAA60Q9H7X0 242 aa17.09■□□□□ 0.33
AP1S3-205ENST00000415298 ZNF286AQ9HBT8 521 aa17.09■□□□□ 0.33
AP1S3-205ENST00000415298 TMPRSS3P57727 454 aa17.08■□□□□ 0.33
AP1S3-205ENST00000415298 SCCPDHQ8NBX0 429 aa17.08■□□□□ 0.33
AP1S3-205ENST00000415298 PPP1R14AQ96A00 147 aa17.08■□□□□ 0.33
AP1S3-205ENST00000415298 VCX2Q9H322 139 aa17.08■□□□□ 0.33
AP1S3-205ENST00000415298 IL36GQ9NZH8 169 aa17.08■□□□□ 0.33
AP1S3-205ENST00000415298 A0A0G2JLM5 398 aa17.08■□□□□ 0.32
AP1S3-205ENST00000415298 EFNA2O43921 213 aa17.08■□□□□ 0.32
AP1S3-205ENST00000415298 CLDN17P56750 224 aa17.08■□□□□ 0.32
AP1S3-205ENST00000415298 LINC00114Q6XXX2 140 aa17.08■□□□□ 0.32
AP1S3-205ENST00000415298 NDFIP1Q9BT67 221 aa17.08■□□□□ 0.32
AP1S3-205ENST00000415298 CRYBB3P26998 211 aa17.07■□□□□ 0.32
AP1S3-205ENST00000415298 MDH2P40926 338 aaKnown RBP17.07■□□□□ 0.32
AP1S3-205ENST00000415298 ARFRP1Q13795 201 aa17.07■□□□□ 0.32
AP1S3-205ENST00000415298 TESK1Q15569 626 aa17.07■□□□□ 0.32
AP1S3-205ENST00000415298 ZNF766Q5HY98 468 aa17.07■□□□□ 0.32
AP1S3-205ENST00000415298 ODF3L1Q8IXM7 274 aa17.07■□□□□ 0.32
AP1S3-205ENST00000415298 FAM19A2Q8N3H0 131 aa17.07■□□□□ 0.32
AP1S3-205ENST00000415298 TSKUQ8WUA8 353 aa17.07■□□□□ 0.32
AP1S3-205ENST00000415298 FAM206AQ9NX38 181 aa17.07■□□□□ 0.32
AP1S3-205ENST00000415298 A6NDN8 102 aa17.07■□□□□ 0.32
AP1S3-205ENST00000415298 TMEM14DPA8MWL7 114 aa17.07■□□□□ 0.32
AP1S3-205ENST00000415298 GP1BBP13224 206 aa17.07■□□□□ 0.32
AP1S3-205ENST00000415298 USF1P22415 310 aaPredicted RBP17.07■□□□□ 0.32
AP1S3-205ENST00000415298 F2RP25116 425 aa17.07■□□□□ 0.32
AP1S3-205ENST00000415298 GPR183P32249 361 aa17.07■□□□□ 0.32
AP1S3-205ENST00000415298 FABP6P51161 128 aa17.07■□□□□ 0.32
AP1S3-205ENST00000415298 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.07■□□□□ 0.32
AP1S3-205ENST00000415298 OR8B3Q8NGG8 313 aa17.07■□□□□ 0.32
AP1S3-205ENST00000415298 LHX4Q969G2 390 aa17.07■□□□□ 0.32
AP1S3-205ENST00000415298 OR8B2Q96RD0 313 aa17.07■□□□□ 0.32
AP1S3-205ENST00000415298 NBEAQ8NFP9 2946 aa17.07■□□□□ 0.32
AP1S3-205ENST00000415298 MAP1BP46821 2468 aaKnown RBP17.07■□□□□ 0.32
AP1S3-205ENST00000415298 IGKV1D-42A0A075B6H8 117 aa17.06■□□□□ 0.32
AP1S3-205ENST00000415298 ZIC3O60481 467 aa17.06■□□□□ 0.32
AP1S3-205ENST00000415298 NTF3P20783 257 aa17.06■□□□□ 0.32
AP1S3-205ENST00000415298 ZNF90Q03938 601 aa17.06■□□□□ 0.32
AP1S3-205ENST00000415298 C5orf47Q569G3 176 aa17.06■□□□□ 0.32
AP1S3-205ENST00000415298 ACACBO00763 2458 aa17.06■□□□□ 0.32
AP1S3-205ENST00000415298 ZNF407Q9C0G0 2248 aa17.06■□□□□ 0.32
AP1S3-205ENST00000415298 A0A087X0K7 114 aa17.06■□□□□ 0.32
AP1S3-205ENST00000415298 A0A0A6YYD4 124 aa17.06■□□□□ 0.32
AP1S3-205ENST00000415298 SNURFLB1AK76 121 aa17.06■□□□□ 0.32
AP1S3-205ENST00000415298 ZNF841Q6ZN19 808 aa17.06■□□□□ 0.32
AP1S3-205ENST00000415298 C18orf32Q8TCD1 76 aa17.06■□□□□ 0.32
AP1S3-205ENST00000415298 NEIL1Q96FI4 390 aaPredicted RBP17.06■□□□□ 0.32
AP1S3-205ENST00000415298 FAM173AQ9BQD7 235 aa17.06■□□□□ 0.32
AP1S3-205ENST00000415298 SFXN3Q9BWM7 321 aa17.06■□□□□ 0.32
AP1S3-205ENST00000415298 CLCF1Q9UBD9 225 aa17.06■□□□□ 0.32
AP1S3-205ENST00000415298 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.05■□□□□ 0.32
AP1S3-205ENST00000415298 TMPRSS2O15393 492 aa17.05■□□□□ 0.32
AP1S3-205ENST00000415298 PSG2P11465 335 aa17.05■□□□□ 0.32
AP1S3-205ENST00000415298 UBE2G1P62253 170 aa17.05■□□□□ 0.32
AP1S3-205ENST00000415298 NEU4Q8WWR8 484 aaPredicted RBP17.05■□□□□ 0.32
AP1S3-205ENST00000415298 AMELYQ99218 206 aa17.05■□□□□ 0.32
AP1S3-205ENST00000415298 SOCS1O15524 211 aa17.05■□□□□ 0.32
AP1S3-205ENST00000415298 SSSCA1O60232 199 aa17.05■□□□□ 0.32
AP1S3-205ENST00000415298 RPS27P42677 84 aaKnown RBP17.05■□□□□ 0.32
AP1S3-205ENST00000415298 MEOX1P50221 254 aa17.05■□□□□ 0.32
AP1S3-205ENST00000415298 ANAPC13Q9BS18 74 aa17.05■□□□□ 0.32
AP1S3-205ENST00000415298 GP6Q9HCN6 339 aa17.05■□□□□ 0.32
AP1S3-205ENST00000415298 DNAJC13O75165 2243 aa17.04■□□□□ 0.32
AP1S3-205ENST00000415298 TMED7-TICAM2A0A0A6YYA0 188 aa17.04■□□□□ 0.32
AP1S3-205ENST00000415298 A0A1W2PPM0 123 aa17.04■□□□□ 0.32
AP1S3-205ENST00000415298 WISP2O76076 250 aa17.04■□□□□ 0.32
AP1S3-205ENST00000415298 IER3P46695 156 aa17.04■□□□□ 0.32
AP1S3-205ENST00000415298 SUMO3P55854 103 aaPredicted RBP17.04■□□□□ 0.32
AP1S3-205ENST00000415298 MEP1BQ16820 701 aa17.04■□□□□ 0.32
AP1S3-205ENST00000415298 SLC22A24Q8N4F4 322 aa17.04■□□□□ 0.32
AP1S3-205ENST00000415298 GNB1LQ9BYB4 327 aa17.04■□□□□ 0.32
AP1S3-205ENST00000415298 TTTY12Q9BZ98 90 aa17.04■□□□□ 0.32
AP1S3-205ENST00000415298 M0QXV9 152 aa17.04■□□□□ 0.32
AP1S3-205ENST00000415298 GRAMD2BQ96HH9 432 aa17.04■□□□□ 0.32
AP1S3-205ENST00000415298 UBE2J1Q9Y385 318 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms